RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 MROH9Q5TGP6 573 aa15.94■□□□□ 0.14
VPS9D1-203ENST00000563798 TMEM211Q6ICI0 200 aa15.94■□□□□ 0.14
VPS9D1-203ENST00000563798 MRM1Q6IN84 353 aaKnown RBP15.94■□□□□ 0.14
VPS9D1-203ENST00000563798 C3P1Q6ZMU1 363 aa15.94■□□□□ 0.14
VPS9D1-203ENST00000563798 GK5Q6ZS86 529 aa15.94■□□□□ 0.14
VPS9D1-203ENST00000563798 GPR180Q86V85 440 aa15.94■□□□□ 0.14
VPS9D1-203ENST00000563798 CD163Q86VB7 1156 aa15.94■□□□□ 0.14
VPS9D1-203ENST00000563798 MARVELD2Q8N4S9 558 aa15.94■□□□□ 0.14
VPS9D1-203ENST00000563798 L3MBTL4Q8NA19 623 aa15.94■□□□□ 0.14
VPS9D1-203ENST00000563798 SENP5Q96HI0 755 aaPredicted RBP15.94■□□□□ 0.14
VPS9D1-203ENST00000563798 FAM173AQ9BQD7 235 aa15.94■□□□□ 0.14
VPS9D1-203ENST00000563798 CENPKQ9BS16 269 aa15.94■□□□□ 0.14
VPS9D1-203ENST00000563798 ZNF717Q9BY31 904 aaPredicted RBP15.94■□□□□ 0.14
VPS9D1-203ENST00000563798 TP63Q9H3D4 680 aaPredicted RBP15.94■□□□□ 0.14
VPS9D1-203ENST00000563798 COPS7AQ9UBW8 275 aa15.94■□□□□ 0.14
VPS9D1-203ENST00000563798 TNPO3Q9Y5L0 923 aaKnown RBP15.94■□□□□ 0.14
VPS9D1-203ENST00000563798 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.94■□□□□ 0.14
VPS9D1-203ENST00000563798 PKDREJQ9NTG1 2253 aa15.94■□□□□ 0.14
VPS9D1-203ENST00000563798 ADGRG4Q8IZF6 3080 aa15.93■□□□□ 0.14
VPS9D1-203ENST00000563798 A0A1B0GVC2 190 aa15.93■□□□□ 0.14
VPS9D1-203ENST00000563798 ACOT7O00154 380 aa15.93■□□□□ 0.14
VPS9D1-203ENST00000563798 SAP18O00422 153 aaKnown RBP15.93■□□□□ 0.14
VPS9D1-203ENST00000563798 PLPP1O14494 284 aa15.93■□□□□ 0.14
VPS9D1-203ENST00000563798 PROM1O43490 865 aa15.93■□□□□ 0.14
VPS9D1-203ENST00000563798 ALDOAP04075 364 aaKnown RBP15.93■□□□□ 0.14
VPS9D1-203ENST00000563798 TPOP07202 933 aa15.93■□□□□ 0.14
VPS9D1-203ENST00000563798 SSTR2P30874 369 aa15.93■□□□□ 0.14
VPS9D1-203ENST00000563798 TLX1P31314 330 aaPredicted RBP15.93■□□□□ 0.14
VPS9D1-203ENST00000563798 TNFRSF17Q02223 184 aa15.93■□□□□ 0.14
VPS9D1-203ENST00000563798 ID2Q02363 134 aa15.93■□□□□ 0.14
VPS9D1-203ENST00000563798 FOXO1Q12778 655 aa15.93■□□□□ 0.14
VPS9D1-203ENST00000563798 PFKFB4Q16877 469 aa15.93■□□□□ 0.14
VPS9D1-203ENST00000563798 ZNF750Q32MQ0 723 aa15.93■□□□□ 0.14
VPS9D1-203ENST00000563798 SLC22A16Q86VW1 577 aa15.93■□□□□ 0.14
VPS9D1-203ENST00000563798 SLC15A4Q8N697 577 aa15.93■□□□□ 0.14
VPS9D1-203ENST00000563798 SDCCAG3Q96C92 435 aa15.93■□□□□ 0.14
VPS9D1-203ENST00000563798 REPS1Q96D71 796 aa15.93■□□□□ 0.14
VPS9D1-203ENST00000563798 C14orf79Q96F83 325 aa15.93■□□□□ 0.14
VPS9D1-203ENST00000563798 RBM18Q96H35 190 aaKnown RBP15.93■□□□□ 0.14
VPS9D1-203ENST00000563798 FBXL20Q96IG2 436 aa15.93■□□□□ 0.14
VPS9D1-203ENST00000563798 ART5Q96L15 291 aa15.93■□□□□ 0.14
VPS9D1-203ENST00000563798 LURAP1Q96LR2 239 aa15.93■□□□□ 0.14
VPS9D1-203ENST00000563798 DGAT2Q96PD7 388 aa15.93■□□□□ 0.14
VPS9D1-203ENST00000563798 PELOQ9BRX2 385 aaKnown RBP15.93■□□□□ 0.14
VPS9D1-203ENST00000563798 SORBS1Q9BX66 1292 aaKnown RBP15.93■□□□□ 0.14
VPS9D1-203ENST00000563798 TTTY12Q9BZ98 90 aa15.93■□□□□ 0.14
VPS9D1-203ENST00000563798 ACSS3Q9H6R3 686 aa15.93■□□□□ 0.14
VPS9D1-203ENST00000563798 DDX31Q9H8H2 851 aaKnown RBP15.93■□□□□ 0.14
VPS9D1-203ENST00000563798 ACTR8Q9H981 624 aa15.93■□□□□ 0.14
VPS9D1-203ENST00000563798 IL1RL2Q9HB29 575 aa15.93■□□□□ 0.14
VPS9D1-203ENST00000563798 SH2D2AQ9NP31 389 aa15.93■□□□□ 0.14
VPS9D1-203ENST00000563798 COQ3Q9NZJ6 369 aa15.93■□□□□ 0.14
VPS9D1-203ENST00000563798 ATG4BQ9Y4P1 393 aa15.93■□□□□ 0.14
VPS9D1-203ENST00000563798 ANGPTL3Q9Y5C1 460 aa15.93■□□□□ 0.14
VPS9D1-203ENST00000563798 A0A096LPK6 155 aa15.92■□□□□ 0.14
VPS9D1-203ENST00000563798 A0A0A6YYD5 115 aa15.92■□□□□ 0.14
VPS9D1-203ENST00000563798 A0A0G2JMM0 328 aa15.92■□□□□ 0.14
VPS9D1-203ENST00000563798 A0A1W2PPB8 328 aa15.92■□□□□ 0.14
VPS9D1-203ENST00000563798 A0A1W2PRS3 328 aa15.92■□□□□ 0.14
VPS9D1-203ENST00000563798 OR14I1A6ND48 311 aa15.92■□□□□ 0.14
VPS9D1-203ENST00000563798 KIR3DP1A8MWS1 328 aa15.92■□□□□ 0.14
VPS9D1-203ENST00000563798 FOXE1O00358 373 aaPredicted RBP15.92■□□□□ 0.14
VPS9D1-203ENST00000563798 DYRK3O43781 588 aa15.92■□□□□ 0.14
VPS9D1-203ENST00000563798 CDC40O60508 579 aaKnown RBP eCLIP15.92■□□□□ 0.14
VPS9D1-203ENST00000563798 SH3BGRLO75368 114 aa15.92■□□□□ 0.14
VPS9D1-203ENST00000563798 GFAPP14136 432 aa15.92■□□□□ 0.14
VPS9D1-203ENST00000563798 GALNSP34059 522 aa15.92■□□□□ 0.14
VPS9D1-203ENST00000563798 BSGP35613 385 aa15.92■□□□□ 0.14
VPS9D1-203ENST00000563798 PIK3CGP48736 1102 aa15.92■□□□□ 0.14
VPS9D1-203ENST00000563798 RAP1GDS1P52306 607 aa15.92■□□□□ 0.14
VPS9D1-203ENST00000563798 HNRNPH2P55795 449 aaKnown RBP15.92■□□□□ 0.14
VPS9D1-203ENST00000563798 PHEXP78562 749 aa15.92■□□□□ 0.14
VPS9D1-203ENST00000563798 PLIN5Q00G26 463 aa15.92■□□□□ 0.14
VPS9D1-203ENST00000563798 CKAP4Q07065 602 aaKnown RBP15.92■□□□□ 0.14
VPS9D1-203ENST00000563798 SPRED3Q2MJR0 410 aa15.92■□□□□ 0.14
VPS9D1-203ENST00000563798 ZNF791Q3KP31 576 aaPredicted RBP15.92■□□□□ 0.14
VPS9D1-203ENST00000563798 LYPD8Q6UX82 237 aa15.92■□□□□ 0.14
VPS9D1-203ENST00000563798 OR4N5Q8IXE1 308 aa15.92■□□□□ 0.14
VPS9D1-203ENST00000563798 DND1Q8IYX4 353 aaKnown RBP15.92■□□□□ 0.14
VPS9D1-203ENST00000563798 ST13P4Q8IZP2 240 aaPredicted RBP15.92■□□□□ 0.14
VPS9D1-203ENST00000563798 C17orf53Q8N3J3 647 aaPredicted RBP15.92■□□□□ 0.14
VPS9D1-203ENST00000563798 RNF175Q8N4F7 328 aa15.92■□□□□ 0.14
VPS9D1-203ENST00000563798 WDR20Q8TBZ3 569 aa15.92■□□□□ 0.14
VPS9D1-203ENST00000563798 CA5BP1Q8WTZ4 195 aa15.92■□□□□ 0.14
VPS9D1-203ENST00000563798 ASB5Q8WWX0 329 aa15.92■□□□□ 0.14
VPS9D1-203ENST00000563798 ISL2Q96A47 359 aa15.92■□□□□ 0.14
VPS9D1-203ENST00000563798 MTERF1Q99551 399 aaKnown RBP15.92■□□□□ 0.14
VPS9D1-203ENST00000563798 LRRC1Q9BTT6 524 aa15.92■□□□□ 0.14
VPS9D1-203ENST00000563798 DEFB127Q9H1M4 99 aa15.92■□□□□ 0.14
VPS9D1-203ENST00000563798 SACM1LQ9NTJ5 587 aa15.92■□□□□ 0.14
VPS9D1-203ENST00000563798 LYARQ9NX58 379 aaKnown RBP15.92■□□□□ 0.14
VPS9D1-203ENST00000563798 ASB4Q9Y574 426 aa15.92■□□□□ 0.14
VPS9D1-203ENST00000563798 CACNA1CQ13936 2221 aa15.92■□□□□ 0.14
VPS9D1-203ENST00000563798 ESYT3A0FGR9 886 aa15.91■□□□□ 0.14
VPS9D1-203ENST00000563798 NADKO95544 446 aaPredicted RBP15.91■□□□□ 0.14
VPS9D1-203ENST00000563798 GPR75O95800 540 aa15.91■□□□□ 0.14
VPS9D1-203ENST00000563798 SNRPB2P08579 225 aaKnown RBP15.91■□□□□ 0.14
VPS9D1-203ENST00000563798 ALOX15P16050 662 aaPredicted RBP15.91■□□□□ 0.14
VPS9D1-203ENST00000563798 TYK2P29597 1187 aa15.91■□□□□ 0.14
VPS9D1-203ENST00000563798 PHBP35232 272 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms