RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 SLC25A25Q6KCM7 469 aa28.61■■■□□ 2.17
CMTM4-204ENST00000563952 HSDL2Q6YN16 418 aa28.61■■■□□ 2.17
CMTM4-204ENST00000563952 C7orf57Q8NEG2 295 aa28.61■■■□□ 2.17
CMTM4-204ENST00000563952 MYRIPQ8NFW9 859 aa28.61■■■□□ 2.17
CMTM4-204ENST00000563952 SLC2A12Q8TD20 617 aa28.61■■■□□ 2.17
CMTM4-204ENST00000563952 PPWD1Q96BP3 646 aaKnown RBP28.61■■■□□ 2.17
CMTM4-204ENST00000563952 ZNF382Q96SR6 550 aa28.61■■■□□ 2.17
CMTM4-204ENST00000563952 WDR41Q9HAD4 459 aa28.61■■■□□ 2.17
CMTM4-204ENST00000563952 OSGIN2Q9Y236 505 aa28.61■■■□□ 2.17
CMTM4-204ENST00000563952 ARHGAP10A1A4S6 786 aa28.6■■■□□ 2.17
CMTM4-204ENST00000563952 WASHC1A8K0Z3 465 aa28.6■■■□□ 2.17
CMTM4-204ENST00000563952 CDK2AP1O14519 115 aa28.6■■■□□ 2.17
CMTM4-204ENST00000563952 ZNF500O60304 480 aaPredicted RBP28.6■■■□□ 2.17
CMTM4-204ENST00000563952 AIFM1O95831 613 aa28.6■■■□□ 2.17
CMTM4-204ENST00000563952 DDAH2O95865 285 aa28.6■■■□□ 2.17
CMTM4-204ENST00000563952 KLK1P06870 262 aa28.6■■■□□ 2.17
CMTM4-204ENST00000563952 MST1P26927 711 aa28.6■■■□□ 2.17
CMTM4-204ENST00000563952 TDGF1P3P51864 188 aa28.6■■■□□ 2.17
CMTM4-204ENST00000563952 RASA2Q15283 850 aa28.6■■■□□ 2.17
CMTM4-204ENST00000563952 C16orf47Q6ZP98 133 aaPredicted RBP28.6■■■□□ 2.17
CMTM4-204ENST00000563952 SH2D5Q6ZV89 423 aa28.6■■■□□ 2.17
CMTM4-204ENST00000563952 GPRIN3Q6ZVF9 776 aa28.6■■■□□ 2.17
CMTM4-204ENST00000563952 GALNTL5Q7Z4T8 443 aa28.6■■■□□ 2.17
CMTM4-204ENST00000563952 TMEM156Q8N614 296 aa28.6■■■□□ 2.17
CMTM4-204ENST00000563952 L3HYPDHQ96EM0 354 aa28.6■■■□□ 2.17
CMTM4-204ENST00000563952 RBM18Q96H35 190 aaKnown RBP28.6■■■□□ 2.17
CMTM4-204ENST00000563952 HBEGFQ99075 208 aa28.6■■■□□ 2.17
CMTM4-204ENST00000563952 SVILO95425 2214 aa28.59■■■□□ 2.17
CMTM4-204ENST00000563952 SLU7O95391 586 aaKnown RBP28.59■■■□□ 2.17
CMTM4-204ENST00000563952 MLYCDO95822 493 aa28.59■■■□□ 2.17
CMTM4-204ENST00000563952 MYL2P10916 166 aa28.59■■■□□ 2.17
CMTM4-204ENST00000563952 PLIN5Q00G26 463 aa28.59■■■□□ 2.17
CMTM4-204ENST00000563952 TCHHL1Q5QJ38 904 aaPredicted RBP28.59■■■□□ 2.17
CMTM4-204ENST00000563952 CCNYL2Q5T2Q4 361 aa28.59■■■□□ 2.17
CMTM4-204ENST00000563952 PAGE2Q7Z2X7 111 aa28.59■■■□□ 2.17
CMTM4-204ENST00000563952 CCNYL1Q8N7R7 359 aa28.59■■■□□ 2.17
CMTM4-204ENST00000563952 OR2W6PQ8NHA6 318 aa28.59■■■□□ 2.17
CMTM4-204ENST00000563952 SSC4DQ8WTU2 575 aa28.59■■■□□ 2.17
CMTM4-204ENST00000563952 UCN3Q969E3 161 aa28.59■■■□□ 2.17
CMTM4-204ENST00000563952 TMEM125Q96AQ2 219 aa28.59■■■□□ 2.17
CMTM4-204ENST00000563952 TRIM45Q9H8W5 580 aaPredicted RBP28.59■■■□□ 2.17
CMTM4-204ENST00000563952 COPS7AQ9UBW8 275 aa28.59■■■□□ 2.17
CMTM4-204ENST00000563952 NOL12Q9UGY1 213 aaKnown RBP eCLIP28.59■■■□□ 2.17
CMTM4-204ENST00000563952 V9GYY5 206 aaPredicted RBP28.59■■■□□ 2.17
CMTM4-204ENST00000563952 LRRK2Q5S007 2527 aa28.58■■■□□ 2.17
CMTM4-204ENST00000563952 TLDC2A0PJX2 215 aa28.58■■■□□ 2.17
CMTM4-204ENST00000563952 MANBAO00462 879 aa28.58■■■□□ 2.17
CMTM4-204ENST00000563952 CDH16O75309 829 aa28.58■■■□□ 2.17
CMTM4-204ENST00000563952 ALOX15P16050 662 aaPredicted RBP28.58■■■□□ 2.17
CMTM4-204ENST00000563952 CCT5P48643 541 aa28.58■■■□□ 2.17
CMTM4-204ENST00000563952 SSR4P51571 173 aa28.58■■■□□ 2.17
CMTM4-204ENST00000563952 ZYG11AQ6WRX3 759 aa28.58■■■□□ 2.17
CMTM4-204ENST00000563952 DGAT2L6Q6ZPD8 337 aa28.58■■■□□ 2.17
CMTM4-204ENST00000563952 ZNF227Q86WZ6 799 aa28.58■■■□□ 2.17
CMTM4-204ENST00000563952 METTL4Q8N3J2 472 aa28.58■■■□□ 2.17
CMTM4-204ENST00000563952 DOK4Q8TEW6 326 aa28.58■■■□□ 2.17
CMTM4-204ENST00000563952 BRF2Q9HAW0 419 aa28.58■■■□□ 2.17
CMTM4-204ENST00000563952 TEX10Q9NXF1 929 aaPredicted RBP28.58■■■□□ 2.17
CMTM4-204ENST00000563952 ERRFI1Q9UJM3 462 aaPredicted RBP28.58■■■□□ 2.17
CMTM4-204ENST00000563952 ADAM29Q9UKF5 820 aa28.58■■■□□ 2.17
CMTM4-204ENST00000563952 STK38LQ9Y2H1 464 aa28.58■■■□□ 2.17
CMTM4-204ENST00000563952 YARS2Q9Y2Z4 477 aaKnown RBP28.58■■■□□ 2.17
CMTM4-204ENST00000563952 TMEM200CA6NKL6 621 aa28.57■■■□□ 2.16
CMTM4-204ENST00000563952 G3V2L1 256 aa28.57■■■□□ 2.16
CMTM4-204ENST00000563952 WWP2O00308 870 aa28.57■■■□□ 2.16
CMTM4-204ENST00000563952 DYRK3O43781 588 aa28.57■■■□□ 2.16
CMTM4-204ENST00000563952 NME2P1O60361 137 aa28.57■■■□□ 2.16
CMTM4-204ENST00000563952 OR10H2O60403 315 aa28.57■■■□□ 2.16
CMTM4-204ENST00000563952 OR2J2O76002 312 aa28.57■■■□□ 2.16
CMTM4-204ENST00000563952 GPR75O95800 540 aa28.57■■■□□ 2.16
CMTM4-204ENST00000563952 KRT6AP02538 564 aa28.57■■■□□ 2.16
CMTM4-204ENST00000563952 PROCP04070 461 aa28.57■■■□□ 2.16
CMTM4-204ENST00000563952 KRT6BP04259 564 aa28.57■■■□□ 2.16
CMTM4-204ENST00000563952 NME2P22392 152 aa28.57■■■□□ 2.16
CMTM4-204ENST00000563952 HMOX2P30519 316 aa28.57■■■□□ 2.16
CMTM4-204ENST00000563952 KRT6CP48668 564 aa28.57■■■□□ 2.16
CMTM4-204ENST00000563952 KCNK10P57789 538 aa28.57■■■□□ 2.16
CMTM4-204ENST00000563952 LCP2Q13094 533 aa28.57■■■□□ 2.16
CMTM4-204ENST00000563952 BIKQ13323 160 aa28.57■■■□□ 2.16
CMTM4-204ENST00000563952 GFRALQ6UXV0 394 aa28.57■■■□□ 2.16
CMTM4-204ENST00000563952 COMMD6Q7Z4G1 85 aa28.57■■■□□ 2.16
CMTM4-204ENST00000563952 PNPLA5Q7Z6Z6 429 aaPredicted RBP28.57■■■□□ 2.16
CMTM4-204ENST00000563952 CYP4Z2PQ8N1L4 340 aa28.57■■■□□ 2.16
CMTM4-204ENST00000563952 FAM98AQ8NCA5 519 aaKnown RBP28.57■■■□□ 2.16
CMTM4-204ENST00000563952 ZNF721Q8TF20 911 aa28.57■■■□□ 2.16
CMTM4-204ENST00000563952 CCDC126Q96EE4 140 aa28.57■■■□□ 2.16
CMTM4-204ENST00000563952 MYOTQ9UBF9 498 aa28.57■■■□□ 2.16
CMTM4-204ENST00000563952 GRID1Q9ULK0 1009 aa28.57■■■□□ 2.16
CMTM4-204ENST00000563952 SLC5A6Q9Y289 635 aa28.57■■■□□ 2.16
CMTM4-204ENST00000563952 COL12A1Q99715 3063 aa28.57■■■□□ 2.16
CMTM4-204ENST00000563952 USP9XQ93008 2570 aaPredicted RBP28.57■■■□□ 2.16
CMTM4-204ENST00000563952 HECTD1Q9ULT8 2610 aa28.56■■■□□ 2.16
CMTM4-204ENST00000563952 COPEO14579 308 aa28.56■■■□□ 2.16
CMTM4-204ENST00000563952 RNF224P0DH78 156 aa28.56■■■□□ 2.16
CMTM4-204ENST00000563952 KRT4P19013 534 aa28.56■■■□□ 2.16
CMTM4-204ENST00000563952 CRHR1P34998 444 aa28.56■■■□□ 2.16
CMTM4-204ENST00000563952 CCDC153Q494R4 210 aa28.56■■■□□ 2.16
CMTM4-204ENST00000563952 OR52E8Q6IFG1 317 aa28.56■■■□□ 2.16
CMTM4-204ENST00000563952 ZGRF1Q86YA3 2104 aa28.56■■■□□ 2.16
CMTM4-204ENST00000563952 C4orf33Q8N1A6 199 aa28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms