RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 HS3ST6Q96QI5 342 aa9.49□□□□□ -0.89
SF3B3-204ENST00000563739 NPLQ9BXD5 320 aaPredicted RBP9.49□□□□□ -0.89
SF3B3-204ENST00000563739 LDAHQ9H6V9 325 aa9.49□□□□□ -0.89
SF3B3-204ENST00000563739 QPCTLQ9NXS2 382 aa9.49□□□□□ -0.89
SF3B3-204ENST00000563739 SAMD15Q9P1V8 674 aa9.49□□□□□ -0.89
SF3B3-204ENST00000563739 MTRF1LQ9UGC7 380 aaKnown RBP9.49□□□□□ -0.89
SF3B3-204ENST00000563739 TRMT6Q9UJA5 497 aaKnown RBP9.49□□□□□ -0.89
SF3B3-204ENST00000563739 PYCARDQ9ULZ3 195 aa9.49□□□□□ -0.89
SF3B3-204ENST00000563739 DAPP1Q9UN19 280 aa9.49□□□□□ -0.89
SF3B3-204ENST00000563739 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.48□□□□□ -0.89
SF3B3-204ENST00000563739 SH3D21A4FU49 640 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 CD8B2A6NJW9 211 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 C17orf105B2RV13 164 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 ZSCAN12O43309 604 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 ERI3O43414 337 aaKnown RBP9.48□□□□□ -0.89
SF3B3-204ENST00000563739 WIPF1O43516 503 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 LDB3O75112 727 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 P04436 131 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 FBXO45P0C2W1 286 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 CD22P20273 847 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 SLC6A12P48065 614 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 SKP1P63208 163 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 CDK16Q00536 496 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 SLC13A2Q13183 592 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 TRIP13Q15645 432 aaPredicted RBP9.48□□□□□ -0.89
SF3B3-204ENST00000563739 BBS9Q3SYG4 887 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 ARMC3Q5W041 872 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 VASNQ6EMK4 673 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 TTC27Q6P3X3 843 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 ABHD17CQ6PCB6 329 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 OPN5Q6U736 354 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 PRSS57Q6UWY2 283 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 SLCO4C1Q6ZQN7 724 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 C22orf34Q6ZV56 151 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 MAATS1Q7Z4T9 603 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 THOC6Q86W42 341 aaKnown RBP9.48□□□□□ -0.89
SF3B3-204ENST00000563739 KLHDC8AQ8IYD2 350 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 TMEM132CQ8N3T6 1108 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 RASGEF1CQ8N431 466 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 ZNF441Q8N8Z8 693 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 TRPV3Q8NET8 790 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 TRIM58Q8NG06 486 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 NUBPLQ8TB37 319 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 SPACA9Q96E40 222 aaPredicted RBP9.48□□□□□ -0.89
SF3B3-204ENST00000563739 DACH2Q96NX9 599 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 SERPINB12Q96P63 405 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 UGT2B28Q9BY64 529 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 ALOXE3Q9BYJ1 711 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 PRDM7Q9NQW5 492 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 ARL15Q9NXU5 204 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 EDARQ9UNE0 448 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 DTX4Q9Y2E6 619 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 SLC6A5Q9Y345 797 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 COMMD10Q9Y6G5 202 aa9.48□□□□□ -0.89
SF3B3-204ENST00000563739 SDR42E2A6NKP2 422 aa9.47□□□□□ -0.89
SF3B3-204ENST00000563739 AHRRA9YTQ3 701 aa9.47□□□□□ -0.89
SF3B3-204ENST00000563739 EEF1E1-BLOC1S5C9J1V9 151 aa9.47□□□□□ -0.89
SF3B3-204ENST00000563739 PFDN6O15212 129 aa9.47□□□□□ -0.89
SF3B3-204ENST00000563739 EEF1E1O43324 174 aaKnown RBP9.47□□□□□ -0.89
SF3B3-204ENST00000563739 FGF17O60258 216 aa9.47□□□□□ -0.89
SF3B3-204ENST00000563739 CTNSO60931 367 aa9.47□□□□□ -0.89
SF3B3-204ENST00000563739 GUCA1CO95843 209 aa9.47□□□□□ -0.89
SF3B3-204ENST00000563739 IL18BPO95998 194 aa9.47□□□□□ -0.89
SF3B3-204ENST00000563739 C1QAP02745 245 aa9.47□□□□□ -0.89
SF3B3-204ENST00000563739 HPNP05981 417 aa9.47□□□□□ -0.89
SF3B3-204ENST00000563739 CTSSP25774 331 aa9.47□□□□□ -0.89
SF3B3-204ENST00000563739 CDK9P50750 372 aaKnown RBP9.47□□□□□ -0.89
SF3B3-204ENST00000563739 AP1S2P56377 157 aa9.47□□□□□ -0.89
SF3B3-204ENST00000563739 BMPR2Q13873 1038 aa9.47□□□□□ -0.89
SF3B3-204ENST00000563739 CSHL1Q14406 222 aa9.47□□□□□ -0.89
SF3B3-204ENST00000563739 RBBP5Q15291 538 aaKnown RBP9.47□□□□□ -0.89
SF3B3-204ENST00000563739 HSP90AA5PQ58FG0 334 aa9.47□□□□□ -0.89
SF3B3-204ENST00000563739 NHSL2Q5HYW2 709 aa9.47□□□□□ -0.89
SF3B3-204ENST00000563739 SEL1L2Q5TEA6 688 aa9.47□□□□□ -0.89
SF3B3-204ENST00000563739 LRRC8EQ6NSJ5 796 aa9.47□□□□□ -0.89
SF3B3-204ENST00000563739 CAPN12Q6ZSI9 719 aa9.47□□□□□ -0.89
SF3B3-204ENST00000563739 MYO1HQ8N1T3 1032 aa9.47□□□□□ -0.89
SF3B3-204ENST00000563739 SLC44A1Q8WWI5 657 aa9.47□□□□□ -0.89
SF3B3-204ENST00000563739 MAPKAP1Q9BPZ7 522 aa9.47□□□□□ -0.89
SF3B3-204ENST00000563739 EXO5Q9H790 373 aa9.47□□□□□ -0.89
SF3B3-204ENST00000563739 IARS2Q9NSE4 1012 aaKnown RBP9.47□□□□□ -0.89
SF3B3-204ENST00000563739 C6orf203Q9P0P8 240 aaPredicted RBP9.47□□□□□ -0.89
SF3B3-204ENST00000563739 ZNF490Q9ULM2 529 aaPredicted RBP9.47□□□□□ -0.89
SF3B3-204ENST00000563739 SLC22A14Q9Y267 594 aa9.47□□□□□ -0.89
SF3B3-204ENST00000563739 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.46□□□□□ -0.9
SF3B3-204ENST00000563739 C15orf38-AP3S2A0A0A6YYH1 394 aa9.46□□□□□ -0.9
SF3B3-204ENST00000563739 A0A1W2PS29 197 aa9.46□□□□□ -0.9
SF3B3-204ENST00000563739 B4DXG7 233 aa9.46□□□□□ -0.9
SF3B3-204ENST00000563739 AP3B1O00203 1094 aa9.46□□□□□ -0.9
SF3B3-204ENST00000563739 CDC7O00311 574 aa9.46□□□□□ -0.9
SF3B3-204ENST00000563739 CTIFO43310 598 aaKnown RBP9.46□□□□□ -0.9
SF3B3-204ENST00000563739 SMPD2O60906 423 aa9.46□□□□□ -0.9
SF3B3-204ENST00000563739 BANF1O75531 89 aa9.46□□□□□ -0.9
SF3B3-204ENST00000563739 TNFSF13O75888 250 aa9.46□□□□□ -0.9
SF3B3-204ENST00000563739 SCELO95171 688 aa9.46□□□□□ -0.9
SF3B3-204ENST00000563739 AHSGP02765 367 aa9.46□□□□□ -0.9
SF3B3-204ENST00000563739 BMP7P18075 431 aa9.46□□□□□ -0.9
SF3B3-204ENST00000563739 PAMP19021 973 aa9.46□□□□□ -0.9
SF3B3-204ENST00000563739 EPORP19235 508 aa9.46□□□□□ -0.9
SF3B3-204ENST00000563739 GDF5P43026 501 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms