RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 OR2L5Q8NG80 312 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 OR56A1Q8NGH5 318 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 OR10Q1Q8NGQ4 319 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 RHOXF1Q8NHV9 184 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 CNIH3Q8TBE1 160 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 APOBEC4Q8WW27 367 aaKnown RBP9.21□□□□□ -0.94
RTF1-206ENST00000560447 PROX1Q92786 737 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 SLC35G5Q96KT7 338 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 NECTIN4Q96NY8 510 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 PRAP1Q96NZ9 151 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 OR2M4Q96R27 311 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 FEVQ99581 238 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 KXD1Q9BQD3 176 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 ACAT2Q9BWD1 397 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 FUNDC2Q9BWH2 189 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 RACGAP1Q9H0H5 632 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 SIRT3Q9NTG7 399 aaPredicted RBP9.21□□□□□ -0.94
RTF1-206ENST00000560447 ACER3Q9NUN7 267 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 TBC1D23Q9NUY8 699 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 FKBP14Q9NWM8 211 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 PAK1IP1Q9NWT1 392 aaPredicted RBP9.21□□□□□ -0.94
RTF1-206ENST00000560447 WARS2Q9UGM6 360 aaKnown RBP9.21□□□□□ -0.94
RTF1-206ENST00000560447 ACAD8Q9UKU7 415 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 MGAT4BQ9UQ53 548 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 B3GNT3Q9Y2A9 372 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 PRKAB1Q9Y478 270 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 PCDHGA6Q9Y5G7 932 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 A0A1W2PPW3 197 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 SH3PXD2BA1X283 911 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 ANKRD33BA6NCL7 494 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 PTGES3LE9PB15 166 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 FAAHO00519 579 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 MAN2B1O00754 1011 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 CASC3O15234 703 aaKnown RBP9.2□□□□□ -0.94
RTF1-206ENST00000560447 ASNA1O43681 348 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 WBP4O75554 376 aaKnown RBP9.2□□□□□ -0.94
RTF1-206ENST00000560447 CLPXO76031 633 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 SLITRK5O94991 958 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 MFN2O95140 757 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 GBAP04062 536 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 INHBBP09529 407 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 AQP1P29972 269 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 KRT20P35900 424 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 KCNJ5P48544 419 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 CCT3P49368 545 aaKnown RBP9.2□□□□□ -0.94
RTF1-206ENST00000560447 GP2P55259 537 aaKnown RBP9.2□□□□□ -0.94
RTF1-206ENST00000560447 CDH12P55289 794 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 CDC42P60953 191 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 RPS15AP62244 130 aaKnown RBP9.2□□□□□ -0.94
RTF1-206ENST00000560447 YPEL5P62699 121 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 OLR1P78380 273 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 IL1RL1Q01638 556 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 ADAM15Q13444 863 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 NFATC4Q14934 902 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 SHHQ15465 462 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 RPE65Q16518 533 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 NDUFA9Q16795 377 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 PRSS53Q2L4Q9 553 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 EXOC3L2Q2M3D2 409 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 SPDYE7PQ495Y7 208 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 TOR1AIP1Q5JTV8 583 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 ZNF425Q6IV72 752 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 ABHD17CQ6PCB6 329 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 GJD3Q8N144 294 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 SLC5A8Q8N695 610 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 HORMAD2Q8N7B1 307 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 OR2L3Q8NG85 312 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 OR52E1Q8NGJ3 308 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 OR14C36Q8NHC7 312 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 TBC1D15Q8TC07 691 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 NT5CQ8TCD5 201 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 GANCQ8TET4 914 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 PHF10Q8WUB8 498 aaKnown RBP9.2□□□□□ -0.94
RTF1-206ENST00000560447 TRUB1Q8WWH5 349 aaKnown RBP9.2□□□□□ -0.94
RTF1-206ENST00000560447 S100ZQ8WXG8 99 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 FGF14Q92915 247 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 YIPF6Q96EC8 236 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 VMP1Q96GC9 406 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 MSANTD3Q96H12 275 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 CRELD1Q96HD1 420 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 TMEM19Q96HH6 336 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 ZNF354BQ96LW1 612 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 DPH7Q9BTV6 452 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 PBX4Q9BYU1 374 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 S1PR5Q9H228 398 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 NKX2-4Q9H2Z4 354 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 OSGEPL1Q9H4B0 414 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 C8orf33Q9H7E9 229 aaPredicted RBP9.2□□□□□ -0.94
RTF1-206ENST00000560447 LIN28AQ9H9Z2 209 aaKnown RBP9.2□□□□□ -0.94
RTF1-206ENST00000560447 ACOT13Q9NPJ3 140 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 SLC35C2Q9NQQ7 365 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 TM7SF3Q9NS93 570 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 GIMAP4Q9NUV9 329 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 IMP3Q9NV31 184 aaKnown RBP9.2□□□□□ -0.94
RTF1-206ENST00000560447 TBCCD1Q9NVR7 557 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 CNOT2Q9NZN8 540 aaKnown RBP9.2□□□□□ -0.94
RTF1-206ENST00000560447 CALML5Q9NZT1 146 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 SERGEFQ9UGK8 458 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 NDOR1Q9UHB4 597 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 PSORS1C1Q9UIG5 152 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms