RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 NPIPA3F8WFD2 350 aa22.08■■□□□ 1.13
NME3-206ENST00000564252 IGHG3P01860 377 aa22.08■■□□□ 1.13
NME3-206ENST00000564252 MTHFD2P13995 350 aa22.08■■□□□ 1.13
NME3-206ENST00000564252 MAGEA4P43358 317 aa22.08■■□□□ 1.13
NME3-206ENST00000564252 FOXO1Q12778 655 aa22.08■■□□□ 1.13
NME3-206ENST00000564252 MPEG1Q2M385 716 aa22.08■■□□□ 1.13
NME3-206ENST00000564252 GXYLT1Q4G148 440 aa22.08■■□□□ 1.13
NME3-206ENST00000564252 CCDC25Q86WR0 208 aa22.08■■□□□ 1.13
NME3-206ENST00000564252 TMEM251Q8N6I4 163 aa22.08■■□□□ 1.13
NME3-206ENST00000564252 C7orf57Q8NEG2 295 aa22.08■■□□□ 1.13
NME3-206ENST00000564252 NXNL1Q96CM4 212 aa22.08■■□□□ 1.13
NME3-206ENST00000564252 IL1RL2Q9HB29 575 aa22.08■■□□□ 1.13
NME3-206ENST00000564252 MCCC2Q9HCC0 563 aa22.08■■□□□ 1.13
NME3-206ENST00000564252 NPDC1Q9NQX5 325 aaPredicted RBP22.08■■□□□ 1.13
NME3-206ENST00000564252 PNPLA3Q9NST1 481 aa22.08■■□□□ 1.13
NME3-206ENST00000564252 SACM1LQ9NTJ5 587 aa22.08■■□□□ 1.13
NME3-206ENST00000564252 UTP11Q9Y3A2 253 aaKnown RBP22.08■■□□□ 1.13
NME3-206ENST00000564252 NKX2-6A6NCS4 301 aa22.07■■□□□ 1.12
NME3-206ENST00000564252 IGKV3-11P04433 115 aa22.07■■□□□ 1.12
NME3-206ENST00000564252 CCL3P10147 92 aa22.07■■□□□ 1.12
NME3-206ENST00000564252 COX7A2P14406 83 aa22.07■■□□□ 1.12
NME3-206ENST00000564252 EPB42P16452 691 aa22.07■■□□□ 1.12
NME3-206ENST00000564252 CAPN3P20807 821 aa22.07■■□□□ 1.12
NME3-206ENST00000564252 STX2P32856 288 aa22.07■■□□□ 1.12
NME3-206ENST00000564252 MAGEA5P43359 124 aa22.07■■□□□ 1.12
NME3-206ENST00000564252 NUP107P57740 925 aa22.07■■□□□ 1.12
NME3-206ENST00000564252 CAV1Q03135 178 aa22.07■■□□□ 1.12
NME3-206ENST00000564252 PMPCAQ10713 525 aa22.07■■□□□ 1.12
NME3-206ENST00000564252 SLAMF1Q13291 335 aa22.07■■□□□ 1.12
NME3-206ENST00000564252 NAB1Q13506 487 aa22.07■■□□□ 1.12
NME3-206ENST00000564252 TRADDQ15628 312 aa22.07■■□□□ 1.12
NME3-206ENST00000564252 PIGGQ5H8A4 983 aa22.07■■□□□ 1.12
NME3-206ENST00000564252 ZDHHC24Q6UX98 284 aa22.07■■□□□ 1.12
NME3-206ENST00000564252 DGAT2L6Q6ZPD8 337 aa22.07■■□□□ 1.12
NME3-206ENST00000564252 FAM47EQ6ZV65 393 aa22.07■■□□□ 1.12
NME3-206ENST00000564252 C9orf40Q8IXQ3 194 aa22.07■■□□□ 1.12
NME3-206ENST00000564252 CENPLQ8N0S6 344 aaPredicted RBP22.07■■□□□ 1.12
NME3-206ENST00000564252 FAM109AQ8N4B1 249 aa22.07■■□□□ 1.12
NME3-206ENST00000564252 HUS1BQ8NHY5 278 aa22.07■■□□□ 1.12
NME3-206ENST00000564252 NUBPLQ8TB37 319 aa22.07■■□□□ 1.12
NME3-206ENST00000564252 SENP5Q96HI0 755 aaPredicted RBP22.07■■□□□ 1.12
NME3-206ENST00000564252 DGAT2Q96PD7 388 aa22.07■■□□□ 1.12
NME3-206ENST00000564252 SMC6Q96SB8 1091 aa22.07■■□□□ 1.12
NME3-206ENST00000564252 UCK2Q9BZX2 261 aa22.07■■□□□ 1.12
NME3-206ENST00000564252 RPF2Q9H7B2 306 aaKnown RBP22.07■■□□□ 1.12
NME3-206ENST00000564252 DMRT3Q9NQL9 472 aa22.07■■□□□ 1.12
NME3-206ENST00000564252 ADGRE2Q9UHX3 823 aa22.07■■□□□ 1.12
NME3-206ENST00000564252 ATG4BQ9Y4P1 393 aa22.07■■□□□ 1.12
NME3-206ENST00000564252 A0A1B0GVC2 190 aa22.06■■□□□ 1.12
NME3-206ENST00000564252 OR14I1A6ND48 311 aa22.06■■□□□ 1.12
NME3-206ENST00000564252 FAM90A27PA6NNH2 459 aa22.06■■□□□ 1.12
NME3-206ENST00000564252 PLPP1O14494 284 aa22.06■■□□□ 1.12
NME3-206ENST00000564252 TOXO94900 526 aa22.06■■□□□ 1.12
NME3-206ENST00000564252 PIK3CBP42338 1070 aa22.06■■□□□ 1.12
NME3-206ENST00000564252 DNASE1L1P49184 302 aa22.06■■□□□ 1.12
NME3-206ENST00000564252 ASPHQ12797 758 aa22.06■■□□□ 1.12
NME3-206ENST00000564252 DDX39BQ13838 428 aaKnown RBP22.06■■□□□ 1.12
NME3-206ENST00000564252 HYAL4Q2M3T9 481 aa22.06■■□□□ 1.12
NME3-206ENST00000564252 ACAD11Q709F0 780 aa22.06■■□□□ 1.12
NME3-206ENST00000564252 TRILQ7L0X0 811 aa22.06■■□□□ 1.12
NME3-206ENST00000564252 CCDC71Q8IV32 467 aaPredicted RBP22.06■■□□□ 1.12
NME3-206ENST00000564252 TEX9Q8N6V9 391 aa22.06■■□□□ 1.12
NME3-206ENST00000564252 OR5M9Q8NGP3 310 aa22.06■■□□□ 1.12
NME3-206ENST00000564252 OR5M3Q8NGP4 307 aa22.06■■□□□ 1.12
NME3-206ENST00000564252 KCTD4Q8WVF5 259 aa22.06■■□□□ 1.12
NME3-206ENST00000564252 RGMAQ96B86 450 aa22.06■■□□□ 1.12
NME3-206ENST00000564252 PPWD1Q96BP3 646 aaKnown RBP22.06■■□□□ 1.12
NME3-206ENST00000564252 MS4A12Q9NXJ0 267 aa22.06■■□□□ 1.12
NME3-206ENST00000564252 TUBA8Q9NY65 449 aaPredicted RBP22.06■■□□□ 1.12
NME3-206ENST00000564252 ITGB1BP2Q9UKP3 347 aa22.06■■□□□ 1.12
NME3-206ENST00000564252 TSC22D4Q9Y3Q8 395 aa22.06■■□□□ 1.12
NME3-206ENST00000564252 INTS1Q8N201 2190 aaKnown RBP22.05■■□□□ 1.12
NME3-206ENST00000564252 HRKO00198 91 aa22.05■■□□□ 1.12
NME3-206ENST00000564252 P04436 131 aa22.05■■□□□ 1.12
NME3-206ENST00000564252 RAP1GDS1P52306 607 aa22.05■■□□□ 1.12
NME3-206ENST00000564252 HNRNPH2P55795 449 aaKnown RBP22.05■■□□□ 1.12
NME3-206ENST00000564252 IRF9Q00978 393 aa22.05■■□□□ 1.12
NME3-206ENST00000564252 TNFRSF17Q02223 184 aa22.05■■□□□ 1.12
NME3-206ENST00000564252 FOLH1Q04609 750 aa22.05■■□□□ 1.12
NME3-206ENST00000564252 BIKQ13323 160 aa22.05■■□□□ 1.12
NME3-206ENST00000564252 ZNF791Q3KP31 576 aaPredicted RBP22.05■■□□□ 1.12
NME3-206ENST00000564252 C18orf63Q68DL7 685 aa22.05■■□□□ 1.12
NME3-206ENST00000564252 ADGRD1Q6QNK2 874 aa22.05■■□□□ 1.12
NME3-206ENST00000564252 GPR180Q86V85 440 aa22.05■■□□□ 1.12
NME3-206ENST00000564252 ZCCHC7Q8N3Z6 543 aaKnown RBP22.05■■□□□ 1.12
NME3-206ENST00000564252 RHEBL1Q8TAI7 183 aa22.05■■□□□ 1.12
NME3-206ENST00000564252 TANKQ92844 425 aa22.05■■□□□ 1.12
NME3-206ENST00000564252 MTERF1Q99551 399 aaKnown RBP22.05■■□□□ 1.12
NME3-206ENST00000564252 ZNF717Q9BY31 904 aaPredicted RBP22.05■■□□□ 1.12
NME3-206ENST00000564252 SH2D2AQ9NP31 389 aa22.05■■□□□ 1.12
NME3-206ENST00000564252 SEMA4BQ9NPR2 832 aaPredicted RBP22.05■■□□□ 1.12
NME3-206ENST00000564252 PHF11Q9UIL8 331 aa22.05■■□□□ 1.12
NME3-206ENST00000564252 ACOT9Q9Y305 439 aa22.05■■□□□ 1.12
NME3-206ENST00000564252 SYCE1LA8MT33 242 aa22.04■■□□□ 1.12
NME3-206ENST00000564252 BCKDKO14874 412 aa22.04■■□□□ 1.12
NME3-206ENST00000564252 PRKRAO75569 313 aaKnown RBP22.04■■□□□ 1.12
NME3-206ENST00000564252 NADKO95544 446 aaPredicted RBP22.04■■□□□ 1.12
NME3-206ENST00000564252 CELA3AP09093 270 aa22.04■■□□□ 1.12
NME3-206ENST00000564252 ACVR2AP27037 513 aa22.04■■□□□ 1.12
NME3-206ENST00000564252 MSX1P28360 303 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms