RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 TMEM198Q66K66 360 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 HIST2H2AA3Q6FI13 130 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 ABHD17CQ6PCB6 329 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 SBSNQ6UWP8 590 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 SLCO4C1Q6ZQN7 724 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 ZNF662Q6ZS27 426 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 SYDE1Q6ZW31 735 aaPredicted RBP9.41□□□□□ -0.9
RDH11-210ENST00000557331 P3H2Q8IVL5 708 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 PPIL6Q8IXY8 311 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 TAGAPQ8N103 731 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 GRK7Q8WTQ7 553 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 CCT6BQ92526 530 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 UBE2E3Q969T4 207 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 DTNBP1Q96EV8 351 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 QRFPRQ96P65 431 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 EGFL8Q99944 293 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 DESI2Q9BSY9 194 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 CNPPD1Q9BV87 410 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 SPNS1Q9H2V7 528 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 ZNF395Q9H8N7 513 aaPredicted RBP9.41□□□□□ -0.9
RDH11-210ENST00000557331 NDRG3Q9UGV2 375 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 EIF3LQ9Y262 564 aaKnown RBP9.41□□□□□ -0.9
RDH11-210ENST00000557331 EML6Q6ZMW3 1958 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 C15orf38-AP3S2A0A0A6YYH1 394 aa9.4□□□□□ -0.9
RDH11-210ENST00000557331 OR6C76A6NM76 312 aa9.4□□□□□ -0.9
RDH11-210ENST00000557331 G3V3Y1 287 aa9.4□□□□□ -0.9
RDH11-210ENST00000557331 CLGNO14967 610 aa9.4□□□□□ -0.9
RDH11-210ENST00000557331 ERN1O75460 977 aaKnown RBP9.4□□□□□ -0.9
RDH11-210ENST00000557331 CELA3AP09093 270 aa9.4□□□□□ -0.9
RDH11-210ENST00000557331 SERPINB1P30740 379 aa9.4□□□□□ -0.9
RDH11-210ENST00000557331 HNRNPH1P31943 449 aaKnown RBP9.4□□□□□ -0.9
RDH11-210ENST00000557331 VPS41P49754 854 aa9.4□□□□□ -0.9
RDH11-210ENST00000557331 TMED10P49755 219 aaKnown RBP9.4□□□□□ -0.9
RDH11-210ENST00000557331 PLA2G16P53816 162 aa9.4□□□□□ -0.9
RDH11-210ENST00000557331 PPP2R2BQ00005 443 aa9.4□□□□□ -0.9
RDH11-210ENST00000557331 ASPHQ12797 758 aa9.4□□□□□ -0.9
RDH11-210ENST00000557331 RCAN2Q14206 197 aa9.4□□□□□ -0.9
RDH11-210ENST00000557331 TRIP13Q15645 432 aaPredicted RBP9.4□□□□□ -0.9
RDH11-210ENST00000557331 NHSL2Q5HYW2 709 aa9.4□□□□□ -0.9
RDH11-210ENST00000557331 ANKRD22Q5VYY1 191 aa9.4□□□□□ -0.9
RDH11-210ENST00000557331 C16orf47Q6ZP98 133 aaPredicted RBP9.4□□□□□ -0.9
RDH11-210ENST00000557331 CHSY3Q70JA7 882 aa9.4□□□□□ -0.9
RDH11-210ENST00000557331 SLC29A4Q7RTT9 530 aa9.4□□□□□ -0.9
RDH11-210ENST00000557331 PACS2Q86VP3 889 aa9.4□□□□□ -0.9
RDH11-210ENST00000557331 TMEM139Q8IV31 216 aa9.4□□□□□ -0.9
RDH11-210ENST00000557331 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.4□□□□□ -0.9
RDH11-210ENST00000557331 RASGEF1CQ8N431 466 aa9.4□□□□□ -0.9
RDH11-210ENST00000557331 FAM47BQ8NA70 645 aa9.4□□□□□ -0.9
RDH11-210ENST00000557331 RELL2Q8NC24 303 aaPredicted RBP9.4□□□□□ -0.9
RDH11-210ENST00000557331 TANKQ92844 425 aa9.4□□□□□ -0.9
RDH11-210ENST00000557331 SLCO2A1Q92959 643 aa9.4□□□□□ -0.9
RDH11-210ENST00000557331 MAGOHBQ96A72 148 aaKnown RBP9.4□□□□□ -0.9
RDH11-210ENST00000557331 SENP5Q96HI0 755 aaPredicted RBP9.4□□□□□ -0.9
RDH11-210ENST00000557331 FBXL20Q96IG2 436 aa9.4□□□□□ -0.9
RDH11-210ENST00000557331 VPS39Q96JC1 886 aa9.4□□□□□ -0.9
RDH11-210ENST00000557331 RUNDC3BQ96NL0 473 aa9.4□□□□□ -0.9
RDH11-210ENST00000557331 CENPKQ9BS16 269 aa9.4□□□□□ -0.9
RDH11-210ENST00000557331 DOHHQ9BU89 302 aa9.4□□□□□ -0.9
RDH11-210ENST00000557331 EFCAB11Q9BUY7 163 aa9.4□□□□□ -0.9
RDH11-210ENST00000557331 PRDM14Q9GZV8 571 aa9.4□□□□□ -0.9
RDH11-210ENST00000557331 LIN28AQ9H9Z2 209 aaKnown RBP9.4□□□□□ -0.9
RDH11-210ENST00000557331 JKAMPQ9P055 326 aa9.4□□□□□ -0.9
RDH11-210ENST00000557331 SPRR3Q9UBC9 169 aa9.4□□□□□ -0.9
RDH11-210ENST00000557331 OARD1Q9Y530 152 aa9.4□□□□□ -0.9
RDH11-210ENST00000557331 ZANQ9Y493 2812 aa9.4□□□□□ -0.91
RDH11-210ENST00000557331 IQANK1A0A1B0GTG1 560 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 MBD3L4A6NDZ8 208 aaPredicted RBP9.39□□□□□ -0.91
RDH11-210ENST00000557331 MBD3L3A6NE82 208 aaPredicted RBP9.39□□□□□ -0.91
RDH11-210ENST00000557331 MBD3L5A6NJ08 208 aaPredicted RBP9.39□□□□□ -0.91
RDH11-210ENST00000557331 GOLGA8MH3BSY2 632 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 TGFBR3LH3BV60 316 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 SMPD2O60906 423 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 IGKV3-11P04433 115 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 HPNP05981 417 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 FBXO45P0C2W1 286 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 BMP7P18075 431 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 CD53P19397 219 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 ENDOUP21128 410 aaKnown RBP9.39□□□□□ -0.91
RDH11-210ENST00000557331 FPR1P21462 350 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 GABRB3P28472 473 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 GALNSP34059 522 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 PIGAP37287 484 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 MSH2P43246 934 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 STT3AP46977 705 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 NR0B1P51843 470 aaKnown RBP9.39□□□□□ -0.91
RDH11-210ENST00000557331 ARFIP1P53367 373 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 IGLV3-21P80748 117 aaPredicted RBP9.39□□□□□ -0.91
RDH11-210ENST00000557331 PLIN5Q00G26 463 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 DUSP8Q13202 625 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 GAB1Q13480 694 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 FRG1Q14331 258 aaKnown RBP9.39□□□□□ -0.91
RDH11-210ENST00000557331 SLBPQ14493 270 aaKnown RBP eCLIP9.39□□□□□ -0.91
RDH11-210ENST00000557331 NTRK2Q16620 822 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 PPP1R3AQ16821 1122 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 AP5B1Q2VPB7 878 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 VASNQ6EMK4 673 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 SEM1Q6ZVN7 128 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 FRA10AC1Q70Z53 315 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 CLNKQ7Z7G1 428 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 NAT8LQ8N9F0 302 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms