RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 OR10H3O60404 316 aa16.84■□□□□ 0.29
XRCC3-218ENST00000557439 NME6O75414 186 aaPredicted RBP16.84■□□□□ 0.29
XRCC3-218ENST00000557439 GPX5O75715 221 aa16.84■□□□□ 0.29
XRCC3-218ENST00000557439 PTX3P26022 381 aaPredicted RBP16.84■□□□□ 0.29
XRCC3-218ENST00000557439 NKX2-5P52952 324 aaPredicted RBP16.84■□□□□ 0.29
XRCC3-218ENST00000557439 TUBA1BP68363 451 aa16.84■□□□□ 0.29
XRCC3-218ENST00000557439 SYPL1Q16563 259 aa16.84■□□□□ 0.29
XRCC3-218ENST00000557439 SPDYE7PQ495Y7 208 aa16.84■□□□□ 0.29
XRCC3-218ENST00000557439 TUBA1AQ71U36 451 aa16.84■□□□□ 0.29
XRCC3-218ENST00000557439 C6orf120Q7Z4R8 191 aa16.84■□□□□ 0.29
XRCC3-218ENST00000557439 C11orf74Q86VG3 221 aa16.84■□□□□ 0.29
XRCC3-218ENST00000557439 AMER2Q8N7J2 671 aa16.84■□□□□ 0.29
XRCC3-218ENST00000557439 C12orf76Q8N812 135 aaPredicted RBP16.84■□□□□ 0.29
XRCC3-218ENST00000557439 APOBEC4Q8WW27 367 aaKnown RBP16.84■□□□□ 0.29
XRCC3-218ENST00000557439 TFGQ92734 400 aaPredicted RBP16.84■□□□□ 0.29
XRCC3-218ENST00000557439 MVB12BQ9H7P6 319 aa16.84■□□□□ 0.29
XRCC3-218ENST00000557439 LHX9Q9NQ69 397 aa16.84■□□□□ 0.29
XRCC3-218ENST00000557439 ANHXE9PGG2 379 aa16.83■□□□□ 0.28
XRCC3-218ENST00000557439 SCAMP1O15126 338 aa16.83■□□□□ 0.28
XRCC3-218ENST00000557439 PI15O43692 258 aa16.83■□□□□ 0.28
XRCC3-218ENST00000557439 ALOX5P09917 674 aa16.83■□□□□ 0.28
XRCC3-218ENST00000557439 CD72P21854 359 aa16.83■□□□□ 0.28
XRCC3-218ENST00000557439 SERPINB1P30740 379 aa16.83■□□□□ 0.28
XRCC3-218ENST00000557439 HMGA2P52926 109 aa16.83■□□□□ 0.28
XRCC3-218ENST00000557439 SFSWAPQ12872 951 aaKnown RBP16.83■□□□□ 0.28
XRCC3-218ENST00000557439 SELENBP1Q13228 472 aa16.83■□□□□ 0.28
XRCC3-218ENST00000557439 PIN1Q13526 163 aaPredicted RBP16.83■□□□□ 0.28
XRCC3-218ENST00000557439 OR2L2Q8NH16 312 aa16.83■□□□□ 0.28
XRCC3-218ENST00000557439 PDXPQ96GD0 296 aa16.83■□□□□ 0.28
XRCC3-218ENST00000557439 RAD9AQ99638 391 aa16.83■□□□□ 0.28
XRCC3-218ENST00000557439 YIPF4Q9BSR8 244 aa16.83■□□□□ 0.28
XRCC3-218ENST00000557439 RERGLQ9H628 205 aa16.83■□□□□ 0.28
XRCC3-218ENST00000557439 KCNK12Q9HB15 430 aa16.83■□□□□ 0.28
XRCC3-218ENST00000557439 M0R3H8 397 aa16.83■□□□□ 0.28
XRCC3-218ENST00000557439 CYP7B1O75881 506 aa16.83■□□□□ 0.28
XRCC3-218ENST00000557439 PCCBP05166 539 aa16.83■□□□□ 0.28
XRCC3-218ENST00000557439 DDCP20711 480 aa16.83■□□□□ 0.28
XRCC3-218ENST00000557439 BSGP35613 385 aa16.83■□□□□ 0.28
XRCC3-218ENST00000557439 UGT2B15P54855 530 aa16.83■□□□□ 0.28
XRCC3-218ENST00000557439 KHDRBS2Q5VWX1 349 aaKnown RBP16.83■□□□□ 0.28
XRCC3-218ENST00000557439 ATCAYQ86WG3 371 aa16.83■□□□□ 0.28
XRCC3-218ENST00000557439 TRMT61AQ96FX7 289 aaKnown RBP16.83■□□□□ 0.28
XRCC3-218ENST00000557439 CNPPD1Q9BV87 410 aa16.83■□□□□ 0.28
XRCC3-218ENST00000557439 ZCCHC2Q9C0B9 1178 aaKnown RBP16.83■□□□□ 0.28
XRCC3-218ENST00000557439 SIRT3Q9NTG7 399 aaPredicted RBP16.83■□□□□ 0.28
XRCC3-218ENST00000557439 ERVK13-1Q9NX77 482 aa16.83■□□□□ 0.28
XRCC3-218ENST00000557439 MARK1Q9P0L2 795 aa16.83■□□□□ 0.28
XRCC3-218ENST00000557439 REV1Q9UBZ9 1251 aa16.83■□□□□ 0.28
XRCC3-218ENST00000557439 MYO10Q9HD67 2058 aa16.82■□□□□ 0.28
XRCC3-218ENST00000557439 TLR4O00206 839 aa16.82■□□□□ 0.28
XRCC3-218ENST00000557439 LRRTM2O43300 516 aa16.82■□□□□ 0.28
XRCC3-218ENST00000557439 MFN2O95140 757 aa16.82■□□□□ 0.28
XRCC3-218ENST00000557439 APOL3O95236 402 aa16.82■□□□□ 0.28
XRCC3-218ENST00000557439 IFNA14P01570 189 aa16.82■□□□□ 0.28
XRCC3-218ENST00000557439 ELAVL4P26378 380 aaKnown RBP16.82■□□□□ 0.28
XRCC3-218ENST00000557439 CTNNB1P35222 781 aa16.82■□□□□ 0.28
XRCC3-218ENST00000557439 GJA8P48165 433 aa16.82■□□□□ 0.28
XRCC3-218ENST00000557439 LIMK1P53667 647 aa16.82■□□□□ 0.28
XRCC3-218ENST00000557439 MADCAM1Q13477 382 aa16.82■□□□□ 0.28
XRCC3-218ENST00000557439 C17orf64Q86WR6 236 aa16.82■□□□□ 0.28
XRCC3-218ENST00000557439 PAWRQ96IZ0 340 aaKnown RBP16.82■□□□□ 0.28
XRCC3-218ENST00000557439 LRIG1Q96JA1 1093 aa16.82■□□□□ 0.28
XRCC3-218ENST00000557439 PRR14Q9BWN1 585 aa16.82■□□□□ 0.28
XRCC3-218ENST00000557439 EPHX3Q9H6B9 360 aa16.82■□□□□ 0.28
XRCC3-218ENST00000557439 POU2F3Q9UKI9 436 aa16.82■□□□□ 0.28
XRCC3-218ENST00000557439 TRPM6Q9BX84 2022 aa16.82■□□□□ 0.28
XRCC3-218ENST00000557439 HMGN4O00479 90 aa16.82■□□□□ 0.28
XRCC3-218ENST00000557439 PDPK1O15530 556 aa16.82■□□□□ 0.28
XRCC3-218ENST00000557439 LCMT2O60294 686 aaKnown RBP16.82■□□□□ 0.28
XRCC3-218ENST00000557439 NTN1O95631 604 aa16.82■□□□□ 0.28
XRCC3-218ENST00000557439 PRNPP04156 253 aa16.82■□□□□ 0.28
XRCC3-218ENST00000557439 OR12D1P0DN82 309 aa16.82■□□□□ 0.28
XRCC3-218ENST00000557439 TNNI3P19429 210 aa16.82■□□□□ 0.28
XRCC3-218ENST00000557439 S100A5P33763 92 aa16.82■□□□□ 0.28
XRCC3-218ENST00000557439 SAXO2Q658L1 398 aa16.82■□□□□ 0.28
XRCC3-218ENST00000557439 DESI1Q6ICB0 168 aa16.82■□□□□ 0.28
XRCC3-218ENST00000557439 ADCK2Q7Z695 626 aa16.82■□□□□ 0.28
XRCC3-218ENST00000557439 SLC34A3Q8N130 599 aa16.82■□□□□ 0.28
XRCC3-218ENST00000557439 KBTBD8Q8NFY9 601 aa16.82■□□□□ 0.28
XRCC3-218ENST00000557439 ABHD8Q96I13 439 aa16.82■□□□□ 0.28
XRCC3-218ENST00000557439 SLC6A18Q96N87 628 aa16.82■□□□□ 0.28
XRCC3-218ENST00000557439 XKR8Q9H6D3 395 aa16.82■□□□□ 0.28
XRCC3-218ENST00000557439 CLN6Q9NWW5 311 aa16.82■□□□□ 0.28
XRCC3-218ENST00000557439 PNMA8CA0A1B0GUJ8 204 aa16.81■□□□□ 0.28
XRCC3-218ENST00000557439 TIMP1P01033 207 aa16.81■□□□□ 0.28
XRCC3-218ENST00000557439 SRPRAP08240 638 aaKnown RBP16.81■□□□□ 0.28
XRCC3-218ENST00000557439 HOXB3P14651 431 aaPredicted RBP16.81■□□□□ 0.28
XRCC3-218ENST00000557439 RPL3P39023 403 aaKnown RBP16.81■□□□□ 0.28
XRCC3-218ENST00000557439 ZNF750Q32MQ0 723 aa16.81■□□□□ 0.28
XRCC3-218ENST00000557439 PLAG1Q6DJT9 500 aa16.81■□□□□ 0.28
XRCC3-218ENST00000557439 TCEANCQ8N8B7 351 aa16.81■□□□□ 0.28
XRCC3-218ENST00000557439 XAGE5Q8WWM1 108 aa16.81■□□□□ 0.28
XRCC3-218ENST00000557439 RAD51AP1Q96B01 352 aa16.81■□□□□ 0.28
XRCC3-218ENST00000557439 NEURL3Q96EH8 262 aa16.81■□□□□ 0.28
XRCC3-218ENST00000557439 OPALINQ96PE5 141 aa16.81■□□□□ 0.28
XRCC3-218ENST00000557439 MS4A8Q9BY19 250 aa16.81■□□□□ 0.28
XRCC3-218ENST00000557439 SPATA7Q9P0W8 599 aa16.81■□□□□ 0.28
XRCC3-218ENST00000557439 MRPS23Q9Y3D9 190 aaKnown RBP16.81■□□□□ 0.28
XRCC3-218ENST00000557439 A0A1W2PS29 197 aa16.81■□□□□ 0.28
XRCC3-218ENST00000557439 PSMD11O00231 422 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms