RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 HSD17B7P56937 341 aa10.2□□□□□ -0.78
TPM1-217ENST00000559108 SKP1P63208 163 aa10.2□□□□□ -0.78
TPM1-217ENST00000559108 SLC13A2Q13183 592 aa10.2□□□□□ -0.78
TPM1-217ENST00000559108 ATMQ13315 3056 aa10.2□□□□□ -0.78
TPM1-217ENST00000559108 NSDHLQ15738 373 aa10.2□□□□□ -0.78
TPM1-217ENST00000559108 HSP90B2PQ58FF3 399 aa10.2□□□□□ -0.78
TPM1-217ENST00000559108 IL23RQ5VWK5 629 aa10.2□□□□□ -0.78
TPM1-217ENST00000559108 TMEM198Q66K66 360 aa10.2□□□□□ -0.78
TPM1-217ENST00000559108 SLC48A1Q6P1K1 146 aa10.2□□□□□ -0.78
TPM1-217ENST00000559108 PAGE2Q7Z2X7 111 aa10.2□□□□□ -0.78
TPM1-217ENST00000559108 KRTCAP2Q8N6L1 136 aa10.2□□□□□ -0.78
TPM1-217ENST00000559108 RFWD2Q8NHY2 731 aa10.2□□□□□ -0.78
TPM1-217ENST00000559108 CDC26Q8NHZ8 85 aa10.2□□□□□ -0.78
TPM1-217ENST00000559108 PIWIL2Q8TC59 973 aaKnown RBP10.2□□□□□ -0.78
TPM1-217ENST00000559108 DYDC1Q8WWB3 177 aa10.2□□□□□ -0.78
TPM1-217ENST00000559108 PSMF1Q92530 271 aa10.2□□□□□ -0.78
TPM1-217ENST00000559108 GFM2Q969S9 779 aaKnown RBP10.2□□□□□ -0.78
TPM1-217ENST00000559108 PPWD1Q96BP3 646 aaKnown RBP10.2□□□□□ -0.78
TPM1-217ENST00000559108 TUBGCP3Q96CW5 907 aa10.2□□□□□ -0.78
TPM1-217ENST00000559108 MARK4Q96L34 752 aa10.2□□□□□ -0.78
TPM1-217ENST00000559108 ZNF681Q96N22 645 aa10.2□□□□□ -0.78
TPM1-217ENST00000559108 TSSK3Q96PN8 268 aa10.2□□□□□ -0.78
TPM1-217ENST00000559108 EFHD1Q9BUP0 239 aa10.2□□□□□ -0.78
TPM1-217ENST00000559108 ZNF700Q9H0M5 742 aa10.2□□□□□ -0.78
TPM1-217ENST00000559108 ZNF160Q9HCG1 818 aa10.2□□□□□ -0.78
TPM1-217ENST00000559108 MYNNQ9NPC7 610 aa10.2□□□□□ -0.78
TPM1-217ENST00000559108 AHSPQ9NZD4 102 aa10.2□□□□□ -0.78
TPM1-217ENST00000559108 PHF11Q9UIL8 331 aa10.2□□□□□ -0.78
TPM1-217ENST00000559108 MMACHCQ9Y4U1 282 aa10.2□□□□□ -0.78
TPM1-217ENST00000559108 USH1CQ9Y6N9 552 aa10.2□□□□□ -0.78
TPM1-217ENST00000559108 EXPH5Q8NEV8 1989 aa10.19□□□□□ -0.78
TPM1-217ENST00000559108 MAN1A2O60476 641 aa10.19□□□□□ -0.78
TPM1-217ENST00000559108 DDAH2O95865 285 aa10.19□□□□□ -0.78
TPM1-217ENST00000559108 CLPSP04118 112 aa10.19□□□□□ -0.78
TPM1-217ENST00000559108 CT62P0C5K7 136 aa10.19□□□□□ -0.78
TPM1-217ENST00000559108 G6PDP11413 515 aa10.19□□□□□ -0.78
TPM1-217ENST00000559108 MDH1P40925 334 aaKnown RBP10.19□□□□□ -0.78
TPM1-217ENST00000559108 IDH3AP50213 366 aa10.19□□□□□ -0.78
TPM1-217ENST00000559108 GPR143P51810 404 aa10.19□□□□□ -0.78
TPM1-217ENST00000559108 UCNP55089 124 aa10.19□□□□□ -0.78
TPM1-217ENST00000559108 ZNF763Q0D2J5 394 aa10.19□□□□□ -0.78
TPM1-217ENST00000559108 MGAT2Q10469 447 aa10.19□□□□□ -0.78
TPM1-217ENST00000559108 SF3A3Q12874 501 aaKnown RBP eCLIP10.19□□□□□ -0.789e-9■■■■□ 23.4
TPM1-217ENST00000559108 DUSP8Q13202 625 aa10.19□□□□□ -0.78
TPM1-217ENST00000559108 RAPSNQ13702 412 aa10.19□□□□□ -0.78
TPM1-217ENST00000559108 LTB4RQ15722 352 aa10.19□□□□□ -0.78
TPM1-217ENST00000559108 DCAF10Q5QP82 559 aa10.19□□□□□ -0.78
TPM1-217ENST00000559108 PAPD4Q6PIY7 484 aaKnown RBP10.19□□□□□ -0.78
TPM1-217ENST00000559108 EPGNQ6UW88 154 aa10.19□□□□□ -0.78
TPM1-217ENST00000559108 CPEB2Q7Z5Q1 589 aaKnown RBP10.19□□□□□ -0.78
TPM1-217ENST00000559108 RAB43Q86YS6 212 aa10.19□□□□□ -0.78
TPM1-217ENST00000559108 LIX1Q8N485 282 aa10.19□□□□□ -0.78
TPM1-217ENST00000559108 KIF2BQ8N4N8 673 aa10.19□□□□□ -0.78
TPM1-217ENST00000559108 FAM76AQ8TAV0 307 aa10.19□□□□□ -0.78
TPM1-217ENST00000559108 ADAMTS18Q8TE60 1221 aa10.19□□□□□ -0.78
TPM1-217ENST00000559108 PTPMT1Q8WUK0 201 aaPredicted RBP10.19□□□□□ -0.78
TPM1-217ENST00000559108 CNRIP1Q96F85 164 aaPredicted RBP10.19□□□□□ -0.78
TPM1-217ENST00000559108 TEX37Q96LM6 180 aa10.19□□□□□ -0.78
TPM1-217ENST00000559108 PPP3R2Q96LZ3 170 aa10.19□□□□□ -0.78
TPM1-217ENST00000559108 ZNF317Q96PQ6 595 aaPredicted RBP10.19□□□□□ -0.78
TPM1-217ENST00000559108 NPAS2Q99743 824 aa10.19□□□□□ -0.78
TPM1-217ENST00000559108 CCT7Q99832 543 aa10.19□□□□□ -0.78
TPM1-217ENST00000559108 ALOXE3Q9BYJ1 711 aa10.19□□□□□ -0.78
TPM1-217ENST00000559108 CCDC134Q9H6E4 229 aa10.19□□□□□ -0.78
TPM1-217ENST00000559108 KCNK13Q9HB14 408 aa10.19□□□□□ -0.78
TPM1-217ENST00000559108 FGFR1OP2Q9NVK5 253 aa10.19□□□□□ -0.78
TPM1-217ENST00000559108 NMRK1Q9NWW6 199 aa10.19□□□□□ -0.78
TPM1-217ENST00000559108 POLHQ9Y253 713 aa10.19□□□□□ -0.78
TPM1-217ENST00000559108 MAN2B2Q9Y2E5 1009 aa10.19□□□□□ -0.78
TPM1-217ENST00000559108 ATRXP46100 2492 aa10.18□□□□□ -0.78
TPM1-217ENST00000559108 CACNA1BQ00975 2339 aa10.18□□□□□ -0.78
TPM1-217ENST00000559108 IGSF10Q6WRI0 2623 aa10.18□□□□□ -0.78
TPM1-217ENST00000559108 C9JVG2 144 aa10.18□□□□□ -0.78
TPM1-217ENST00000559108 AKAP10O43572 662 aa10.18□□□□□ -0.78
TPM1-217ENST00000559108 PRKNO60260 465 aaPredicted RBP10.18□□□□□ -0.78
TPM1-217ENST00000559108 NME6O75414 186 aaPredicted RBP10.18□□□□□ -0.78
TPM1-217ENST00000559108 SNUPNO95149 360 aaKnown RBP10.18□□□□□ -0.78
TPM1-217ENST00000559108 GPR75O95800 540 aa10.18□□□□□ -0.78
TPM1-217ENST00000559108 CD63P08962 238 aa10.18□□□□□ -0.78
TPM1-217ENST00000559108 ITGAMP11215 1152 aa10.18□□□□□ -0.78
TPM1-217ENST00000559108 EFNA1P20827 205 aaPredicted RBP10.18□□□□□ -0.78
TPM1-217ENST00000559108 ZFP36L2P47974 494 aaKnown RBP10.18□□□□□ -0.78
TPM1-217ENST00000559108 ALDH9A1P49189 494 aa10.18□□□□□ -0.78
TPM1-217ENST00000559108 ST13P50502 369 aaKnown RBP10.18□□□□□ -0.78
TPM1-217ENST00000559108 SLC26A5P58743 744 aa10.18□□□□□ -0.78
TPM1-217ENST00000559108 TRA2BP62995 288 aaKnown RBP10.18□□□□□ -0.78
TPM1-217ENST00000559108 EMX2Q04743 252 aa10.18□□□□□ -0.78
TPM1-217ENST00000559108 C2orf80Q0P641 193 aa10.18□□□□□ -0.78
TPM1-217ENST00000559108 PDE7AQ13946 482 aa10.18□□□□□ -0.78
TPM1-217ENST00000559108 ATP6AP1LQ52LC2 224 aa10.18□□□□□ -0.78
TPM1-217ENST00000559108 OR52E8Q6IFG1 317 aa10.18□□□□□ -0.78
TPM1-217ENST00000559108 OGFOD2Q6N063 350 aa10.18□□□□□ -0.78
TPM1-217ENST00000559108 TICAM1Q8IUC6 712 aa10.18□□□□□ -0.78
TPM1-217ENST00000559108 CRLF3Q8IUI8 442 aa10.18□□□□□ -0.78
TPM1-217ENST00000559108 RIMKLAQ8IXN7 391 aa10.18□□□□□ -0.78
TPM1-217ENST00000559108 PARP9Q8IXQ6 854 aa10.18□□□□□ -0.78
TPM1-217ENST00000559108 LRRC34Q8IZ02 419 aa10.18□□□□□ -0.78
TPM1-217ENST00000559108 EXD3Q8N9H8 876 aa10.18□□□□□ -0.78
TPM1-217ENST00000559108 FNDC5Q8NAU1 212 aa10.18□□□□□ -0.78
TPM1-217ENST00000559108 SUN3Q8TAQ9 357 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms