RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 ARSKQ6UWY0 536 aa11.99□□□□□ -0.49
SF3B3-202ENST00000562722 CHSY3Q70JA7 882 aa11.99□□□□□ -0.49
SF3B3-202ENST00000562722 LRRC70Q7Z2Q7 622 aa11.99□□□□□ -0.49
SF3B3-202ENST00000562722 UBE3DQ7Z6J8 389 aa11.99□□□□□ -0.49
SF3B3-202ENST00000562722 ZZZ3Q8IYH5 903 aa11.99□□□□□ -0.49
SF3B3-202ENST00000562722 LIX1Q8N485 282 aa11.99□□□□□ -0.49
SF3B3-202ENST00000562722 FAM13CQ8NE31 585 aa11.99□□□□□ -0.49
SF3B3-202ENST00000562722 C7orf57Q8NEG2 295 aa11.99□□□□□ -0.49
SF3B3-202ENST00000562722 ZNF721Q8TF20 911 aa11.99□□□□□ -0.49
SF3B3-202ENST00000562722 PYROXD1Q8WU10 500 aa11.99□□□□□ -0.49
SF3B3-202ENST00000562722 ANKRD9Q96BM1 317 aaPredicted RBP11.99□□□□□ -0.49
SF3B3-202ENST00000562722 PPWD1Q96BP3 646 aaKnown RBP11.99□□□□□ -0.49
SF3B3-202ENST00000562722 WDR34Q96EX3 536 aa11.99□□□□□ -0.49
SF3B3-202ENST00000562722 RBM18Q96H35 190 aaKnown RBP11.99□□□□□ -0.49
SF3B3-202ENST00000562722 SENP5Q96HI0 755 aaPredicted RBP11.99□□□□□ -0.49
SF3B3-202ENST00000562722 ART5Q96L15 291 aa11.99□□□□□ -0.49
SF3B3-202ENST00000562722 GAL3ST4Q96RP7 486 aa11.99□□□□□ -0.49
SF3B3-202ENST00000562722 CENPKQ9BS16 269 aa11.99□□□□□ -0.49
SF3B3-202ENST00000562722 MS4A8Q9BY19 250 aa11.99□□□□□ -0.49
SF3B3-202ENST00000562722 POLDIP3Q9BY77 421 aaKnown RBP11.99□□□□□ -0.49
SF3B3-202ENST00000562722 SMYD2Q9NRG4 433 aa11.99□□□□□ -0.49
SF3B3-202ENST00000562722 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.99□□□□□ -0.49
SF3B3-202ENST00000562722 SNX24Q9Y343 169 aa11.99□□□□□ -0.49
SF3B3-202ENST00000562722 ZFHX3Q15911 3703 aa11.99□□□□□ -0.49
SF3B3-202ENST00000562722 IQANK1A0A1B0GTG1 560 aa11.98□□□□□ -0.49
SF3B3-202ENST00000562722 SUPT3HB4E1H0 165 aa11.98□□□□□ -0.49
SF3B3-202ENST00000562722 E7ESA3 106 aa11.98□□□□□ -0.49
SF3B3-202ENST00000562722 OR10H2O60403 315 aa11.98□□□□□ -0.49
SF3B3-202ENST00000562722 SUPT3HO75486 399 aa11.98□□□□□ -0.49
SF3B3-202ENST00000562722 CD99P14209 185 aa11.98□□□□□ -0.49
SF3B3-202ENST00000562722 GABRA1P14867 456 aa11.98□□□□□ -0.49
SF3B3-202ENST00000562722 SSTR1P30872 391 aa11.98□□□□□ -0.49
SF3B3-202ENST00000562722 UQCRC1P31930 480 aa11.98□□□□□ -0.49
SF3B3-202ENST00000562722 ADH7P40394 386 aa11.98□□□□□ -0.49
SF3B3-202ENST00000562722 IST1P53990 364 aa11.98□□□□□ -0.49
SF3B3-202ENST00000562722 FOLH1Q04609 750 aa11.98□□□□□ -0.49
SF3B3-202ENST00000562722 SLAMF1Q13291 335 aa11.98□□□□□ -0.49
SF3B3-202ENST00000562722 SNTB1Q13884 538 aaKnown RBP11.98□□□□□ -0.49
SF3B3-202ENST00000562722 TBCCQ15814 346 aa11.98□□□□□ -0.49
SF3B3-202ENST00000562722 HYAL4Q2M3T9 481 aa11.98□□□□□ -0.49
SF3B3-202ENST00000562722 PIGGQ5H8A4 983 aa11.98□□□□□ -0.49
SF3B3-202ENST00000562722 RAPH1Q70E73 1250 aa11.98□□□□□ -0.49
SF3B3-202ENST00000562722 SLC29A4Q7RTT9 530 aa11.98□□□□□ -0.49
SF3B3-202ENST00000562722 MYLK4Q86YV6 388 aaPredicted RBP11.98□□□□□ -0.49
SF3B3-202ENST00000562722 LIX1LQ8IVB5 337 aa11.98□□□□□ -0.49
SF3B3-202ENST00000562722 C9orf40Q8IXQ3 194 aa11.98□□□□□ -0.49
SF3B3-202ENST00000562722 PDPRQ8NCN5 879 aa11.98□□□□□ -0.49
SF3B3-202ENST00000562722 CHDHQ8NE62 594 aaPredicted RBP11.98□□□□□ -0.49
SF3B3-202ENST00000562722 NUBPLQ8TB37 319 aa11.98□□□□□ -0.49
SF3B3-202ENST00000562722 DOK4Q8TEW6 326 aa11.98□□□□□ -0.49
SF3B3-202ENST00000562722 ZNF473Q8WTR7 871 aaKnown RBP11.98□□□□□ -0.49
SF3B3-202ENST00000562722 SPACA9Q96E40 222 aaPredicted RBP11.98□□□□□ -0.49
SF3B3-202ENST00000562722 CMTM7Q96FZ5 175 aa11.98□□□□□ -0.49
SF3B3-202ENST00000562722 RBBP8Q99708 897 aa11.98□□□□□ -0.49
SF3B3-202ENST00000562722 CPNE1Q99829 537 aa11.98□□□□□ -0.49
SF3B3-202ENST00000562722 MCMBPQ9BTE3 642 aa11.98□□□□□ -0.49
SF3B3-202ENST00000562722 SORBS1Q9BX66 1292 aaKnown RBP11.98□□□□□ -0.49
SF3B3-202ENST00000562722 CD244Q9BZW8 370 aa11.98□□□□□ -0.49
SF3B3-202ENST00000562722 ALG9Q9H6U8 611 aa11.98□□□□□ -0.49
SF3B3-202ENST00000562722 RPF2Q9H7B2 306 aaKnown RBP11.98□□□□□ -0.49
SF3B3-202ENST00000562722 ZFP64Q9NPA5 681 aa11.98□□□□□ -0.49
SF3B3-202ENST00000562722 SAYSD1Q9NPB0 183 aa11.98□□□□□ -0.49
SF3B3-202ENST00000562722 SPRR3Q9UBC9 169 aa11.98□□□□□ -0.49
SF3B3-202ENST00000562722 OPTCQ9UBM4 332 aa11.98□□□□□ -0.49
SF3B3-202ENST00000562722 B4GALT7Q9UBV7 327 aa11.98□□□□□ -0.49
SF3B3-202ENST00000562722 PTBP2Q9UKA9 531 aaKnown RBP11.98□□□□□ -0.49
SF3B3-202ENST00000562722 L3MBTL1Q9Y468 752 aa11.98□□□□□ -0.49
SF3B3-202ENST00000562722 MED13LQ71F56 2210 aa11.98□□□□□ -0.49
SF3B3-202ENST00000562722 HCFC1P51610 2035 aa11.98□□□□□ -0.49
SF3B3-202ENST00000562722 INTS1Q8N201 2190 aaKnown RBP11.97□□□□□ -0.49
SF3B3-202ENST00000562722 CXorf49A8MYA2 514 aaPredicted RBP11.97□□□□□ -0.49
SF3B3-202ENST00000562722 LRATO95237 230 aa11.97□□□□□ -0.49
SF3B3-202ENST00000562722 WISP3O95389 354 aaPredicted RBP11.97□□□□□ -0.49
SF3B3-202ENST00000562722 SERPINB3P29508 390 aa11.97□□□□□ -0.49
SF3B3-202ENST00000562722 SERPINB1P30740 379 aa11.97□□□□□ -0.49
SF3B3-202ENST00000562722 TLX1P31314 330 aaPredicted RBP11.97□□□□□ -0.49
SF3B3-202ENST00000562722 PAFAH1B1P43034 410 aa11.97□□□□□ -0.49
SF3B3-202ENST00000562722 KIR2DL3P43628 341 aa11.97□□□□□ -0.49
SF3B3-202ENST00000562722 RPL21P46778 160 aaKnown RBP11.97□□□□□ -0.49
SF3B3-202ENST00000562722 TRPC1P48995 793 aa11.97□□□□□ -0.49
SF3B3-202ENST00000562722 DLX5P56178 289 aa11.97□□□□□ -0.49
SF3B3-202ENST00000562722 RAB10P61026 200 aa11.97□□□□□ -0.49
SF3B3-202ENST00000562722 PPP2R2AP63151 447 aa11.97□□□□□ -0.49
SF3B3-202ENST00000562722 TBL3Q12788 808 aaKnown RBP11.97□□□□□ -0.49
SF3B3-202ENST00000562722 CALCOCO2Q13137 446 aa11.97□□□□□ -0.49
SF3B3-202ENST00000562722 SLMAPQ14BN4 828 aa11.97□□□□□ -0.49
SF3B3-202ENST00000562722 ZNF791Q3KP31 576 aaPredicted RBP11.97□□□□□ -0.49
SF3B3-202ENST00000562722 KHDRBS2Q5VWX1 349 aaKnown RBP11.97□□□□□ -0.49
SF3B3-202ENST00000562722 OR4C11Q6IEV9 310 aa11.97□□□□□ -0.49
SF3B3-202ENST00000562722 CTAGE3PQ8IX95 158 aa11.97□□□□□ -0.49
SF3B3-202ENST00000562722 FBXW8Q8N3Y1 598 aa11.97□□□□□ -0.49
SF3B3-202ENST00000562722 BBOF1Q8ND07 529 aa11.97□□□□□ -0.49
SF3B3-202ENST00000562722 STAG3L4Q8TBR4 150 aa11.97□□□□□ -0.49
SF3B3-202ENST00000562722 RGMAQ96B86 450 aa11.97□□□□□ -0.49
SF3B3-202ENST00000562722 LRRC46Q96FV0 321 aa11.97□□□□□ -0.49
SF3B3-202ENST00000562722 GPR22Q99680 433 aa11.97□□□□□ -0.49
SF3B3-202ENST00000562722 SLC6A15Q9H2J7 730 aa11.97□□□□□ -0.49
SF3B3-202ENST00000562722 OR51B5Q9H339 312 aa11.97□□□□□ -0.49
SF3B3-202ENST00000562722 ZNF703Q9H7S9 590 aaPredicted RBP11.97□□□□□ -0.49
SF3B3-202ENST00000562722 CCM2LQ9NUG4 571 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms