RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 ZFP64Q9NPA5 681 aa8.47□□□□□ -1.05
HDDC3-204ENST00000559834 ACKR4Q9NPB9 350 aa8.47□□□□□ -1.05
HDDC3-204ENST00000559834 QPCTLQ9NXS2 382 aa8.47□□□□□ -1.05
HDDC3-204ENST00000559834 TUBA8Q9NY65 449 aaPredicted RBP8.47□□□□□ -1.05
HDDC3-204ENST00000559834 CNIH4Q9P003 139 aa8.47□□□□□ -1.05
HDDC3-204ENST00000559834 ADGRE2Q9UHX3 823 aa8.47□□□□□ -1.05
HDDC3-204ENST00000559834 PTBP2Q9UKA9 531 aaKnown RBP8.47□□□□□ -1.05
HDDC3-204ENST00000559834 L3MBTL1Q9Y468 752 aa8.47□□□□□ -1.05
HDDC3-204ENST00000559834 IQANK1A0A1B0GTG1 560 aa8.46□□□□□ -1.06
HDDC3-204ENST00000559834 CCNT2O60583 730 aaKnown RBP8.46□□□□□ -1.06
HDDC3-204ENST00000559834 TBX6O95947 436 aaPredicted RBP8.46□□□□□ -1.06
HDDC3-204ENST00000559834 TGFB1P01137 390 aa8.46□□□□□ -1.06
HDDC3-204ENST00000559834 CCDC166P0CW27 439 aa8.46□□□□□ -1.06
HDDC3-204ENST00000559834 STMN1P16949 149 aa8.46□□□□□ -1.06
HDDC3-204ENST00000559834 HIST1H1TP22492 207 aaPredicted RBP8.46□□□□□ -1.06
HDDC3-204ENST00000559834 DNASE1P24855 282 aa8.46□□□□□ -1.06
HDDC3-204ENST00000559834 PIGAP37287 484 aa8.46□□□□□ -1.06
HDDC3-204ENST00000559834 ADH7P40394 386 aa8.46□□□□□ -1.06
HDDC3-204ENST00000559834 CASP2P42575 452 aa8.46□□□□□ -1.06
HDDC3-204ENST00000559834 SSR2P43308 183 aa8.46□□□□□ -1.06
HDDC3-204ENST00000559834 STT3AP46977 705 aa8.46□□□□□ -1.06
HDDC3-204ENST00000559834 DLX5P56178 289 aa8.46□□□□□ -1.06
HDDC3-204ENST00000559834 ID2Q02363 134 aa8.46□□□□□ -1.06
HDDC3-204ENST00000559834 SLAMF1Q13291 335 aa8.46□□□□□ -1.06
HDDC3-204ENST00000559834 OR4C11Q6IEV9 310 aa8.46□□□□□ -1.06
HDDC3-204ENST00000559834 MED27Q6P2C8 311 aa8.46□□□□□ -1.06
HDDC3-204ENST00000559834 UBE3DQ7Z6J8 389 aa8.46□□□□□ -1.06
HDDC3-204ENST00000559834 LIX1LQ8IVB5 337 aa8.46□□□□□ -1.06
HDDC3-204ENST00000559834 ZZZ3Q8IYH5 903 aa8.46□□□□□ -1.06
HDDC3-204ENST00000559834 FBXW8Q8N3Y1 598 aa8.46□□□□□ -1.06
HDDC3-204ENST00000559834 SPATA6LQ8N4H0 392 aa8.46□□□□□ -1.06
HDDC3-204ENST00000559834 ZNF321PQ8N8H1 164 aa8.46□□□□□ -1.06
HDDC3-204ENST00000559834 BBOF1Q8ND07 529 aa8.46□□□□□ -1.06
HDDC3-204ENST00000559834 NEIL3Q8TAT5 605 aa8.46□□□□□ -1.06
HDDC3-204ENST00000559834 STAG3L4Q8TBR4 150 aa8.46□□□□□ -1.06
HDDC3-204ENST00000559834 PAQR8Q8TEZ7 354 aa8.46□□□□□ -1.06
HDDC3-204ENST00000559834 ZNF473Q8WTR7 871 aaKnown RBP8.46□□□□□ -1.06
HDDC3-204ENST00000559834 NRGNQ92686 78 aa8.46□□□□□ -1.06
HDDC3-204ENST00000559834 ESAMQ96AP7 390 aa8.46□□□□□ -1.06
HDDC3-204ENST00000559834 SPACA9Q96E40 222 aaPredicted RBP8.46□□□□□ -1.06
HDDC3-204ENST00000559834 CMTM7Q96FZ5 175 aa8.46□□□□□ -1.06
HDDC3-204ENST00000559834 RMND5BQ96G75 393 aaPredicted RBP8.46□□□□□ -1.06
HDDC3-204ENST00000559834 POM121Q96HA1 1249 aa8.46□□□□□ -1.06
HDDC3-204ENST00000559834 PELOQ9BRX2 385 aaKnown RBP8.46□□□□□ -1.06
HDDC3-204ENST00000559834 WDR83Q9BRX9 315 aaKnown RBP8.46□□□□□ -1.06
HDDC3-204ENST00000559834 TMEM79Q9BSE2 394 aa8.46□□□□□ -1.06
HDDC3-204ENST00000559834 CNPPD1Q9BV87 410 aa8.46□□□□□ -1.06
HDDC3-204ENST00000559834 MS4A8Q9BY19 250 aa8.46□□□□□ -1.06
HDDC3-204ENST00000559834 CD244Q9BZW8 370 aa8.46□□□□□ -1.06
HDDC3-204ENST00000559834 CXXC4Q9H2H0 198 aa8.46□□□□□ -1.06
HDDC3-204ENST00000559834 SEMA4BQ9NPR2 832 aaPredicted RBP8.46□□□□□ -1.06
HDDC3-204ENST00000559834 RASSF1Q9NS23 344 aa8.46□□□□□ -1.06
HDDC3-204ENST00000559834 CCM2LQ9NUG4 571 aaPredicted RBP8.46□□□□□ -1.06
HDDC3-204ENST00000559834 FOXD3Q9UJU5 478 aaPredicted RBP8.46□□□□□ -1.06
HDDC3-204ENST00000559834 RNF112Q9ULX5 631 aa8.46□□□□□ -1.06
HDDC3-204ENST00000559834 MTO1Q9Y2Z2 717 aaKnown RBP8.46□□□□□ -1.06
HDDC3-204ENST00000559834 LIPGQ9Y5X9 500 aa8.46□□□□□ -1.06
HDDC3-204ENST00000559834 PRRC2AP48634 2157 aaKnown RBP8.46□□□□□ -1.06
HDDC3-204ENST00000559834 CSMD1Q96PZ7 3565 aa8.46□□□□□ -1.06
HDDC3-204ENST00000559834 EFCAB8A8MWE9 144 aa8.45□□□□□ -1.06
HDDC3-204ENST00000559834 CAPN14A8MX76 684 aa8.45□□□□□ -1.06
HDDC3-204ENST00000559834 E7ESA3 106 aa8.45□□□□□ -1.06
HDDC3-204ENST00000559834 RTCAO00442 366 aaKnown RBP8.45□□□□□ -1.06
HDDC3-204ENST00000559834 DVL2O14641 736 aa8.45□□□□□ -1.06
HDDC3-204ENST00000559834 FGF17O60258 216 aa8.45□□□□□ -1.06
HDDC3-204ENST00000559834 ZNF354AO60765 605 aaPredicted RBP8.45□□□□□ -1.06
HDDC3-204ENST00000559834 PRAMEF4O60810 478 aa8.45□□□□□ -1.06
HDDC3-204ENST00000559834 SEC31AO94979 1220 aaKnown RBP8.45□□□□□ -1.06
HDDC3-204ENST00000559834 SCELO95171 688 aa8.45□□□□□ -1.06
HDDC3-204ENST00000559834 IGKV3-11P04433 115 aa8.45□□□□□ -1.06
HDDC3-204ENST00000559834 CELA3AP09093 270 aa8.45□□□□□ -1.06
HDDC3-204ENST00000559834 PCNAP12004 261 aa8.45□□□□□ -1.06
HDDC3-204ENST00000559834 FOSL1P15407 271 aa8.45□□□□□ -1.06
HDDC3-204ENST00000559834 CD1DP15813 335 aa8.45□□□□□ -1.06
HDDC3-204ENST00000559834 ALOX15P16050 662 aaPredicted RBP8.45□□□□□ -1.06
HDDC3-204ENST00000559834 KLK2P20151 261 aa8.45□□□□□ -1.06
HDDC3-204ENST00000559834 CD22P20273 847 aa8.45□□□□□ -1.06
HDDC3-204ENST00000559834 UQCRC1P31930 480 aa8.45□□□□□ -1.06
HDDC3-204ENST00000559834 RPL21P46778 160 aaKnown RBP8.45□□□□□ -1.06
HDDC3-204ENST00000559834 RAP1GDS1P52306 607 aa8.45□□□□□ -1.06
HDDC3-204ENST00000559834 DGKQP52824 942 aa8.45□□□□□ -1.06
HDDC3-204ENST00000559834 ARFIP1P53367 373 aa8.45□□□□□ -1.06
HDDC3-204ENST00000559834 IGLV3-21P80748 117 aaPredicted RBP8.45□□□□□ -1.06
HDDC3-204ENST00000559834 PLIN5Q00G26 463 aa8.45□□□□□ -1.06
HDDC3-204ENST00000559834 CBLBQ13191 982 aa8.45□□□□□ -1.06
HDDC3-204ENST00000559834 FBXO48Q5FWF7 155 aa8.45□□□□□ -1.06
HDDC3-204ENST00000559834 TBCELQ5QJ74 424 aa8.45□□□□□ -1.06
HDDC3-204ENST00000559834 DEPDC1Q5TB30 811 aa8.45□□□□□ -1.06
HDDC3-204ENST00000559834 PRAMEF9Q5VWM5 478 aa8.45□□□□□ -1.06
HDDC3-204ENST00000559834 KHDRBS2Q5VWX1 349 aaKnown RBP8.45□□□□□ -1.06
HDDC3-204ENST00000559834 TMEM198Q66K66 360 aa8.45□□□□□ -1.06
HDDC3-204ENST00000559834 ADNP2Q6IQ32 1131 aa8.45□□□□□ -1.06
HDDC3-204ENST00000559834 ZNF793Q6ZN11 406 aa8.45□□□□□ -1.06
HDDC3-204ENST00000559834 CYS1Q717R9 158 aa8.45□□□□□ -1.06
HDDC3-204ENST00000559834 SLC29A4Q7RTT9 530 aa8.45□□□□□ -1.06
HDDC3-204ENST00000559834 LRRC70Q7Z2Q7 622 aa8.45□□□□□ -1.06
HDDC3-204ENST00000559834 MAATS1Q7Z4T9 603 aa8.45□□□□□ -1.06
HDDC3-204ENST00000559834 CAMKMTQ7Z624 323 aa8.45□□□□□ -1.06
HDDC3-204ENST00000559834 GPR180Q86V85 440 aa8.45□□□□□ -1.06
HDDC3-204ENST00000559834 OR4N5Q8IXE1 308 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms