RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 EPS8L2Q9H6S3 715 aa12.91□□□□□ -0.34
TSPAN3-205ENST00000558745 ZNF395Q9H8N7 513 aaPredicted RBP12.91□□□□□ -0.34
TSPAN3-205ENST00000558745 BRF2Q9HAW0 419 aa12.91□□□□□ -0.34
TSPAN3-205ENST00000558745 KCNK9Q9NPC2 374 aa12.91□□□□□ -0.34
TSPAN3-205ENST00000558745 LYARQ9NX58 379 aaKnown RBP12.91□□□□□ -0.34
TSPAN3-205ENST00000558745 AHSPQ9NZD4 102 aa12.91□□□□□ -0.34
TSPAN3-205ENST00000558745 VPS29Q9UBQ0 182 aa12.91□□□□□ -0.34
TSPAN3-205ENST00000558745 VTI1BQ9UEU0 232 aa12.91□□□□□ -0.34
TSPAN3-205ENST00000558745 MID2Q9UJV3 735 aa12.91□□□□□ -0.34
TSPAN3-205ENST00000558745 ZNF223Q9UK11 482 aaPredicted RBP12.91□□□□□ -0.34
TSPAN3-205ENST00000558745 NBASA2RRP1 2371 aa12.9□□□□□ -0.34
TSPAN3-205ENST00000558745 C17orf105B2RV13 164 aa12.9□□□□□ -0.34
TSPAN3-205ENST00000558745 TMEM233B4DJY2 109 aa12.9□□□□□ -0.34
TSPAN3-205ENST00000558745 HRKO00198 91 aa12.9□□□□□ -0.34
TSPAN3-205ENST00000558745 KLHL41O60662 606 aa12.9□□□□□ -0.34
TSPAN3-205ENST00000558745 CRCPO75575 148 aa12.9□□□□□ -0.34
TSPAN3-205ENST00000558745 SORBS2O94875 1100 aaKnown RBP12.9□□□□□ -0.34
TSPAN3-205ENST00000558745 BPGMP07738 259 aa12.9□□□□□ -0.34
TSPAN3-205ENST00000558745 ARG2P78540 354 aa12.9□□□□□ -0.34
TSPAN3-205ENST00000558745 ARL13AQ5H913 290 aaPredicted RBP12.9□□□□□ -0.34
TSPAN3-205ENST00000558745 ACER2Q5QJU3 275 aa12.9□□□□□ -0.34
TSPAN3-205ENST00000558745 H3F3CQ6NXT2 135 aa12.9□□□□□ -0.34
TSPAN3-205ENST00000558745 FAM180BQ6P0A1 224 aa12.9□□□□□ -0.34
TSPAN3-205ENST00000558745 Q6ZS92 163 aa12.9□□□□□ -0.34
TSPAN3-205ENST00000558745 CISD2Q8N5K1 135 aaKnown RBP12.9□□□□□ -0.34
TSPAN3-205ENST00000558745 APCDD1LQ8NCL9 501 aa12.9□□□□□ -0.34
TSPAN3-205ENST00000558745 B3GNT7Q8NFL0 401 aa12.9□□□□□ -0.34
TSPAN3-205ENST00000558745 PNPLA2Q96AD5 504 aa12.9□□□□□ -0.34
TSPAN3-205ENST00000558745 EBPLQ9BY08 206 aa12.9□□□□□ -0.34
TSPAN3-205ENST00000558745 SLAMF7Q9NQ25 335 aa12.9□□□□□ -0.34
TSPAN3-205ENST00000558745 MS4A12Q9NXJ0 267 aa12.9□□□□□ -0.34
TSPAN3-205ENST00000558745 PHF11Q9UIL8 331 aa12.9□□□□□ -0.34
TSPAN3-205ENST00000558745 B3GNT3Q9Y2A9 372 aa12.9□□□□□ -0.34
TSPAN3-205ENST00000558745 STK38LQ9Y2H1 464 aa12.9□□□□□ -0.34
TSPAN3-205ENST00000558745 TRBV11-1A0A0K0K1C0 115 aa12.89□□□□□ -0.35
TSPAN3-205ENST00000558745 GPR75O95800 540 aa12.89□□□□□ -0.35
TSPAN3-205ENST00000558745 NR2F6P10588 404 aa12.89□□□□□ -0.35
TSPAN3-205ENST00000558745 TLX1P31314 330 aaPredicted RBP12.89□□□□□ -0.35
TSPAN3-205ENST00000558745 PTGER1P34995 402 aa12.89□□□□□ -0.35
TSPAN3-205ENST00000558745 BUD31P41223 144 aaPredicted RBP12.89□□□□□ -0.35
TSPAN3-205ENST00000558745 MAPK12P53778 367 aa12.89□□□□□ -0.35
TSPAN3-205ENST00000558745 CSTF3Q12996 717 aaKnown RBP12.89□□□□□ -0.35
TSPAN3-205ENST00000558745 ELAVL1Q15717 326 aaKnown RBP12.89□□□□□ -0.35
TSPAN3-205ENST00000558745 INPP5JQ15735 1006 aaPredicted RBP12.89□□□□□ -0.35
TSPAN3-205ENST00000558745 SPDYAQ5MJ70 313 aa12.89□□□□□ -0.35
TSPAN3-205ENST00000558745 C10orf62Q5T681 223 aaPredicted RBP12.89□□□□□ -0.35
TSPAN3-205ENST00000558745 NDUFAF5Q5TEU4 345 aa12.89□□□□□ -0.35
TSPAN3-205ENST00000558745 ZNF468Q5VIY5 522 aaPredicted RBP12.89□□□□□ -0.35
TSPAN3-205ENST00000558745 ABHD17BQ5VST6 288 aa12.89□□□□□ -0.35
TSPAN3-205ENST00000558745 PAGE2Q7Z2X7 111 aa12.89□□□□□ -0.35
TSPAN3-205ENST00000558745 RPS19BP1Q86WX3 136 aaKnown RBP12.89□□□□□ -0.35
TSPAN3-205ENST00000558745 OR1N1Q8NGS0 311 aa12.89□□□□□ -0.35
TSPAN3-205ENST00000558745 AGR3Q8TD06 166 aa12.89□□□□□ -0.35
TSPAN3-205ENST00000558745 TM9SF4Q92544 642 aa12.89□□□□□ -0.35
TSPAN3-205ENST00000558745 HAS2Q92819 552 aa12.89□□□□□ -0.35
TSPAN3-205ENST00000558745 TANKQ92844 425 aa12.89□□□□□ -0.35
TSPAN3-205ENST00000558745 ZNF354BQ96LW1 612 aa12.89□□□□□ -0.35
TSPAN3-205ENST00000558745 DEFB126Q9BYW3 111 aa12.89□□□□□ -0.35
TSPAN3-205ENST00000558745 OR8D2Q9GZM6 311 aa12.89□□□□□ -0.35
TSPAN3-205ENST00000558745 ILKAPQ9H0C8 392 aaPredicted RBP12.89□□□□□ -0.35
TSPAN3-205ENST00000558745 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.89□□□□□ -0.35
TSPAN3-205ENST00000558745 TUBB1Q9H4B7 451 aa12.89□□□□□ -0.35
TSPAN3-205ENST00000558745 ADAP2Q9NPF8 381 aa12.89□□□□□ -0.35
TSPAN3-205ENST00000558745 SENP1Q9P0U3 644 aa12.89□□□□□ -0.35
TSPAN3-205ENST00000558745 ADAM29Q9UKF5 820 aa12.89□□□□□ -0.35
TSPAN3-205ENST00000558745 CLCA3PQ9Y6N3 262 aa12.89□□□□□ -0.35
TSPAN3-205ENST00000558745 AZIN1O14977 448 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 LYPLA1O75608 230 aaPredicted RBP12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 DDAH2O95865 285 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 UROSP10746 265 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 HSD3B1P14060 373 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 HSD3B2P26439 372 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 STT3AP46977 705 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 SERPINB4P48594 390 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 CLCN2P51788 898 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 IGLV3-21P80748 117 aaPredicted RBP12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 CASP8Q14790 479 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 MEP1AQ16819 746 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 SPINK14Q6IE38 97 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 HPS6Q86YV9 775 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 NUDCD3Q8IVD9 361 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 TMEM132CQ8N3T6 1108 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 GBP7Q8N8V2 638 aaPredicted RBP12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 CPT1CQ8TCG5 803 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 SNRNP40Q96DI7 357 aaKnown RBP12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 PGM2Q96G03 612 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 DGAT2Q96PD7 388 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 HES7Q9BYE0 225 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 WDR41Q9HAD4 459 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 TMBIM4Q9HC24 238 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 NMRK1Q9NWW6 199 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 MAP10Q9P2G4 905 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 HEY2Q9UBP5 337 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 CES1P1Q9UKY3 287 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 NTNG1Q9Y2I2 539 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 POLR3HQ9Y535 204 aaPredicted RBP12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 PCDHA9Q9Y5H5 950 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 SERTM1A2A2V5 107 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 DYTNA2CJ06 578 aa12.88□□□□□ -0.35
TSPAN3-205ENST00000558745 BLACEA4D250 179 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms