RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 OR2L5Q8NG80 312 aa9.67□□□□□ -0.86
CDC42BPB-207ENST00000560492 LINC01560Q8TB33 94 aa9.67□□□□□ -0.86
CDC42BPB-207ENST00000560492 PTPMT1Q8WUK0 201 aaPredicted RBP9.67□□□□□ -0.86
CDC42BPB-207ENST00000560492 KIAA1191Q96A73 305 aa9.67□□□□□ -0.86
CDC42BPB-207ENST00000560492 HSPBAP1Q96EW2 488 aa9.67□□□□□ -0.86
CDC42BPB-207ENST00000560492 SIGLEC10Q96LC7 697 aa9.67□□□□□ -0.86
CDC42BPB-207ENST00000560492 DGAT2Q96PD7 388 aa9.67□□□□□ -0.86
CDC42BPB-207ENST00000560492 GAL3ST4Q96RP7 486 aa9.67□□□□□ -0.86
CDC42BPB-207ENST00000560492 ZNF703Q9H7S9 590 aaPredicted RBP9.67□□□□□ -0.86
CDC42BPB-207ENST00000560492 FOXD3Q9UJU5 478 aaPredicted RBP9.67□□□□□ -0.86
CDC42BPB-207ENST00000560492 DAPP1Q9UN19 280 aa9.67□□□□□ -0.86
CDC42BPB-207ENST00000560492 VWA7Q9Y334 891 aa9.67□□□□□ -0.86
CDC42BPB-207ENST00000560492 KIAA1549Q9HCM3 1950 aa9.66□□□□□ -0.86
CDC42BPB-207ENST00000560492 CLCA1A8K7I4 914 aa9.66□□□□□ -0.86
CDC42BPB-207ENST00000560492 CDC7O00311 574 aa9.66□□□□□ -0.86
CDC42BPB-207ENST00000560492 SH3BGRLO75368 114 aa9.66□□□□□ -0.86
CDC42BPB-207ENST00000560492 TTC4O95801 387 aa9.66□□□□□ -0.86
CDC42BPB-207ENST00000560492 RFPL3SP0C7P2 107 aa9.66□□□□□ -0.86
CDC42BPB-207ENST00000560492 EPXP11678 715 aa9.66□□□□□ -0.86
CDC42BPB-207ENST00000560492 GABRB3P28472 473 aa9.66□□□□□ -0.86
CDC42BPB-207ENST00000560492 PCSK6P29122 969 aa9.66□□□□□ -0.86
CDC42BPB-207ENST00000560492 GDF5P43026 501 aa9.66□□□□□ -0.86
CDC42BPB-207ENST00000560492 CPA2P48052 419 aa9.66□□□□□ -0.86
CDC42BPB-207ENST00000560492 AGFG1P52594 562 aaKnown RBP9.66□□□□□ -0.86
CDC42BPB-207ENST00000560492 NKX6-1P78426 367 aaPredicted RBP9.66□□□□□ -0.86
CDC42BPB-207ENST00000560492 PPP1R7Q15435 360 aa9.66□□□□□ -0.86
CDC42BPB-207ENST00000560492 C18orf21Q32NC0 220 aaPredicted RBP9.66□□□□□ -0.86
CDC42BPB-207ENST00000560492 HP1BP3Q5SSJ5 553 aaPredicted RBP9.66□□□□□ -0.86
CDC42BPB-207ENST00000560492 CCDC137Q6PK04 289 aaKnown RBP9.66□□□□□ -0.86
CDC42BPB-207ENST00000560492 SBSNQ6UWP8 590 aa9.66□□□□□ -0.86
CDC42BPB-207ENST00000560492 P3H2Q8IVL5 708 aa9.66□□□□□ -0.86
CDC42BPB-207ENST00000560492 SNX31Q8N9S9 440 aa9.66□□□□□ -0.86
CDC42BPB-207ENST00000560492 NAXEQ8NCW5 288 aa9.66□□□□□ -0.86
CDC42BPB-207ENST00000560492 NEIL3Q8TAT5 605 aa9.66□□□□□ -0.86
CDC42BPB-207ENST00000560492 CERS2Q96G23 380 aa9.66□□□□□ -0.86
CDC42BPB-207ENST00000560492 ZNF597Q96LX8 424 aa9.66□□□□□ -0.86
CDC42BPB-207ENST00000560492 QRFPRQ96P65 431 aa9.66□□□□□ -0.86
CDC42BPB-207ENST00000560492 TRIB1Q96RU8 372 aa9.66□□□□□ -0.86
CDC42BPB-207ENST00000560492 KRT12Q99456 494 aa9.66□□□□□ -0.86
CDC42BPB-207ENST00000560492 SH3GL2Q99962 352 aa9.66□□□□□ -0.86
CDC42BPB-207ENST00000560492 DOHHQ9BU89 302 aa9.66□□□□□ -0.86
CDC42BPB-207ENST00000560492 REPIN1Q9BWE0 567 aaKnown RBP9.66□□□□□ -0.86
CDC42BPB-207ENST00000560492 EPB41L4BQ9H329 900 aa9.66□□□□□ -0.86
CDC42BPB-207ENST00000560492 ZFP64Q9NPA5 681 aa9.66□□□□□ -0.86
CDC42BPB-207ENST00000560492 WWOXQ9NZC7 414 aa9.66□□□□□ -0.86
CDC42BPB-207ENST00000560492 CTNNAL1Q9UBT7 734 aa9.66□□□□□ -0.86
CDC42BPB-207ENST00000560492 VTI1BQ9UEU0 232 aa9.66□□□□□ -0.86
CDC42BPB-207ENST00000560492 ASIC3Q9UHC3 531 aa9.66□□□□□ -0.86
CDC42BPB-207ENST00000560492 IKZF3Q9UKT9 509 aa9.66□□□□□ -0.86
CDC42BPB-207ENST00000560492 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.66□□□□□ -0.86
CDC42BPB-207ENST00000560492 DOCK7Q96N67 2140 aa9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 FAM171A2A8MVW0 826 aa9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 CYR61O00622 381 aa9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 CES2O00748 559 aa9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 SMAD7O15105 426 aaKnown RBP9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 ARHGEF9O43307 516 aa9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 ZNF354AO60765 605 aaPredicted RBP9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 CLEC3AO75596 197 aa9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 ETHE1O95571 254 aa9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 CPN2P22792 545 aa9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 GSTM2P28161 218 aa9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 SSR2P43308 183 aa9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 MAGEA3P43357 314 aa9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 RPL21P46778 160 aaKnown RBP9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 KCNC1P48547 511 aa9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 MASP1P48740 699 aa9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 HNMTP50135 292 aa9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 TBL3Q12788 808 aaKnown RBP9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 DUSP8Q13202 625 aa9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 ZNF460Q14592 562 aa9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 SF3B4Q15427 424 aaKnown RBP eCLIP9.65□□□□□ -0.862e-8■■■□□ 15.1
CDC42BPB-207ENST00000560492 HYAL4Q2M3T9 481 aa9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 ACSF3Q4G176 576 aaPredicted RBP9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 ABHD17CQ6PCB6 329 aa9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 SLCO4C1Q6ZQN7 724 aa9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 SLC29A4Q7RTT9 530 aa9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 LACC1Q8IV20 430 aa9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 LRRC8AQ8IWT6 810 aa9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 OR4N5Q8IXE1 308 aa9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 NKAPQ8N5F7 415 aaKnown RBP9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 NAT8LQ8N9F0 302 aa9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 TRIM58Q8NG06 486 aa9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 OR8K3Q8NH51 312 aa9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 DOK4Q8TEW6 326 aa9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 GRK7Q8WTQ7 553 aa9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 DIO2Q92813 273 aa9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 SPACA9Q96E40 222 aaPredicted RBP9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 ART5Q96L15 291 aa9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 KCNC2Q96PR1 638 aa9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 F2RL3Q96RI0 385 aa9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 MAPKAP1Q9BPZ7 522 aa9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 ROGDIQ9GZN7 287 aa9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 CORO1CQ9ULV4 474 aaPredicted RBP9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 OARD1Q9Y530 152 aa9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 CLDN16Q9Y5I7 305 aa9.65□□□□□ -0.86
CDC42BPB-207ENST00000560492 IQANK1A0A1B0GTG1 560 aa9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 AHRRA9YTQ3 701 aa9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 KDM4EB2RXH2 506 aaPredicted RBP9.64□□□□□ -0.87
CDC42BPB-207ENST00000560492 RTCAO00442 366 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms