RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 RASAL1O95294 804 aa12.49□□□□□ -0.41
CLK3-213ENST00000563842 ESRRBO95718 433 aa12.49□□□□□ -0.41
CLK3-213ENST00000563842 F10P00742 488 aa12.49□□□□□ -0.41
CLK3-213ENST00000563842 CRYABP02511 175 aaKnown RBP12.49□□□□□ -0.41
CLK3-213ENST00000563842 STT3AP46977 705 aa12.49□□□□□ -0.41
CLK3-213ENST00000563842 MLF1P58340 268 aa12.49□□□□□ -0.41
CLK3-213ENST00000563842 IGLV3-21P80748 117 aaPredicted RBP12.49□□□□□ -0.41
CLK3-213ENST00000563842 PLIN5Q00G26 463 aa12.49□□□□□ -0.41
CLK3-213ENST00000563842 TUBA3CQ13748 450 aa12.49□□□□□ -0.41
CLK3-213ENST00000563842 ZNF766Q5HY98 468 aa12.49□□□□□ -0.41
CLK3-213ENST00000563842 CCNYL2Q5T2Q4 361 aa12.49□□□□□ -0.41
CLK3-213ENST00000563842 C18orf63Q68DL7 685 aa12.49□□□□□ -0.41
CLK3-213ENST00000563842 OR52E8Q6IFG1 317 aa12.49□□□□□ -0.41
CLK3-213ENST00000563842 TUBA3EQ6PEY2 450 aa12.49□□□□□ -0.41
CLK3-213ENST00000563842 TRABD2AQ86V40 505 aa12.49□□□□□ -0.41
CLK3-213ENST00000563842 C4orf33Q8N1A6 199 aa12.49□□□□□ -0.41
CLK3-213ENST00000563842 TMEM178AQ8NBL3 297 aa12.49□□□□□ -0.41
CLK3-213ENST00000563842 FAM98AQ8NCA5 519 aaKnown RBP12.49□□□□□ -0.41
CLK3-213ENST00000563842 OR8K3Q8NH51 312 aa12.49□□□□□ -0.41
CLK3-213ENST00000563842 OR2W6PQ8NHA6 318 aa12.49□□□□□ -0.41
CLK3-213ENST00000563842 DNAJB8Q8NHS0 232 aa12.49□□□□□ -0.41
CLK3-213ENST00000563842 FAR1Q8WVX9 515 aa12.49□□□□□ -0.41
CLK3-213ENST00000563842 ANKRD9Q96BM1 317 aaPredicted RBP12.49□□□□□ -0.41
CLK3-213ENST00000563842 C19orf60Q96EN9 201 aa12.49□□□□□ -0.41
CLK3-213ENST00000563842 C5orf34Q96MH7 638 aa12.49□□□□□ -0.41
CLK3-213ENST00000563842 MRPL1Q9BYD6 325 aaKnown RBP12.49□□□□□ -0.41
CLK3-213ENST00000563842 MID1IP1Q9NPA3 183 aa12.49□□□□□ -0.41
CLK3-213ENST00000563842 VPS29Q9UBQ0 182 aa12.49□□□□□ -0.41
CLK3-213ENST00000563842 LGALS13Q9UHV8 139 aa12.49□□□□□ -0.41
CLK3-213ENST00000563842 ZNF225Q9UK10 706 aa12.49□□□□□ -0.41
CLK3-213ENST00000563842 POLEQ07864 2286 aa12.49□□□□□ -0.41
CLK3-213ENST00000563842 DOPEY2Q9Y3R5 2298 aa12.49□□□□□ -0.41
CLK3-213ENST00000563842 GTF3C1Q12789 2109 aa12.49□□□□□ -0.41
CLK3-213ENST00000563842 EML6Q6ZMW3 1958 aa12.49□□□□□ -0.41
CLK3-213ENST00000563842 A0A1B0GTL3 188 aa12.48□□□□□ -0.41
CLK3-213ENST00000563842 FOXO6A8MYZ6 492 aa12.48□□□□□ -0.41
CLK3-213ENST00000563842 TCP11X1B4DZS4 312 aa12.48□□□□□ -0.41
CLK3-213ENST00000563842 MANBAO00462 879 aa12.48□□□□□ -0.41
CLK3-213ENST00000563842 FGF17O60258 216 aa12.48□□□□□ -0.41
CLK3-213ENST00000563842 GPR75O95800 540 aa12.48□□□□□ -0.41
CLK3-213ENST00000563842 KLK1P06870 262 aa12.48□□□□□ -0.41
CLK3-213ENST00000563842 ALOX15P16050 662 aaPredicted RBP12.48□□□□□ -0.41
CLK3-213ENST00000563842 GNLYP22749 145 aa12.48□□□□□ -0.41
CLK3-213ENST00000563842 TPP2P29144 1249 aaPredicted RBP12.48□□□□□ -0.41
CLK3-213ENST00000563842 CD96P40200 585 aa12.48□□□□□ -0.41
CLK3-213ENST00000563842 CYB561P49447 251 aa12.48□□□□□ -0.41
CLK3-213ENST00000563842 GPR143P51810 404 aa12.48□□□□□ -0.41
CLK3-213ENST00000563842 MAPK12P53778 367 aa12.48□□□□□ -0.41
CLK3-213ENST00000563842 NAGLUP54802 743 aa12.48□□□□□ -0.41
CLK3-213ENST00000563842 TRA2BP62995 288 aaKnown RBP12.48□□□□□ -0.41
CLK3-213ENST00000563842 FOLH1Q04609 750 aa12.48□□□□□ -0.41
CLK3-213ENST00000563842 OR1C1Q15619 314 aa12.48□□□□□ -0.41
CLK3-213ENST00000563842 LIPMQ5VYY2 423 aa12.48□□□□□ -0.41
CLK3-213ENST00000563842 HSDL2Q6YN16 418 aa12.48□□□□□ -0.41
CLK3-213ENST00000563842 COMMD6Q7Z4G1 85 aa12.48□□□□□ -0.41
CLK3-213ENST00000563842 ST13P4Q8IZP2 240 aaPredicted RBP12.48□□□□□ -0.41
CLK3-213ENST00000563842 TMEM156Q8N614 296 aa12.48□□□□□ -0.41
CLK3-213ENST00000563842 AMER2Q8N7J2 671 aa12.48□□□□□ -0.41
CLK3-213ENST00000563842 ST6GALNAC3Q8NDV1 305 aa12.48□□□□□ -0.41
CLK3-213ENST00000563842 OR5L2Q8NGL0 311 aa12.48□□□□□ -0.41
CLK3-213ENST00000563842 GRHL3Q8TE85 626 aa12.48□□□□□ -0.41
CLK3-213ENST00000563842 PTPMT1Q8WUK0 201 aaPredicted RBP12.48□□□□□ -0.41
CLK3-213ENST00000563842 SREK1Q8WXA9 508 aaKnown RBP12.48□□□□□ -0.41
CLK3-213ENST00000563842 TMEM125Q96AQ2 219 aa12.48□□□□□ -0.41
CLK3-213ENST00000563842 APOPT1Q96IL0 206 aa12.48□□□□□ -0.41
CLK3-213ENST00000563842 SMC6Q96SB8 1091 aa12.48□□□□□ -0.41
CLK3-213ENST00000563842 NPAS2Q99743 824 aa12.48□□□□□ -0.41
CLK3-213ENST00000563842 TMEM109Q9BVC6 243 aa12.48□□□□□ -0.41
CLK3-213ENST00000563842 OR8D2Q9GZM6 311 aa12.48□□□□□ -0.41
CLK3-213ENST00000563842 GSTO2Q9H4Y5 243 aa12.48□□□□□ -0.41
CLK3-213ENST00000563842 FARSBQ9NSD9 589 aaKnown RBP12.48□□□□□ -0.41
CLK3-213ENST00000563842 RYDENQ9NUL5 291 aaKnown RBP12.48□□□□□ -0.41
CLK3-213ENST00000563842 OLAHQ9NV23 265 aa12.48□□□□□ -0.41
CLK3-213ENST00000563842 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.48□□□□□ -0.41
CLK3-213ENST00000563842 OXSMQ9NWU1 459 aa12.48□□□□□ -0.41
CLK3-213ENST00000563842 SENP1Q9P0U3 644 aa12.48□□□□□ -0.41
CLK3-213ENST00000563842 LRFN1Q9P244 771 aa12.48□□□□□ -0.41
CLK3-213ENST00000563842 RAB21Q9UL25 225 aa12.48□□□□□ -0.41
CLK3-213ENST00000563842 PSME2Q9UL46 239 aa12.48□□□□□ -0.41
CLK3-213ENST00000563842 YARS2Q9Y2Z4 477 aaKnown RBP12.48□□□□□ -0.41
CLK3-213ENST00000563842 PLLPQ9Y342 182 aa12.48□□□□□ -0.41
CLK3-213ENST00000563842 A0A1W2PR48 441 aa12.47□□□□□ -0.41
CLK3-213ENST00000563842 C1orf226A1L170 272 aa12.47□□□□□ -0.41
CLK3-213ENST00000563842 SERTM1A2A2V5 107 aa12.47□□□□□ -0.41
CLK3-213ENST00000563842 ANKUB1A6NFN9 424 aa12.47□□□□□ -0.41
CLK3-213ENST00000563842 OR10H2O60403 315 aa12.47□□□□□ -0.41
CLK3-213ENST00000563842 CRCPO75575 148 aa12.47□□□□□ -0.41
CLK3-213ENST00000563842 AIFM1O95831 613 aa12.47□□□□□ -0.41
CLK3-213ENST00000563842 GBAP04062 536 aa12.47□□□□□ -0.41
CLK3-213ENST00000563842 EDN3P14138 238 aa12.47□□□□□ -0.41
CLK3-213ENST00000563842 PIK3R1P27986 724 aa12.47□□□□□ -0.41
CLK3-213ENST00000563842 GALNSP34059 522 aa12.47□□□□□ -0.41
CLK3-213ENST00000563842 TRHRP34981 398 aaPredicted RBP12.47□□□□□ -0.41
CLK3-213ENST00000563842 HLCSP50747 726 aa12.47□□□□□ -0.41
CLK3-213ENST00000563842 ID2Q02363 134 aa12.47□□□□□ -0.41
CLK3-213ENST00000563842 NR6A1Q15406 480 aa12.47□□□□□ -0.41
CLK3-213ENST00000563842 SPIN4Q56A73 249 aa12.47□□□□□ -0.41
CLK3-213ENST00000563842 FHL5Q5TD97 284 aa12.47□□□□□ -0.41
CLK3-213ENST00000563842 FRMD7Q6ZUT3 714 aa12.47□□□□□ -0.41
CLK3-213ENST00000563842 CROCCP2Q86T23 111 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms