RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 CCZ1BP86790 482 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 CCZ1P86791 482 aaPredicted RBP2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 GUCY2DQ02846 1103 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 SGCGQ13326 291 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 TMEM187Q14656 261 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 EXOSC7Q15024 291 aaKnown RBP2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 AGKQ53H12 422 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 LIPJQ5W064 366 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 TCEAL6Q6IPX3 200 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 AMZ2Q86W34 360 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 HOGA1Q86XE5 327 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 ELMOD1Q8N336 334 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 PARP8Q8N3A8 854 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 RAB42Q8N4Z0 105 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 FAM89BQ8N5H3 189 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 CCDC185Q8N715 623 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 TMEM99Q8N816 258 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 ZNF248Q8NDW4 579 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 RPLP0P6Q8NHW5 317 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 CD99L2Q8TCZ2 262 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 GANCQ8TET4 914 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 TAF15Q92804 592 aaKnown RBP eCLIP2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 RAB39BQ96DA2 213 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 COG3Q96JB2 828 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 RPGRIP1Q96KN7 1286 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 GPR137Q96N19 417 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 KRT12Q99456 494 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 IL12RB2Q99665 862 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 SSX3Q99909 188 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 TRPV6Q9H1D0 765 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 ZDHHC6Q9H6R6 413 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 SLC35D1Q9NTN3 355 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 CACNG5Q9UF02 275 aa2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 ELF5Q9UKW6 265 aaPredicted RBP2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 DIMT1Q9UNQ2 313 aaKnown RBP2.79□□□□□ -1.96
SHCBP1-202ENST00000563219 NPC1L1Q9UHC9 1359 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 ATP6AP2A0A1C7CYW4 349 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 SLC1A7O00341 560 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 LANCL1O43813 399 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 NOL3O60936 208 aaKnown RBP2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 ZNF821O75541 412 aaPredicted RBP2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 CLDN1O95832 211 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 RPLP0P05388 317 aaKnown RBP2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 KRT13P13646 458 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 AADACP22760 399 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 MAGEA4P43358 317 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 ACADSBP45954 432 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 IFNAR2P48551 515 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 PAX9P55771 341 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 RAG2P55895 527 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 MYBPC1Q00872 1141 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 OVGP1Q12889 678 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 GRB14Q14449 540 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 MTF1Q14872 753 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 EFTUD2Q15029 972 aaKnown RBP eCLIP2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 SGSM1Q2NKQ1 1148 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 KRT71Q3SY84 523 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 ANKDD1AQ495B1 522 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 FAM106AQ4KMX7 169 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 SPANXN4Q5MJ08 99 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 ZC2HC1BQ5TFG8 222 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 CAPN13Q6MZZ7 669 aaPredicted RBP2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 SLC25A24Q6NUK1 477 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 CDC42EP5Q6NZY7 148 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 AFTPHQ6ULP2 937 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 ZNF730Q6ZMV8 503 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 SYVN1Q86TM6 617 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 OR52B4Q8NGK2 314 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 OR6M1Q8NGM8 313 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 OR6S1Q8NH40 331 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 MRPL24Q96A35 216 aaKnown RBP2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 TMEM45BQ96B21 275 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 OMA1Q96E52 524 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 VPS39Q96JC1 886 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 ART5Q96L15 291 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 FAM218AQ96MZ4 157 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 MYCBPQ99417 103 aaPredicted RBP2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 OPRPNQ99935 248 aaPredicted RBP2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 CLEC7AQ9BXN2 247 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 DGCR6LQ9BY27 220 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 NACA2Q9H009 215 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 SLC26A1Q9H2B4 701 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 GANQ9H2C0 597 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 S100A14Q9HCY8 104 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 UBE2TQ9NPD8 197 aaPredicted RBP2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 HPS4Q9NQG7 708 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 GDF3Q9NR23 364 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 POLE3Q9NRF9 147 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 ZDHHC18Q9NUE0 388 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 ACOXLQ9NUZ1 547 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 MED17Q9NVC6 651 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 TECRQ9NZ01 308 aaKnown RBP2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 TMOD2Q9NZR1 351 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 KLHL8Q9P2G9 620 aaPredicted RBP2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 ERVK-18Q9QC07 812 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 BAIAP2L1Q9UHR4 511 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 TEKT2Q9UIF3 430 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 ATP6V0A2Q9Y487 856 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 MMP24Q9Y5R2 645 aa2.78□□□□□ -1.96
SHCBP1-202ENST00000563219 SELENOKQ9Y6D0 94 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms