RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 OR1D2P34982 312 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 MEP1AQ16819 746 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 SMYD5Q6GMV2 418 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 BRICD5Q6PL45 260 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 SLC22A25Q6T423 547 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 LINGO4Q6UY18 593 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 ZNF610Q8N9Z0 462 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 TXNDC15Q96J42 360 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 NELL2Q99435 816 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 C2orf42Q9NWW7 574 aa13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 ZMAT5Q9UDW3 170 aaKnown RBP13.34□□□□□ -0.27
CSPG4P12-202ENST00000559989 FAM237AA0A1B0GTK4 181 aa13.33□□□□□ -0.27
CSPG4P12-202ENST00000559989 DFNA5O60443 496 aa13.33□□□□□ -0.27
CSPG4P12-202ENST00000559989 GLUD2P49448 558 aa13.33□□□□□ -0.27
CSPG4P12-202ENST00000559989 ARHGAP19Q14CB8 494 aa13.33□□□□□ -0.27
CSPG4P12-202ENST00000559989 NANOS1Q8WY41 292 aaKnown RBP13.33□□□□□ -0.27
CSPG4P12-202ENST00000559989 HSH2DQ96JZ2 352 aa13.33□□□□□ -0.27
CSPG4P12-202ENST00000559989 FAM84AQ96KN4 292 aa13.33□□□□□ -0.27
CSPG4P12-202ENST00000559989 CGREF1Q99674 301 aa13.33□□□□□ -0.27
CSPG4P12-202ENST00000559989 TTTY10Q9BZA0 68 aa13.33□□□□□ -0.27
CSPG4P12-202ENST00000559989 CD8B2A6NJW9 211 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 B4DGG1 531 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 C11orf98E9PRG8 122 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 CD8BP10966 210 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 LAG3P18627 525 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 TAS2R30P59541 319 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 SLC35F1Q5T1Q4 408 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 CARD17Q5XLA6 110 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 DPY19L2P1Q6NXN4 242 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 ZNF100Q8IYN0 542 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 OR6C4Q8NGE1 309 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 REEP4Q9H6H4 257 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 ACSL6Q9UKU0 697 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 UNC119BA6NIH7 251 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 DCNP07585 359 aaKnown RBP13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 GPR143P51810 404 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 CSNK2A1P68400 391 aaPredicted RBP13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 CSNK2A3Q8NEV1 391 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 PTERQ96BW5 349 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 LURAP1Q96LR2 239 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 ADRB2P07550 413 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 CREB1P16220 341 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 CHRNA6Q15825 494 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 MYLK3Q32MK0 819 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 RNASE10Q5GAN6 216 aaKnown RBP13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 XYLT1Q86Y38 959 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 FAM160A2Q8N612 972 aaPredicted RBP13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 IL17RCQ8NAC3 791 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 FAM83FQ8NEG4 500 aaPredicted RBP13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 OR9A4Q8NGU2 314 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 HNRNPABQ99729 332 aaKnown RBP13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 NPFFR2Q9Y5X5 522 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 AFDNP55196 1824 aaKnown RBP13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 LRP5LA4QPB2 252 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 H7C1Q1 480 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 SPATA31D3P0C874 917 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 CYBRD1Q53TN4 286 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 FRG2Q64ET8 278 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 ENPP7Q6UWV6 458 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 SPATA31D4Q6ZUB0 917 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 KIAA0907Q7Z7F0 614 aaPredicted RBP13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 METTL4Q8N3J2 472 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 TSPEARQ8WU66 669 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 FRG2BQ96QU4 278 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 PSD2Q9BQI7 771 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 CCM2Q9BSQ5 444 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 OR2AG1Q9H205 316 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 NDRG2Q9UN36 371 aaKnown RBP13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 AMY2AP04746 511 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 KITLGP21583 273 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 MAT2AP31153 395 aaKnown RBP13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 NFATC2Q13469 925 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 STEAP4Q687X5 459 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 OR51G2Q8NGK0 314 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 ZFAND2BQ8WV99 257 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 AKTIPQ9H8T0 292 aa13.33□□□□□ -0.28
CSPG4P12-202ENST00000559989 H0Y8G0 127 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 GRM5P41594 1212 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 OR51T1Q8NGJ9 327 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 OR1J4Q8NGS1 313 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 IMPA2O14732 288 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 GAS6Q14393 721 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 GBX1Q14549 363 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 ZNF630Q2M218 657 aaPredicted RBP13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 PLPPR4Q7Z2D5 763 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 GKN2Q86XP6 184 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 SVBPQ8N300 66 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 UHRF2Q96PU4 802 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 PITX2Q99697 317 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 SLC6A17Q9H1V8 727 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 RNF19AQ9NV58 838 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 SAGE1Q9NXZ1 904 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 GJD2Q9UKL4 321 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 MEIS2O14770 477 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 OPN1SWP03999 348 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 ALDOBP05062 364 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 EIF4EP06730 217 aaKnown RBP13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 SNU13P55769 128 aaKnown RBP13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 RHBDL3P58872 404 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 SLC18B1Q6NT16 456 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms