RNA–Protein interactions for RNA: ENST00000559663.1

CDK12-205, Transcript of cyclin dependent kinase 12, humanhuman

TSL 5

Gene CDK12, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-205ENST00000559663 ZNF721Q8TF20 911 aa7.47□□□□□ -1.21
CDK12-205ENST00000559663 CCT6BQ92526 530 aa7.47□□□□□ -1.21
CDK12-205ENST00000559663 SPACA9Q96E40 222 aaPredicted RBP7.47□□□□□ -1.21
CDK12-205ENST00000559663 HSPBAP1Q96EW2 488 aa7.47□□□□□ -1.21
CDK12-205ENST00000559663 RUNDC3BQ96NL0 473 aa7.47□□□□□ -1.21
CDK12-205ENST00000559663 YIPF4Q9BSR8 244 aa7.47□□□□□ -1.21
CDK12-205ENST00000559663 PITHD1Q9GZP4 211 aaPredicted RBP7.47□□□□□ -1.21
CDK12-205ENST00000559663 PRDM14Q9GZV8 571 aa7.47□□□□□ -1.21
CDK12-205ENST00000559663 NT5DC2Q9H857 520 aa7.47□□□□□ -1.21
CDK12-205ENST00000559663 ZNF395Q9H8N7 513 aaPredicted RBP7.47□□□□□ -1.21
CDK12-205ENST00000559663 COPS7BQ9H9Q2 264 aaPredicted RBP7.47□□□□□ -1.21
CDK12-205ENST00000559663 LYRM4Q9HD34 91 aa7.47□□□□□ -1.21
CDK12-205ENST00000559663 JKAMPQ9P055 326 aa7.47□□□□□ -1.21
CDK12-205ENST00000559663 SLC17A6Q9P2U8 582 aa7.47□□□□□ -1.21
CDK12-205ENST00000559663 CORO1CQ9ULV4 474 aaPredicted RBP7.47□□□□□ -1.21
CDK12-205ENST00000559663 VWA7Q9Y334 891 aa7.47□□□□□ -1.21
CDK12-205ENST00000559663 CHCHD2Q9Y6H1 151 aaPredicted RBP7.47□□□□□ -1.21
CDK12-205ENST00000559663 DNAJC13O75165 2243 aa7.47□□□□□ -1.21
CDK12-205ENST00000559663 A0A1W2PPR1 153 aa7.46□□□□□ -1.22
CDK12-205ENST00000559663 NPEPPSL1A6NEC2 478 aa7.46□□□□□ -1.22
CDK12-205ENST00000559663 EEF1E1-BLOC1S5C9J1V9 151 aa7.46□□□□□ -1.22
CDK12-205ENST00000559663 CDC7O00311 574 aa7.46□□□□□ -1.22
CDK12-205ENST00000559663 EEF1E1O43324 174 aaKnown RBP7.46□□□□□ -1.22
CDK12-205ENST00000559663 LDB3O75112 727 aa7.46□□□□□ -1.22
CDK12-205ENST00000559663 WDR47O94967 919 aa7.46□□□□□ -1.22
CDK12-205ENST00000559663 TTC4O95801 387 aa7.46□□□□□ -1.22
CDK12-205ENST00000559663 FBXO45P0C2W1 286 aa7.46□□□□□ -1.22
CDK12-205ENST00000559663 COX7A2P14406 83 aa7.46□□□□□ -1.22
CDK12-205ENST00000559663 ZNF37AP17032 561 aaPredicted RBP7.46□□□□□ -1.22
CDK12-205ENST00000559663 GDF1P27539 372 aa7.46□□□□□ -1.22
CDK12-205ENST00000559663 STT3AP46977 705 aa7.46□□□□□ -1.22
CDK12-205ENST00000559663 TRPC1P48995 793 aa7.46□□□□□ -1.22
CDK12-205ENST00000559663 IGLV3-21P80748 117 aaPredicted RBP7.46□□□□□ -1.22
CDK12-205ENST00000559663 ID2Q02363 134 aa7.46□□□□□ -1.22
CDK12-205ENST00000559663 DUSP8Q13202 625 aa7.46□□□□□ -1.22
CDK12-205ENST00000559663 SF3B4Q15427 424 aaKnown RBP eCLIP7.46□□□□□ -1.22
CDK12-205ENST00000559663 SPANXN3Q5MJ09 141 aa7.46□□□□□ -1.22
CDK12-205ENST00000559663 Q5PR19 223 aa7.46□□□□□ -1.22
CDK12-205ENST00000559663 NSUN5P2Q63ZY6 315 aa7.46□□□□□ -1.22
CDK12-205ENST00000559663 ADNP2Q6IQ32 1131 aa7.46□□□□□ -1.22
CDK12-205ENST00000559663 CXXC5Q7LFL8 322 aaKnown RBP7.46□□□□□ -1.22
CDK12-205ENST00000559663 PM20D2Q8IYS1 436 aa7.46□□□□□ -1.22
CDK12-205ENST00000559663 LRRC75A-AS1Q8N1F1 130 aa7.46□□□□□ -1.22
CDK12-205ENST00000559663 SLC15A4Q8N697 577 aa7.46□□□□□ -1.22
CDK12-205ENST00000559663 C7orf57Q8NEG2 295 aa7.46□□□□□ -1.22
CDK12-205ENST00000559663 OR10G3Q8NGC4 313 aa7.46□□□□□ -1.22
CDK12-205ENST00000559663 SPATA3Q8NHX4 192 aa7.46□□□□□ -1.22
CDK12-205ENST00000559663 SMPDL3BQ92485 455 aa7.46□□□□□ -1.22
CDK12-205ENST00000559663 ANKRD7Q92527 254 aa7.46□□□□□ -1.22
CDK12-205ENST00000559663 ANKRD9Q96BM1 317 aaPredicted RBP7.46□□□□□ -1.22
CDK12-205ENST00000559663 SENP5Q96HI0 755 aaPredicted RBP7.46□□□□□ -1.22
CDK12-205ENST00000559663 DACH2Q96NX9 599 aa7.46□□□□□ -1.22
CDK12-205ENST00000559663 TIMP4Q99727 224 aa7.46□□□□□ -1.22
CDK12-205ENST00000559663 EGFL8Q99944 293 aa7.46□□□□□ -1.22
CDK12-205ENST00000559663 WDR83Q9BRX9 315 aaKnown RBP7.46□□□□□ -1.22
CDK12-205ENST00000559663 DOHHQ9BU89 302 aa7.46□□□□□ -1.22
CDK12-205ENST00000559663 REPIN1Q9BWE0 567 aaKnown RBP7.46□□□□□ -1.22
CDK12-205ENST00000559663 RBSNQ9H1K0 784 aa7.46□□□□□ -1.22
CDK12-205ENST00000559663 EHD1Q9H4M9 534 aa7.46□□□□□ -1.22
CDK12-205ENST00000559663 PRDM7Q9NQW5 492 aa7.46□□□□□ -1.22
CDK12-205ENST00000559663 RYDENQ9NUL5 291 aaKnown RBP7.46□□□□□ -1.22
CDK12-205ENST00000559663 GPRC5BQ9NZH0 403 aa7.46□□□□□ -1.22
CDK12-205ENST00000559663 CNIH4Q9P003 139 aa7.46□□□□□ -1.22
CDK12-205ENST00000559663 CNOT11Q9UKZ1 510 aaKnown RBP7.46□□□□□ -1.22
CDK12-205ENST00000559663 OARD1Q9Y530 152 aa7.46□□□□□ -1.22
CDK12-205ENST00000559663 CSPG4Q6UVK1 2322 aa7.46□□□□□ -1.22
CDK12-205ENST00000559663 COL6A5A8TX70 2615 aa7.46□□□□□ -1.22
CDK12-205ENST00000559663 ANK2Q01484 3957 aa7.45□□□□□ -1.22
CDK12-205ENST00000559663 CUBNO60494 3623 aa7.45□□□□□ -1.22
CDK12-205ENST00000559663 ATRQ13535 2644 aa7.45□□□□□ -1.22
CDK12-205ENST00000559663 ANKRD33BA6NCL7 494 aa7.45□□□□□ -1.22
CDK12-205ENST00000559663 MBD3L4A6NDZ8 208 aaPredicted RBP7.45□□□□□ -1.22
CDK12-205ENST00000559663 MBD3L3A6NE82 208 aaPredicted RBP7.45□□□□□ -1.22
CDK12-205ENST00000559663 ANKDD1BA6NHY2 528 aa7.45□□□□□ -1.22
CDK12-205ENST00000559663 MBD3L5A6NJ08 208 aaPredicted RBP7.45□□□□□ -1.22
CDK12-205ENST00000559663 CD8B2A6NJW9 211 aa7.45□□□□□ -1.22
CDK12-205ENST00000559663 H7C1Q1 480 aa7.45□□□□□ -1.22
CDK12-205ENST00000559663 ARHGEF9O43307 516 aa7.45□□□□□ -1.22
CDK12-205ENST00000559663 FGF17O60258 216 aa7.45□□□□□ -1.22
CDK12-205ENST00000559663 TRIM3O75382 744 aaPredicted RBP7.45□□□□□ -1.22
CDK12-205ENST00000559663 SCELO95171 688 aa7.45□□□□□ -1.22
CDK12-205ENST00000559663 LRATO95237 230 aa7.45□□□□□ -1.22
CDK12-205ENST00000559663 IL18BPO95998 194 aa7.45□□□□□ -1.22
CDK12-205ENST00000559663 C1QAP02745 245 aa7.45□□□□□ -1.22
CDK12-205ENST00000559663 HPNP05981 417 aa7.45□□□□□ -1.22
CDK12-205ENST00000559663 CTSSP25774 331 aa7.45□□□□□ -1.22
CDK12-205ENST00000559663 PCSK6P29122 969 aa7.45□□□□□ -1.22
CDK12-205ENST00000559663 SERPINB3P29508 390 aa7.45□□□□□ -1.22
CDK12-205ENST00000559663 CXCR5P32302 372 aa7.45□□□□□ -1.22
CDK12-205ENST00000559663 OPRM1P35372 400 aa7.45□□□□□ -1.22
CDK12-205ENST00000559663 GDF5P43026 501 aa7.45□□□□□ -1.22
CDK12-205ENST00000559663 KCNC1P48547 511 aa7.45□□□□□ -1.22
CDK12-205ENST00000559663 TGM3Q08188 693 aa7.45□□□□□ -1.22
CDK12-205ENST00000559663 POU4F3Q15319 338 aa7.45□□□□□ -1.22
CDK12-205ENST00000559663 NTRK2Q16620 822 aa7.45□□□□□ -1.22
CDK12-205ENST00000559663 C18orf21Q32NC0 220 aaPredicted RBP7.45□□□□□ -1.22
CDK12-205ENST00000559663 NHSL2Q5HYW2 709 aa7.45□□□□□ -1.22
CDK12-205ENST00000559663 TBCELQ5QJ74 424 aa7.45□□□□□ -1.22
CDK12-205ENST00000559663 TEDDM1Q5T9Z0 273 aa7.45□□□□□ -1.22
CDK12-205ENST00000559663 RNASEH2BQ5TBB1 312 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms