RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 BTN3A2P78410 334 aa8.8□□□□□ -1
SMAD3-211ENST00000559460 ZBED6P86452 979 aa8.8□□□□□ -1
SMAD3-211ENST00000559460 LOXL1Q08397 574 aaPredicted RBP8.8□□□□□ -1
SMAD3-211ENST00000559460 SERTAD2Q14140 314 aa8.8□□□□□ -1
SMAD3-211ENST00000559460 SLC18A3Q16572 532 aa8.8□□□□□ -1
SMAD3-211ENST00000559460 STX1AQ16623 288 aa8.8□□□□□ -1
SMAD3-211ENST00000559460 NRF1Q16656 503 aa8.8□□□□□ -1
SMAD3-211ENST00000559460 EIPR1Q53HC9 387 aa8.8□□□□□ -1
SMAD3-211ENST00000559460 FAM120AOSQ5T036 256 aa8.8□□□□□ -1
SMAD3-211ENST00000559460 MRNIPQ6NTE8 343 aa8.8□□□□□ -1
SMAD3-211ENST00000559460 ABHD17CQ6PCB6 329 aa8.8□□□□□ -1
SMAD3-211ENST00000559460 ADGRD1Q6QNK2 874 aa8.8□□□□□ -1
SMAD3-211ENST00000559460 LCTLQ6UWM7 567 aa8.8□□□□□ -1
SMAD3-211ENST00000559460 CLEC17AQ6ZS10 378 aa8.8□□□□□ -1
SMAD3-211ENST00000559460 CILP2Q8IUL8 1156 aa8.8□□□□□ -1
SMAD3-211ENST00000559460 PALM2Q8IXS6 379 aa8.8□□□□□ -1
SMAD3-211ENST00000559460 KLHDC8BQ8IXV7 354 aa8.8□□□□□ -1
SMAD3-211ENST00000559460 KATNAL2Q8IYT4 538 aa8.8□□□□□ -1
SMAD3-211ENST00000559460 NUBPLQ8TB37 319 aa8.8□□□□□ -1
SMAD3-211ENST00000559460 ATL1Q8WXF7 558 aa8.8□□□□□ -1
SMAD3-211ENST00000559460 ZNF845Q96IR2 970 aaPredicted RBP8.8□□□□□ -1
SMAD3-211ENST00000559460 LCORQ96JN0 433 aaPredicted RBP8.8□□□□□ -1
SMAD3-211ENST00000559460 MARK4Q96L34 752 aa8.8□□□□□ -1
SMAD3-211ENST00000559460 ZNF778Q96MU6 729 aa8.8□□□□□ -1
SMAD3-211ENST00000559460 FAM118BQ9BPY3 351 aa8.8□□□□□ -1
SMAD3-211ENST00000559460 OPN3Q9H1Y3 402 aaPredicted RBP8.8□□□□□ -1
SMAD3-211ENST00000559460 FANCFQ9NPI8 374 aa8.8□□□□□ -1
SMAD3-211ENST00000559460 RYDENQ9NUL5 291 aaKnown RBP8.8□□□□□ -1
SMAD3-211ENST00000559460 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.8□□□□□ -12e-6■□□□□ 8.8
SMAD3-211ENST00000559460 C15orf41Q9Y2V0 281 aa8.8□□□□□ -1
SMAD3-211ENST00000559460 TCAF1Q9Y4C2 921 aa8.8□□□□□ -1
SMAD3-211ENST00000559460 CHCHD2Q9Y6H1 151 aaPredicted RBP8.8□□□□□ -1
SMAD3-211ENST00000559460 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.8□□□□□ -15e-7■■■■□ 20.6
SMAD3-211ENST00000559460 IGHV4-30-2A0A087WSY4 118 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 MYOCOSA0A1B0GUC4 107 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 ERI2A8K979 691 aaKnown RBP8.79□□□□□ -1
SMAD3-211ENST00000559460 OVOL3O00110 214 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 CLOCKO15516 846 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 B3GALT2O43825 422 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 TRIM3O75382 744 aaPredicted RBP8.79□□□□□ -1
SMAD3-211ENST00000559460 METTL18O95568 372 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 SERPINC1P01008 464 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 MPC1LP0DKB6 136 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 ENO3P13929 434 aaPredicted RBP8.79□□□□□ -1
SMAD3-211ENST00000559460 CPN1P15169 458 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 SLC25A16P16260 332 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 ITGA2P17301 1181 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 TBXA2RP21731 343 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 IGFBP5P24593 272 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 AHRP35869 848 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 SKIV2L2P42285 1042 aaKnown RBP8.79□□□□□ -1
SMAD3-211ENST00000559460 GZMKP49863 264 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 NAGLUP54802 743 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 NAE1Q13564 534 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 CSHL1Q14406 222 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 EFTUD2Q15029 972 aaKnown RBP eCLIP8.79□□□□□ -16e-7■■■■■ 47.1
SMAD3-211ENST00000559460 TOR1AIP1Q5JTV8 583 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 HIST2H2BDQ6DRA6 164 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 AGTRAPQ6RW13 159 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 PLXDC2Q6UX71 529 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 SLC29A4Q7RTT9 530 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 STRA8Q7Z7C7 330 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 WFDC8Q8IUA0 241 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.79□□□□□ -1
SMAD3-211ENST00000559460 ZNF321PQ8N8H1 164 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 PRELID2Q8N945 189 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 C7orf57Q8NEG2 295 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 SMAP2Q8WU79 429 aaPredicted RBP8.79□□□□□ -1
SMAD3-211ENST00000559460 PTPMT1Q8WUK0 201 aaPredicted RBP8.79□□□□□ -1
SMAD3-211ENST00000559460 ASB11Q8WXH4 323 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 RILPQ96NA2 401 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 GNRHR2Q96P88 292 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 GAL3ST4Q96RP7 486 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 TACO1Q9BSH4 297 aaKnown RBP8.79□□□□□ -1
SMAD3-211ENST00000559460 NPLQ9BXD5 320 aaPredicted RBP8.79□□□□□ -1
SMAD3-211ENST00000559460 ALOXE3Q9BYJ1 711 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 CCDC68Q9H2F9 335 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 DNAJC11Q9NVH1 559 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 CLCF1Q9UBD9 225 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 PTBP2Q9UKA9 531 aaKnown RBP8.79□□□□□ -1
SMAD3-211ENST00000559460 AMFRQ9UKV5 643 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 CNOT11Q9UKZ1 510 aaKnown RBP8.79□□□□□ -1
SMAD3-211ENST00000559460 SH2B3Q9UQQ2 575 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 CRYL1Q9Y2S2 319 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 IKBKGQ9Y6K9 419 aa8.79□□□□□ -1
SMAD3-211ENST00000559460 ANKRD33BA6NCL7 494 aa8.78□□□□□ -1
SMAD3-211ENST00000559460 TGFBR3LH3BV60 316 aa8.78□□□□□ -1
SMAD3-211ENST00000559460 AKR1B10O60218 316 aa8.78□□□□□ -1
SMAD3-211ENST00000559460 SOD3P08294 240 aa8.78□□□□□ -1
SMAD3-211ENST00000559460 FBXO45P0C2W1 286 aa8.78□□□□□ -1
SMAD3-211ENST00000559460 TMED10P49755 219 aaKnown RBP8.78□□□□□ -1
SMAD3-211ENST00000559460 COPS2P61201 443 aa8.78□□□□□ -1
SMAD3-211ENST00000559460 CUL1Q13616 776 aa8.78□□□□□ -1
SMAD3-211ENST00000559460 FGFBP1Q14512 234 aa8.78□□□□□ -1
SMAD3-211ENST00000559460 RBBP5Q15291 538 aaKnown RBP8.78□□□□□ -1
SMAD3-211ENST00000559460 PDCD2Q16342 344 aaPredicted RBP8.78□□□□□ -1
SMAD3-211ENST00000559460 EXOC3L2Q2M3D2 409 aa8.78□□□□□ -1
SMAD3-211ENST00000559460 ALKBH2Q6NS38 261 aa8.78□□□□□ -1
SMAD3-211ENST00000559460 VWA1Q6PCB0 445 aa8.78□□□□□ -1
SMAD3-211ENST00000559460 ZNF474Q6S9Z5 364 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms