RNA–Protein interactions for RNA: ENST00000557685.5

EFCAB11-213, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-213ENST00000557685 CSO75390 466 aaKnown RBP3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 CALCAP01258 141 aa3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 ALPPP05187 535 aa3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 PGK2P07205 417 aa3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 CCDC192P0DO97 292 aa3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 ALPPL2P10696 532 aa3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 DPEP1P16444 411 aa3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 GAP43P17677 238 aa3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 IL10P22301 178 aa3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 TNFRSF4P43489 277 aa3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 GEMP55040 296 aa3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 ERVK11-1P61568 191 aa3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 CDKL1Q00532 357 aa3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 GAMTQ14353 236 aa3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 PDK1Q15118 436 aa3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 TRADDQ15628 312 aa3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 KNOP1Q1ED39 458 aaKnown RBP3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 WSCD2Q2TBF2 565 aa3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 MS4A18Q3C1V0 323 aa3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 PARP10Q53GL7 1025 aa3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 TAF1BQ53T94 588 aaPredicted RBP3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 RTL6Q6ICC9 239 aa3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 ZNF730Q6ZMV8 503 aa3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 ZSCAN30Q86W11 494 aa3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 AQP11Q8NBQ7 271 aa3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 LEMD2Q8NC56 503 aa3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 OR52E1Q8NGJ3 308 aa3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 RAB39BQ96DA2 213 aa3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 PRICKLE1Q96MT3 831 aaPredicted RBP3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 TRIM51Q9BSJ1 452 aa3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 ZNF577Q9BSK1 485 aa3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 FUNDC2Q9BWH2 189 aa3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 XPO4Q9C0E2 1151 aaKnown RBP3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 PLEKHA3Q9HB20 300 aa3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 NMUR1Q9HB89 426 aa3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 HOMER3Q9NSC5 361 aa3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 NUDT4Q9NZJ9 180 aa3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 THAP10Q9P2Z0 257 aaPredicted RBP3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 FAM153AQ9UHL3 310 aa3.62□□□□□ -1.83
EFCAB11-213ENST00000557685 PTPRUQ92729 1446 aa3.61□□□□□ -1.83
EFCAB11-213ENST00000557685 ASB14A6NK59 587 aa3.61□□□□□ -1.83
EFCAB11-213ENST00000557685 SLC4A1P02730 911 aa3.61□□□□□ -1.83
EFCAB11-213ENST00000557685 CXCL10P02778 98 aa3.61□□□□□ -1.83
EFCAB11-213ENST00000557685 FHP07954 510 aa3.61□□□□□ -1.83
EFCAB11-213ENST00000557685 HIST1H2AGP0C0S8 130 aaPredicted RBP3.61□□□□□ -1.83
EFCAB11-213ENST00000557685 PCP11498 1178 aaKnown RBP3.61□□□□□ -1.83
EFCAB11-213ENST00000557685 ACP1P24666 158 aa3.61□□□□□ -1.83
EFCAB11-213ENST00000557685 MARCKSP29966 332 aaPredicted RBP3.61□□□□□ -1.83
EFCAB11-213ENST00000557685 PITPNBP48739 271 aa3.61□□□□□ -1.83
EFCAB11-213ENST00000557685 LIMK2P53671 638 aa3.61□□□□□ -1.83
EFCAB11-213ENST00000557685 ELAVL2Q12926 359 aaKnown RBP3.61□□□□□ -1.83
EFCAB11-213ENST00000557685 ZNF146Q15072 292 aa3.61□□□□□ -1.83
EFCAB11-213ENST00000557685 CCDC92Q53HC0 331 aaPredicted RBP3.61□□□□□ -1.83
EFCAB11-213ENST00000557685 C2CD6Q53TS8 623 aa3.61□□□□□ -1.83
EFCAB11-213ENST00000557685 NEPROQ6NW34 567 aa3.61□□□□□ -1.83
EFCAB11-213ENST00000557685 MFSD7Q6UXD7 560 aa3.61□□□□□ -1.83
EFCAB11-213ENST00000557685 CDHR3Q6ZTQ4 885 aa3.61□□□□□ -1.83
EFCAB11-213ENST00000557685 C1orf186Q6ZWK4 172 aa3.61□□□□□ -1.83
EFCAB11-213ENST00000557685 TAF8Q7Z7C8 310 aa3.61□□□□□ -1.83
EFCAB11-213ENST00000557685 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.61□□□□□ -1.83
EFCAB11-213ENST00000557685 WDR49Q8IV35 697 aa3.61□□□□□ -1.83
EFCAB11-213ENST00000557685 HDDC3Q8N4P3 179 aa3.61□□□□□ -1.83
EFCAB11-213ENST00000557685 MRPL43Q8N983 215 aaKnown RBP3.61□□□□□ -1.83
EFCAB11-213ENST00000557685 Q8NBF4 154 aa3.61□□□□□ -1.83
EFCAB11-213ENST00000557685 LRRC15Q8TF66 581 aa3.61□□□□□ -1.83
EFCAB11-213ENST00000557685 PCNPQ8WW12 178 aaKnown RBP3.61□□□□□ -1.83
EFCAB11-213ENST00000557685 HIST1H2ACQ93077 130 aa3.61□□□□□ -1.83
EFCAB11-213ENST00000557685 ESAMQ96AP7 390 aa3.61□□□□□ -1.83
EFCAB11-213ENST00000557685 RUNDC3BQ96NL0 473 aa3.61□□□□□ -1.83
EFCAB11-213ENST00000557685 CXXC4Q9H2H0 198 aa3.61□□□□□ -1.83
EFCAB11-213ENST00000557685 WDR41Q9HAD4 459 aa3.61□□□□□ -1.83
EFCAB11-213ENST00000557685 THYN1Q9P016 225 aa3.61□□□□□ -1.83
EFCAB11-213ENST00000557685 NDUFA13Q9P0J0 144 aa3.61□□□□□ -1.83
EFCAB11-213ENST00000557685 ERVK-18Q9QC07 812 aa3.61□□□□□ -1.83
EFCAB11-213ENST00000557685 NARFQ9UHQ1 456 aa3.61□□□□□ -1.83
EFCAB11-213ENST00000557685 ODF2LQ9ULJ1 636 aa3.61□□□□□ -1.83
EFCAB11-213ENST00000557685 SH3PXD2BA1X283 911 aa3.6□□□□□ -1.83
EFCAB11-213ENST00000557685 CFAP73A6NFT4 308 aa3.6□□□□□ -1.83
EFCAB11-213ENST00000557685 ARHGAP42A6NI28 874 aa3.6□□□□□ -1.83
EFCAB11-213ENST00000557685 ARHGEF33A8MVX0 844 aa3.6□□□□□ -1.83
EFCAB11-213ENST00000557685 TMCO5BA8MYB1 307 aa3.6□□□□□ -1.83
EFCAB11-213ENST00000557685 ARPC1BO15143 372 aaKnown RBP3.6□□□□□ -1.83
EFCAB11-213ENST00000557685 SNAP91O60641 907 aa3.6□□□□□ -1.83
EFCAB11-213ENST00000557685 ADORA3P0DMS8 318 aa3.6□□□□□ -1.83
EFCAB11-213ENST00000557685 PPP2R1AP30153 589 aa3.6□□□□□ -1.83
EFCAB11-213ENST00000557685 SFNP31947 248 aa3.6□□□□□ -1.83
EFCAB11-213ENST00000557685 ACADSBP45954 432 aa3.6□□□□□ -1.83
EFCAB11-213ENST00000557685 RPL27P61353 136 aaKnown RBP3.6□□□□□ -1.83
EFCAB11-213ENST00000557685 FKBP3Q00688 224 aaKnown RBP3.6□□□□□ -1.83
EFCAB11-213ENST00000557685 IL1RL1Q01638 556 aa3.6□□□□□ -1.83
EFCAB11-213ENST00000557685 SLC17A1Q14916 467 aa3.6□□□□□ -1.83
EFCAB11-213ENST00000557685 EXOSC7Q15024 291 aaKnown RBP3.6□□□□□ -1.83
EFCAB11-213ENST00000557685 P2RY14Q15391 338 aa3.6□□□□□ -1.83
EFCAB11-213ENST00000557685 CCDC40Q4G0X9 1142 aa3.6□□□□□ -1.83
EFCAB11-213ENST00000557685 C14orf177Q52M58 125 aa3.6□□□□□ -1.83
EFCAB11-213ENST00000557685 GPAT3Q53EU6 434 aa3.6□□□□□ -1.83
EFCAB11-213ENST00000557685 TOR1AIP1Q5JTV8 583 aa3.6□□□□□ -1.83
EFCAB11-213ENST00000557685 TEX35Q5T0J7 233 aa3.6□□□□□ -1.83
EFCAB11-213ENST00000557685 GSG1LQ6UXU4 331 aa3.6□□□□□ -1.83
EFCAB11-213ENST00000557685 ITIH5Q86UX2 942 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms