RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 MTIF3Q9H2K0 278 aaKnown RBP2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 SP140LQ9H930 580 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 UBE2TQ9NPD8 197 aaPredicted RBP2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 MRGBPQ9NV56 204 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 GPR83Q9NYM4 423 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 UBQLN2Q9UHD9 624 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 STYXL1Q9Y6J8 313 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 TNS1Q9HBL0 1735 aaKnown RBP2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 FMN2Q9NZ56 1722 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 IFT172Q9UG01 1749 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 KANK1Q14678 1352 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 ANKRD30AQ9BXX3 1397 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 SBF2Q86WG5 1849 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 ADGRL2O95490 1459 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 C1orf167Q5SNV9 1468 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 RGPD5Q99666 1765 aa2.44□□□□□ -2.02
HDGFL3-202ENST00000562702 PFASO15067 1338 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 ATRNO75882 1429 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 ADGRL3Q9HAR2 1447 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 ANKRD50Q9ULJ7 1429 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 USP32Q8NFA0 1604 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 NRAPQ86VF7 1730 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 CRYBG1Q9Y4K1 1723 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 ZNF732B4DXR9 585 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 SLC30A4O14863 429 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 SH3BGRLO75368 114 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 CLN5O75503 358 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 FGF19O95750 216 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 OR3A1P47881 315 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 EVCP57679 992 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 ACY1Q03154 408 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 PTK6Q13882 451 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 ECSCRQ19T08 205 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 MUC21Q5SSG8 566 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 PLPP4Q5VZY2 271 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 SEL1L3Q68CR1 1132 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 DCLRE1AQ6PJP8 1040 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 MSANTD1Q6ZTZ1 278 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 HPS6Q86YV9 775 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 SLC43A2Q8N370 569 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 FGFRL1Q8N441 504 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 SUMF1Q8NBK3 374 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 RNF149Q8NC42 400 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 CSNK1G2-AS1Q8NCQ2 148 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 OR13C5Q8NGS8 318 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 OR6F1Q8NGZ6 308 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 AFAP1L1Q8TED9 768 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 SSC4DQ8WTU2 575 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 CKAP2Q8WWK9 683 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 CORO2AQ92828 525 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 SGF29Q96ES7 293 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 TAAR6Q96RI8 345 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 PRMT1Q99873 361 aaKnown RBP2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 CITED2Q99967 270 aaPredicted RBP2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 VIPAS39Q9H9C1 493 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 WDR41Q9HAD4 459 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 NMUR1Q9HB89 426 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 GPR173Q9NS66 373 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 SLCO1C1Q9NYB5 712 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 MYOM2P54296 1465 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 RPRD2Q5VT52 1461 aaKnown RBP2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 PXDNQ92626 1479 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 EP400Q96L91 3159 aa2.43□□□□□ -2.02
HDGFL3-202ENST00000562702 NCOA3Q9Y6Q9 1424 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 NUP188Q5SRE5 1749 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 TRPM3Q9HCF6 1732 aaPredicted RBP2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 CHD4Q14839 1912 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 RALGAPBQ86X10 1494 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 PLEKHH1Q9ULM0 1364 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 CCER2I3L3R5 266 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 K7EQG2 157 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 CTDSPLO15194 276 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 ACSL4O60488 711 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 GP9P14770 177 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 COPB2P35606 906 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 KHKP50053 298 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 BACE1P56817 501 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 RBP5P82980 135 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 BFSP1Q12934 665 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 CEACAM7Q14002 265 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 C3AR1Q16581 482 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 EIPR1Q53HC9 387 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 C9orf66Q5T8R8 295 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 AGAP7PQ5VUJ5 663 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 CEACAM19Q7Z692 300 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 ADCK1Q86TW2 530 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 TDHQ8IZJ6 230 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 ZNF444Q8N0Y2 327 aaPredicted RBP2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 CNPY4Q8N129 248 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 SIX6OS1Q8N1H7 587 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 SMYD1Q8NB12 490 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 KIAA0895Q8NCT3 520 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 UBLCP1Q8WVY7 318 aaPredicted RBP2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 SMPDL3AQ92484 453 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 SEPT8Q92599 483 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 BPIFA2Q96DR5 249 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 PKNOX2Q96KN3 472 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 ANKRD27Q96NW4 1050 aa2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 ALKBH3Q96Q83 286 aaPredicted RBP2.42□□□□□ -2.02
HDGFL3-202ENST00000562702 TNFRSF13CQ96RJ3 184 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms