RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 ALDH4A1P30038 563 aa16.17■□□□□ 0.18
HDDC3-206ENST00000561036 GABRA4P48169 554 aa16.17■□□□□ 0.18
HDDC3-206ENST00000561036 HSPA13P48723 471 aa16.17■□□□□ 0.18
HDDC3-206ENST00000561036 CCT3P49368 545 aaKnown RBP16.17■□□□□ 0.18
HDDC3-206ENST00000561036 NCBP2P52298 156 aaKnown RBP eCLIP16.17■□□□□ 0.18
HDDC3-206ENST00000561036 EMP3P54852 163 aa16.17■□□□□ 0.18
HDDC3-206ENST00000561036 HSPB3Q12988 150 aa16.17■□□□□ 0.18
HDDC3-206ENST00000561036 LRRC36Q1X8D7 754 aa16.17■□□□□ 0.18
HDDC3-206ENST00000561036 TCTE1Q5JU00 501 aa16.17■□□□□ 0.18
HDDC3-206ENST00000561036 COX20Q5RI15 118 aa16.17■□□□□ 0.18
HDDC3-206ENST00000561036 GARNL3Q5VVW2 1013 aa16.17■□□□□ 0.18
HDDC3-206ENST00000561036 ANGPTL8Q6UXH0 198 aa16.17■□□□□ 0.18
HDDC3-206ENST00000561036 CCDC80Q76M96 950 aa16.17■□□□□ 0.18
HDDC3-206ENST00000561036 C6orf120Q7Z4R8 191 aa16.17■□□□□ 0.18
HDDC3-206ENST00000561036 PACRGLQ8N7B6 248 aa16.17■□□□□ 0.18
HDDC3-206ENST00000561036 ICA1LQ8NDH6 482 aa16.17■□□□□ 0.18
HDDC3-206ENST00000561036 FBXO30Q8TB52 745 aa16.17■□□□□ 0.18
HDDC3-206ENST00000561036 NCSTNQ92542 709 aa16.17■□□□□ 0.18
HDDC3-206ENST00000561036 EME1Q96AY2 570 aa16.17■□□□□ 0.18
HDDC3-206ENST00000561036 CNRIP1Q96F85 164 aaPredicted RBP16.17■□□□□ 0.18
HDDC3-206ENST00000561036 SLC47A1Q96FL8 570 aa16.17■□□□□ 0.18
HDDC3-206ENST00000561036 C10orf90Q96M02 699 aa16.17■□□□□ 0.18
HDDC3-206ENST00000561036 ZNF681Q96N22 645 aa16.17■□□□□ 0.18
HDDC3-206ENST00000561036 TGM7Q96PF1 710 aa16.17■□□□□ 0.18
HDDC3-206ENST00000561036 SEPHS2Q99611 448 aa16.17■□□□□ 0.18
HDDC3-206ENST00000561036 ANKHQ9HCJ1 492 aa16.17■□□□□ 0.18
HDDC3-206ENST00000561036 PDE7BQ9NP56 450 aa16.17■□□□□ 0.18
HDDC3-206ENST00000561036 SEMA5BQ9P283 1151 aa16.17■□□□□ 0.18
HDDC3-206ENST00000561036 ACSL6Q9UKU0 697 aa16.17■□□□□ 0.18
HDDC3-206ENST00000561036 PADI4Q9UM07 663 aa16.17■□□□□ 0.18
HDDC3-206ENST00000561036 TECTAO75443 2155 aa16.16■□□□□ 0.18
HDDC3-206ENST00000561036 GLOD5A6NK44 160 aa16.16■□□□□ 0.18
HDDC3-206ENST00000561036 DEAF1O75398 565 aaPredicted RBP16.16■□□□□ 0.18
HDDC3-206ENST00000561036 ERAL1O75616 437 aaKnown RBP16.16■□□□□ 0.18
HDDC3-206ENST00000561036 ARAFP10398 606 aa16.16■□□□□ 0.18
HDDC3-206ENST00000561036 GPC1P35052 558 aa16.16■□□□□ 0.18
HDDC3-206ENST00000561036 MLLT3P42568 568 aaPredicted RBP16.16■□□□□ 0.18
HDDC3-206ENST00000561036 PPM1FP49593 454 aaPredicted RBP16.16■□□□□ 0.18
HDDC3-206ENST00000561036 CDK9P50750 372 aaKnown RBP16.16■□□□□ 0.18
HDDC3-206ENST00000561036 CCT8P50990 548 aa16.16■□□□□ 0.18
HDDC3-206ENST00000561036 ANXA11P50995 505 aaKnown RBP16.16■□□□□ 0.18
HDDC3-206ENST00000561036 OR1D5P58170 312 aa16.16■□□□□ 0.18
HDDC3-206ENST00000561036 DSTNP60981 165 aa16.16■□□□□ 0.18
HDDC3-206ENST00000561036 EEF1A2Q05639 463 aaKnown RBP16.16■□□□□ 0.18
HDDC3-206ENST00000561036 SQSTM1Q13501 440 aa16.16■□□□□ 0.18
HDDC3-206ENST00000561036 HLA-BQ31612 363 aa16.16■□□□□ 0.18
HDDC3-206ENST00000561036 SFT2D3Q587I9 215 aa16.16■□□□□ 0.18
HDDC3-206ENST00000561036 WDR74Q6RFH5 385 aaPredicted RBP16.16■□□□□ 0.18
HDDC3-206ENST00000561036 ENPP6Q6UWR7 440 aa16.16■□□□□ 0.18
HDDC3-206ENST00000561036 CBLL1Q75N03 491 aa16.16■□□□□ 0.18
HDDC3-206ENST00000561036 EIF3MQ7L2H7 374 aaKnown RBP16.16■□□□□ 0.18
HDDC3-206ENST00000561036 DGLUCYQ7Z3D6 616 aa16.16■□□□□ 0.18
HDDC3-206ENST00000561036 AMIGO2Q86SJ2 522 aa16.16■□□□□ 0.18
HDDC3-206ENST00000561036 OR4K14Q8NGD5 310 aa16.16■□□□□ 0.18
HDDC3-206ENST00000561036 OR4C6Q8NH72 309 aa16.16■□□□□ 0.18
HDDC3-206ENST00000561036 OR5AK3PQ8NH89 298 aa16.16■□□□□ 0.18
HDDC3-206ENST00000561036 SAP25Q8TEE9 199 aa16.16■□□□□ 0.18
HDDC3-206ENST00000561036 NAF1Q96HR8 494 aaKnown RBP16.16■□□□□ 0.18
HDDC3-206ENST00000561036 BDH2Q9BUT1 245 aa16.16■□□□□ 0.18
HDDC3-206ENST00000561036 C9orf16Q9BUW7 83 aa16.16■□□□□ 0.18
HDDC3-206ENST00000561036 ASPSCR1Q9BZE9 553 aa16.16■□□□□ 0.18
HDDC3-206ENST00000561036 A4GALTQ9NPC4 353 aa16.16■□□□□ 0.18
HDDC3-206ENST00000561036 RAPGEFL1Q9UHV5 662 aa16.16■□□□□ 0.18
HDDC3-206ENST00000561036 LRCH1Q9Y2L9 728 aa16.16■□□□□ 0.18
HDDC3-206ENST00000561036 MRPS2Q9Y399 296 aaKnown RBP16.16■□□□□ 0.18
HDDC3-206ENST00000561036 NAALAD2Q9Y3Q0 740 aa16.16■□□□□ 0.18
HDDC3-206ENST00000561036 ZNF451Q9Y4E5 1061 aa16.16■□□□□ 0.18
HDDC3-206ENST00000561036 MAP4K5Q9Y4K4 846 aa16.16■□□□□ 0.18
HDDC3-206ENST00000561036 MN1Q10571 1320 aaPredicted RBP16.16■□□□□ 0.18
HDDC3-206ENST00000561036 CLOCKO15516 846 aa16.15■□□□□ 0.18
HDDC3-206ENST00000561036 B4GAT1O43505 415 aa16.15■□□□□ 0.18
HDDC3-206ENST00000561036 HCRTR1O43613 425 aa16.15■□□□□ 0.18
HDDC3-206ENST00000561036 PRKRAO75569 313 aaKnown RBP16.15■□□□□ 0.18
HDDC3-206ENST00000561036 TRIOO75962 3097 aa16.15■□□□□ 0.18
HDDC3-206ENST00000561036 IFI6P09912 130 aa16.15■□□□□ 0.18
HDDC3-206ENST00000561036 NUDT7P0C024 238 aa16.15■□□□□ 0.18
HDDC3-206ENST00000561036 GFERP55789 205 aa16.15■□□□□ 0.18
HDDC3-206ENST00000561036 SCARB2Q14108 478 aa16.15■□□□□ 0.18
HDDC3-206ENST00000561036 FAM53BQ14153 422 aa16.15■□□□□ 0.18
HDDC3-206ENST00000561036 NR0B2Q15466 257 aa16.15■□□□□ 0.18
HDDC3-206ENST00000561036 INAVAQ3KP66 663 aa16.15■□□□□ 0.18
HDDC3-206ENST00000561036 FAM180BQ6P0A1 224 aa16.15■□□□□ 0.18
HDDC3-206ENST00000561036 USP53Q70EK8 1073 aa16.15■□□□□ 0.18
HDDC3-206ENST00000561036 KMT5CQ86Y97 462 aa16.15■□□□□ 0.18
HDDC3-206ENST00000561036 METTL25Q8N6Q8 603 aa16.15■□□□□ 0.18
HDDC3-206ENST00000561036 FAM181AQ8N9Y4 354 aa16.15■□□□□ 0.18
HDDC3-206ENST00000561036 OR56A1Q8NGH5 318 aa16.15■□□□□ 0.18
HDDC3-206ENST00000561036 SUN3Q8TAQ9 357 aa16.15■□□□□ 0.18
HDDC3-206ENST00000561036 FAM110BQ8TC76 370 aa16.15■□□□□ 0.18
HDDC3-206ENST00000561036 ADAMTS18Q8TE60 1221 aa16.15■□□□□ 0.18
HDDC3-206ENST00000561036 TANKQ92844 425 aa16.15■□□□□ 0.18
HDDC3-206ENST00000561036 SEMA6AQ9H2E6 1030 aa16.15■□□□□ 0.18
HDDC3-206ENST00000561036 CAPN10Q9HC96 672 aa16.15■□□□□ 0.18
HDDC3-206ENST00000561036 ANGPT4Q9Y264 503 aa16.15■□□□□ 0.18
HDDC3-206ENST00000561036 IGHV5-51A0A0C4DH38 117 aa16.14■□□□□ 0.17
HDDC3-206ENST00000561036 BLACEA4D250 179 aa16.14■□□□□ 0.17
HDDC3-206ENST00000561036 FITM1A5D6W6 292 aa16.14■□□□□ 0.17
HDDC3-206ENST00000561036 KIF1CO43896 1103 aaKnown RBP16.14■□□□□ 0.17
HDDC3-206ENST00000561036 TPST1O60507 370 aa16.14■□□□□ 0.17
HDDC3-206ENST00000561036 PRSS23O95084 383 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms