RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 NR2F6P10588 404 aa13.12□□□□□ -0.31
PKNOX1-209ENST00000560448 TPP2P29144 1249 aaPredicted RBP13.12□□□□□ -0.31
PKNOX1-209ENST00000560448 FOXA1P55317 472 aa13.12□□□□□ -0.31
PKNOX1-209ENST00000560448 FOXL2P58012 376 aa13.12□□□□□ -0.31
PKNOX1-209ENST00000560448 NCALDP61601 193 aa13.12□□□□□ -0.31
PKNOX1-209ENST00000560448 IGLV3-21P80748 117 aaPredicted RBP13.12□□□□□ -0.31
PKNOX1-209ENST00000560448 STX4Q12846 297 aa13.12□□□□□ -0.31
PKNOX1-209ENST00000560448 COL9A2Q14055 689 aaPredicted RBP13.12□□□□□ -0.31
PKNOX1-209ENST00000560448 SFT2D3Q587I9 215 aa13.12□□□□□ -0.31
PKNOX1-209ENST00000560448 FAM91A1Q658Y4 838 aa13.12□□□□□ -0.31
PKNOX1-209ENST00000560448 MAVSQ7Z434 540 aa13.12□□□□□ -0.31
PKNOX1-209ENST00000560448 MTDHQ86UE4 582 aaKnown RBP13.12□□□□□ -0.31
PKNOX1-209ENST00000560448 SAMD14Q8IZD0 417 aaPredicted RBP13.12□□□□□ -0.31
PKNOX1-209ENST00000560448 FAM47BQ8NA70 645 aa13.12□□□□□ -0.31
PKNOX1-209ENST00000560448 DAZLQ92904 295 aaKnown RBP13.12□□□□□ -0.31
PKNOX1-209ENST00000560448 ERP27Q96DN0 273 aa13.12□□□□□ -0.31
PKNOX1-209ENST00000560448 C11orf24Q96F05 449 aaPredicted RBP13.12□□□□□ -0.31
PKNOX1-209ENST00000560448 KCNA7Q96RP8 456 aa13.12□□□□□ -0.31
PKNOX1-209ENST00000560448 SMAD5Q99717 465 aaKnown RBP13.12□□□□□ -0.31
PKNOX1-209ENST00000560448 ILKAPQ9H0C8 392 aaPredicted RBP13.12□□□□□ -0.31
PKNOX1-209ENST00000560448 MMP25Q9NPA2 562 aa13.12□□□□□ -0.31
PKNOX1-209ENST00000560448 PNPOQ9NVS9 261 aa13.12□□□□□ -0.31
PKNOX1-209ENST00000560448 VTI1BQ9UEU0 232 aa13.12□□□□□ -0.31
PKNOX1-209ENST00000560448 TEKT2Q9UIF3 430 aa13.12□□□□□ -0.31
PKNOX1-209ENST00000560448 FBXW2Q9UKT8 454 aa13.12□□□□□ -0.31
PKNOX1-209ENST00000560448 PSME2Q9UL46 239 aa13.12□□□□□ -0.31
PKNOX1-209ENST00000560448 PPIEQ9UNP9 301 aaKnown RBP13.12□□□□□ -0.31
PKNOX1-209ENST00000560448 ATG4BQ9Y4P1 393 aa13.12□□□□□ -0.31
PKNOX1-209ENST00000560448 DNAJC15Q9Y5T4 150 aa13.12□□□□□ -0.31
PKNOX1-209ENST00000560448 SAGE2PA6NJ88 616 aa13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 TMPRSS11DO60235 418 aa13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 EEDO75530 441 aaKnown RBP13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 MYO1DO94832 1006 aa13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 HSPA4LO95757 839 aa13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 KLK1P06870 262 aa13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 CHRNGP07510 517 aa13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 FAM87AP0C7U9 286 aa13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 T-ENOLP0DO92 83 aa13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 KITP10721 976 aa13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 COX7A2P14406 83 aa13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 PCSK2P16519 638 aa13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 ITGA3P26006 1051 aa13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 SERPINB3P29508 390 aa13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 TIA1P31483 386 aaKnown RBP eCLIP13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 GALNSP34059 522 aa13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 HTR6P50406 440 aa13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 CCL11P51671 97 aa13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 PGDP52209 483 aa13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 AQP5P55064 265 aa13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 EEF1A2Q05639 463 aaKnown RBP13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 HEPACAMQ14CZ8 416 aa13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 ELAVL1Q15717 326 aaKnown RBP13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 TCHHL1Q5QJ38 904 aaPredicted RBP13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 SH2D4BQ5SQS7 431 aa13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 AGAP7PQ5VUJ5 663 aa13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 CPZQ66K79 652 aa13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 FAAH2Q6GMR7 532 aa13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 PAPD4Q6PIY7 484 aaKnown RBP13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 PCSK4Q6UW60 755 aa13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 CLNKQ7Z7G1 428 aa13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 TMEM132CQ8N3T6 1108 aa13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 C1orf52Q8N6N3 182 aaKnown RBP13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 SLC39A7Q92504 469 aa13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 C8orf44Q96CB5 159 aa13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 ABHD17AQ96GS6 310 aa13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 ART5Q96L15 291 aa13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 AGAP4Q96P64 663 aa13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 CSF3RQ99062 836 aa13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 ZNF160Q9HCG1 818 aa13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 MARCOQ9UEW3 520 aaPredicted RBP13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 RAP2CQ9Y3L5 183 aa13.11□□□□□ -0.31
PKNOX1-209ENST00000560448 MGAQ8IWI9 3026 aa13.1□□□□□ -0.31
PKNOX1-209ENST00000560448 EIF4E1BA6NMX2 242 aaKnown RBP13.1□□□□□ -0.31
PKNOX1-209ENST00000560448 FAM227AF5H4B4 570 aa13.1□□□□□ -0.31
PKNOX1-209ENST00000560448 PCDH7O60245 1069 aa13.1□□□□□ -0.31
PKNOX1-209ENST00000560448 PRR35P0CG20 571 aa13.1□□□□□ -0.31
PKNOX1-209ENST00000560448 DRD2P14416 443 aa13.1□□□□□ -0.31
PKNOX1-209ENST00000560448 MAOAP21397 527 aa13.1□□□□□ -0.31
PKNOX1-209ENST00000560448 EFNA3P52797 238 aa13.1□□□□□ -0.31
PKNOX1-209ENST00000560448 TAS2R50P59544 299 aa13.1□□□□□ -0.31
PKNOX1-209ENST00000560448 BTG2P78543 158 aa13.1□□□□□ -0.31
PKNOX1-209ENST00000560448 PLIN5Q00G26 463 aa13.1□□□□□ -0.31
PKNOX1-209ENST00000560448 ZNF763Q0D2J5 394 aa13.1□□□□□ -0.31
PKNOX1-209ENST00000560448 CRB2Q5IJ48 1285 aa13.1□□□□□ -0.31
PKNOX1-209ENST00000560448 NDUFAF5Q5TEU4 345 aa13.1□□□□□ -0.31
PKNOX1-209ENST00000560448 CLEC6AQ6EIG7 209 aa13.1□□□□□ -0.31
PKNOX1-209ENST00000560448 LANCL3Q6ZV70 420 aa13.1□□□□□ -0.31
PKNOX1-209ENST00000560448 IKBIPQ70UQ0 350 aa13.1□□□□□ -0.31
PKNOX1-209ENST00000560448 WDR75Q8IWA0 830 aaKnown RBP13.1□□□□□ -0.31
PKNOX1-209ENST00000560448 PARP9Q8IXQ6 854 aa13.1□□□□□ -0.31
PKNOX1-209ENST00000560448 LGI4Q8N135 537 aa13.1□□□□□ -0.31
PKNOX1-209ENST00000560448 FDCSPQ8NFU4 85 aa13.1□□□□□ -0.31
PKNOX1-209ENST00000560448 OR14A16Q8NHC5 309 aa13.1□□□□□ -0.31
PKNOX1-209ENST00000560448 TWIST2Q8WVJ9 160 aa13.1□□□□□ -0.31
PKNOX1-209ENST00000560448 TSLPQ969D9 159 aa13.1□□□□□ -0.31
PKNOX1-209ENST00000560448 PPP3R2Q96LZ3 170 aa13.1□□□□□ -0.31
PKNOX1-209ENST00000560448 HBEGFQ99075 208 aa13.1□□□□□ -0.31
PKNOX1-209ENST00000560448 WDR77Q9BQA1 342 aaPredicted RBP13.1□□□□□ -0.31
PKNOX1-209ENST00000560448 SORBS1Q9BX66 1292 aaKnown RBP13.1□□□□□ -0.31
PKNOX1-209ENST00000560448 NECTIN3Q9NQS3 549 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms