RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 R3HCC1LQ7Z5L2 792 aaKnown RBP17.66■□□□□ 0.42
RAB40C-207ENST00000563109 ANKRD37Q7Z713 158 aa17.66■□□□□ 0.42
RAB40C-207ENST00000563109 TMEM151BQ8IW70 566 aa17.66■□□□□ 0.42
RAB40C-207ENST00000563109 MMP21Q8N119 569 aa17.66■□□□□ 0.42
RAB40C-207ENST00000563109 OR4K14Q8NGD5 310 aa17.66■□□□□ 0.42
RAB40C-207ENST00000563109 DNAJB14Q8TBM8 379 aa17.66■□□□□ 0.42
RAB40C-207ENST00000563109 THAP4Q8WY91 577 aa17.66■□□□□ 0.42
RAB40C-207ENST00000563109 RILPQ96NA2 401 aa17.66■□□□□ 0.42
RAB40C-207ENST00000563109 EBF4Q9BQW3 602 aa17.66■□□□□ 0.42
RAB40C-207ENST00000563109 PELOQ9BRX2 385 aaKnown RBP17.66■□□□□ 0.42
RAB40C-207ENST00000563109 HEY2Q9UBP5 337 aa17.66■□□□□ 0.42
RAB40C-207ENST00000563109 BAIAP2L1Q9UHR4 511 aa17.66■□□□□ 0.42
RAB40C-207ENST00000563109 UTS2RQ9UKP6 389 aa17.66■□□□□ 0.42
RAB40C-207ENST00000563109 ZMIZ1Q9ULJ6 1067 aa17.66■□□□□ 0.42
RAB40C-207ENST00000563109 ENTPD4Q9Y227 616 aa17.66■□□□□ 0.42
RAB40C-207ENST00000563109 HS3ST3B1Q9Y662 390 aa17.66■□□□□ 0.42
RAB40C-207ENST00000563109 ZNF780BQ9Y6R6 833 aa17.66■□□□□ 0.42
RAB40C-207ENST00000563109 APC2O95996 2303 aa17.66■□□□□ 0.42
RAB40C-207ENST00000563109 TCRBV16S1A1N1A0A5B0 115 aa17.65■□□□□ 0.42
RAB40C-207ENST00000563109 UBDO15205 165 aa17.65■□□□□ 0.42
RAB40C-207ENST00000563109 NKX2-8O15522 239 aa17.65■□□□□ 0.42
RAB40C-207ENST00000563109 AKAP10O43572 662 aa17.65■□□□□ 0.42
RAB40C-207ENST00000563109 ERAL1O75616 437 aaKnown RBP17.65■□□□□ 0.42
RAB40C-207ENST00000563109 LRATO95237 230 aa17.65■□□□□ 0.42
RAB40C-207ENST00000563109 IFNA16P05015 189 aa17.65■□□□□ 0.42
RAB40C-207ENST00000563109 COX7A2P14406 83 aa17.65■□□□□ 0.42
RAB40C-207ENST00000563109 IDO1P14902 403 aa17.65■□□□□ 0.42
RAB40C-207ENST00000563109 ITPKBP27987 946 aa17.65■□□□□ 0.42
RAB40C-207ENST00000563109 EFNA3P52797 238 aa17.65■□□□□ 0.42
RAB40C-207ENST00000563109 DIO3P55073 304 aa17.65■□□□□ 0.42
RAB40C-207ENST00000563109 PLIN5Q00G26 463 aa17.65■□□□□ 0.42
RAB40C-207ENST00000563109 ID2Q02363 134 aa17.65■□□□□ 0.42
RAB40C-207ENST00000563109 EEF1A2Q05639 463 aaKnown RBP17.65■□□□□ 0.42
RAB40C-207ENST00000563109 PTGR1Q14914 329 aa17.65■□□□□ 0.42
RAB40C-207ENST00000563109 RPS6KA2Q15349 733 aa17.65■□□□□ 0.42
RAB40C-207ENST00000563109 GSTA3Q16772 222 aa17.65■□□□□ 0.42
RAB40C-207ENST00000563109 RIPOR1Q6ZS17 1223 aa17.65■□□□□ 0.42
RAB40C-207ENST00000563109 CPEB2Q7Z5Q1 589 aaKnown RBP17.65■□□□□ 0.42
RAB40C-207ENST00000563109 TICAM1Q8IUC6 712 aa17.65■□□□□ 0.42
RAB40C-207ENST00000563109 SAMD14Q8IZD0 417 aaPredicted RBP17.65■□□□□ 0.42
RAB40C-207ENST00000563109 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.65■□□□□ 0.42
RAB40C-207ENST00000563109 ADAMTS17Q8TE56 1095 aa17.65■□□□□ 0.42
RAB40C-207ENST00000563109 GFM2Q969S9 779 aaKnown RBP17.65■□□□□ 0.42
RAB40C-207ENST00000563109 EXOSC8Q96B26 276 aaKnown RBP17.65■□□□□ 0.42
RAB40C-207ENST00000563109 ANKRD9Q96BM1 317 aaPredicted RBP17.65■□□□□ 0.42
RAB40C-207ENST00000563109 C8orf44Q96CB5 159 aa17.65■□□□□ 0.42
RAB40C-207ENST00000563109 EGLN2Q96KS0 407 aa17.65■□□□□ 0.42
RAB40C-207ENST00000563109 DGAT2Q96PD7 388 aa17.65■□□□□ 0.42
RAB40C-207ENST00000563109 TMEM120AQ9BXJ8 343 aa17.65■□□□□ 0.42
RAB40C-207ENST00000563109 ALOXE3Q9BYJ1 711 aa17.65■□□□□ 0.42
RAB40C-207ENST00000563109 REEP4Q9H6H4 257 aa17.65■□□□□ 0.42
RAB40C-207ENST00000563109 AIG1Q9NVV5 245 aa17.65■□□□□ 0.42
RAB40C-207ENST00000563109 KLHL14Q9P2G3 628 aa17.65■□□□□ 0.42
RAB40C-207ENST00000563109 POLHQ9Y253 713 aa17.65■□□□□ 0.42
RAB40C-207ENST00000563109 ACACAQ13085 2346 aa17.64■□□□□ 0.41
RAB40C-207ENST00000563109 LOC102723996A0A087X1L8 192 aa17.64■□□□□ 0.41
RAB40C-207ENST00000563109 GMNCA6NCL1 334 aa17.64■□□□□ 0.41
RAB40C-207ENST00000563109 E9PBE3 544 aa17.64■□□□□ 0.41
RAB40C-207ENST00000563109 SOCS6O14544 535 aa17.64■□□□□ 0.41
RAB40C-207ENST00000563109 OR10H2O60403 315 aa17.64■□□□□ 0.41
RAB40C-207ENST00000563109 KLHL41O60662 606 aa17.64■□□□□ 0.41
RAB40C-207ENST00000563109 FURINP09958 794 aa17.64■□□□□ 0.41
RAB40C-207ENST00000563109 ALDOCP09972 364 aaKnown RBP17.64■□□□□ 0.41
RAB40C-207ENST00000563109 PRPS1L1P21108 318 aa17.64■□□□□ 0.41
RAB40C-207ENST00000563109 ARFIP2P53365 341 aa17.64■□□□□ 0.41
RAB40C-207ENST00000563109 STX1BP61266 288 aa17.64■□□□□ 0.41
RAB40C-207ENST00000563109 VAC14Q08AM6 782 aa17.64■□□□□ 0.41
RAB40C-207ENST00000563109 ATP1A4Q13733 1029 aa17.64■□□□□ 0.41
RAB40C-207ENST00000563109 SFT2D3Q587I9 215 aa17.64■□□□□ 0.41
RAB40C-207ENST00000563109 ATP1A1-AS1Q5TC04 95 aa17.64■□□□□ 0.41
RAB40C-207ENST00000563109 CGB2Q6NT52 195 aa17.64■□□□□ 0.41
RAB40C-207ENST00000563109 OR4N5Q8IXE1 308 aa17.64■□□□□ 0.41
RAB40C-207ENST00000563109 PPCDCQ96CD2 204 aa17.64■□□□□ 0.41
RAB40C-207ENST00000563109 MTERF3Q96E29 417 aa17.64■□□□□ 0.41
RAB40C-207ENST00000563109 CATSPER2Q96P56 530 aa17.64■□□□□ 0.41
RAB40C-207ENST00000563109 PRPF18Q99633 342 aaKnown RBP17.64■□□□□ 0.41
RAB40C-207ENST00000563109 DPY30Q9C005 99 aa17.64■□□□□ 0.41
RAB40C-207ENST00000563109 FAM107BQ9H098 131 aa17.64■□□□□ 0.41
RAB40C-207ENST00000563109 CPNE5Q9HCH3 593 aa17.64■□□□□ 0.41
RAB40C-207ENST00000563109 ADAP2Q9NPF8 381 aa17.64■□□□□ 0.41
RAB40C-207ENST00000563109 PNO1Q9NRX1 252 aaKnown RBP17.64■□□□□ 0.41
RAB40C-207ENST00000563109 P4HTMQ9NXG6 502 aa17.64■□□□□ 0.41
RAB40C-207ENST00000563109 C5AR2Q9P296 337 aa17.64■□□□□ 0.41
RAB40C-207ENST00000563109 TRIM33Q9UPN9 1127 aa17.64■□□□□ 0.41
RAB40C-207ENST00000563109 MAN2B2Q9Y2E5 1009 aa17.64■□□□□ 0.41
RAB40C-207ENST00000563109 NSG1A0A0A6YYJ2 146 aa17.63■□□□□ 0.41
RAB40C-207ENST00000563109 TGFBR3LH3BV60 316 aa17.63■□□□□ 0.41
RAB40C-207ENST00000563109 K7ENP7 123 aa17.63■□□□□ 0.41
RAB40C-207ENST00000563109 SCAMP2O15127 329 aaKnown RBP17.63■□□□□ 0.41
RAB40C-207ENST00000563109 DYRK3O43781 588 aa17.63■□□□□ 0.41
RAB40C-207ENST00000563109 CSNK2A2P19784 350 aaPredicted RBP17.63■□□□□ 0.41
RAB40C-207ENST00000563109 NTSP30990 170 aa17.63■□□□□ 0.41
RAB40C-207ENST00000563109 SEC24CP53992 1094 aa17.63■□□□□ 0.41
RAB40C-207ENST00000563109 CLDN8P56748 225 aa17.63■□□□□ 0.41
RAB40C-207ENST00000563109 IGLV3-21P80748 117 aaPredicted RBP17.63■□□□□ 0.41
RAB40C-207ENST00000563109 ELAVL1Q15717 326 aaKnown RBP17.63■□□□□ 0.41
RAB40C-207ENST00000563109 C6orf163Q5TEZ5 329 aa17.63■□□□□ 0.41
RAB40C-207ENST00000563109 TMEM198Q66K66 360 aa17.63■□□□□ 0.41
RAB40C-207ENST00000563109 INO80CQ6PI98 192 aaPredicted RBP17.63■□□□□ 0.41
RAB40C-207ENST00000563109 KIRREL2Q6UWL6 708 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms