RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 DRC3Q9H069 523 aa4.35□□□□□ -1.71
SCFD1-223ENST00000557076 LRTM1Q9HBL6 345 aa4.35□□□□□ -1.71
SCFD1-223ENST00000557076 AKIP1Q9NQ31 210 aa4.35□□□□□ -1.71
SCFD1-223ENST00000557076 ALKBH4Q9NXW9 302 aa4.35□□□□□ -1.71
SCFD1-223ENST00000557076 JKAMPQ9P055 326 aa4.35□□□□□ -1.71
SCFD1-223ENST00000557076 IP6K2Q9UHH9 426 aa4.35□□□□□ -1.71
SCFD1-223ENST00000557076 PLAGL1Q9UM63 463 aa4.35□□□□□ -1.71
SCFD1-223ENST00000557076 ARL5AQ9Y689 179 aa4.35□□□□□ -1.71
SCFD1-223ENST00000557076 A0A0A6YYC8 382 aaPredicted RBP4.34□□□□□ -1.71
SCFD1-223ENST00000557076 A0A0U1RQJ8 604 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 OR2W5A6NFC9 320 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 ZNF487B1APH4 448 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 I3L1I5 382 aaPredicted RBP4.34□□□□□ -1.71
SCFD1-223ENST00000557076 MYO1FO00160 1098 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 NRP2O60462 931 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 HCN1O60741 890 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 LY86O95711 162 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 EPPINO95925 133 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 TUBB4AP04350 444 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 RPN2P04844 631 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 PKMP14618 531 aaKnown RBP4.34□□□□□ -1.71
SCFD1-223ENST00000557076 FERP16591 822 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 ZNF37AP17032 561 aaPredicted RBP4.34□□□□□ -1.71
SCFD1-223ENST00000557076 TPH1P17752 444 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 PTPN3P26045 913 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 ARHGAP25P42331 645 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 PTH2RP49190 550 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 CLK3P49761 638 aaKnown RBP4.34□□□□□ -1.71
SCFD1-223ENST00000557076 KLK7P49862 253 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 CDKN1CP49918 316 aaPredicted RBP4.34□□□□□ -1.71
SCFD1-223ENST00000557076 SLC26A5P58743 744 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 DUSP2Q05923 314 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 CD69Q07108 199 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 FOXO1Q12778 655 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 MPP3Q13368 585 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 TNK1Q13470 666 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 TRIM14Q14142 442 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 NOMO1Q15155 1222 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 NDUFA9Q16795 377 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 SYT16Q17RD7 645 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 MINDY4Q4G0A6 757 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 SFT2D3Q587I9 215 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 PAPD4Q6PIY7 484 aaKnown RBP4.34□□□□□ -1.71
SCFD1-223ENST00000557076 SUSD1Q6UWL2 747 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 RANBP10Q6VN20 620 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 MDGA2Q7Z553 956 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 STRA8Q7Z7C7 330 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 CSNK1A1LQ8N752 337 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 PLD5Q8N7P1 536 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 NEK11Q8NG66 645 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 OR51Q1Q8NH59 317 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 CHAC2Q8WUX2 184 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 ELMO1Q92556 727 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 RNF157Q96PX1 679 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 OR2A5Q96R48 311 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 FCRL5Q96RD9 977 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 CCL19Q99731 98 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 CNPPD1Q9BV87 410 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 RAB11FIP5Q9BXF6 653 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 ATG10Q9H0Y0 220 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 FAM96AQ9H5X1 160 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 YAE1D1Q9NRH1 226 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 DEPPQ9NTK1 212 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 ZNF701Q9NV72 531 aaPredicted RBP4.34□□□□□ -1.71
SCFD1-223ENST00000557076 SYBUQ9NX95 663 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 SLC39A10Q9ULF5 831 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 EIF3LQ9Y262 564 aaKnown RBP4.34□□□□□ -1.71
SCFD1-223ENST00000557076 RUVBL1Q9Y265 456 aaKnown RBP4.34□□□□□ -1.71
SCFD1-223ENST00000557076 ZKSCAN5Q9Y2L8 839 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 CHST2Q9Y4C5 530 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 CPAMD8Q8IZJ3 1885 aa4.34□□□□□ -1.71
SCFD1-223ENST00000557076 NBEAL2Q6ZNJ1 2754 aa4.34□□□□□ -1.72
SCFD1-223ENST00000557076 ALPK2Q86TB3 2170 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 A0A0G2JK05 382 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 SERINC4A6NH21 518 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 A8MV72 311 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-223ENST00000557076 ARHGEF33A8MVX0 844 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 MAGEB17A8MXT2 336 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 H7C0S8 307 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 VPS26AO75436 327 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 GPC4O75487 556 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 NCR1O76036 304 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 NSA2O95478 260 aaKnown RBP4.33□□□□□ -1.72
SCFD1-223ENST00000557076 FTH1P02794 183 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 HKR1P10072 659 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 ZFXP17010 805 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-223ENST00000557076 CNR1P21554 472 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 KDELR1P24390 212 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 OPRM1P35372 400 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 XCR1P46094 333 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 NR2C2P49116 596 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 PCYT1AP49585 367 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 NRG3P56975 720 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 OR4D2P58180 307 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 MAT1AQ00266 395 aaKnown RBP4.33□□□□□ -1.72
SCFD1-223ENST00000557076 RHAGQ02094 409 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 PLGLB1Q02325 96 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 ABRAXAS2Q15018 415 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 BRD3Q15059 726 aa4.33□□□□□ -1.72
SCFD1-223ENST00000557076 SF3B4Q15427 424 aaKnown RBP eCLIP4.33□□□□□ -1.724e-7■■□□□ 13.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms