RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 G6PC3Q9BUM1 346 aa11.35□□□□□ -0.59
PSEN1-220ENST00000557037 KLHL4Q9C0H6 718 aa11.35□□□□□ -0.59
PSEN1-220ENST00000557037 SPNS1Q9H2V7 528 aa11.35□□□□□ -0.59
PSEN1-220ENST00000557037 CLCF1Q9UBD9 225 aa11.35□□□□□ -0.59
PSEN1-220ENST00000557037 DTX4Q9Y2E6 619 aa11.35□□□□□ -0.59
PSEN1-220ENST00000557037 CRYL1Q9Y2S2 319 aa11.35□□□□□ -0.59
PSEN1-220ENST00000557037 C15orf41Q9Y2V0 281 aa11.35□□□□□ -0.59
PSEN1-220ENST00000557037 TCAF1Q9Y4C2 921 aa11.35□□□□□ -0.59
PSEN1-220ENST00000557037 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.35□□□□□ -0.59
PSEN1-220ENST00000557037 MAGED1Q9Y5V3 778 aaPredicted RBP11.35□□□□□ -0.59
PSEN1-220ENST00000557037 CADP27708 2225 aa11.34□□□□□ -0.59
PSEN1-220ENST00000557037 TRBC2A0A5B9 178 aa11.34□□□□□ -0.59
PSEN1-220ENST00000557037 ZBTB14O43829 449 aa11.34□□□□□ -0.59
PSEN1-220ENST00000557037 ETHE1O95571 254 aa11.34□□□□□ -0.59
PSEN1-220ENST00000557037 TGM6O95932 706 aa11.34□□□□□ -0.59
PSEN1-220ENST00000557037 SMIM10L1P0DMW3 83 aa11.34□□□□□ -0.59
PSEN1-220ENST00000557037 IGHV4-31P0DP07 118 aa11.34□□□□□ -0.59
PSEN1-220ENST00000557037 RPL21P46778 160 aaKnown RBP11.34□□□□□ -0.59
PSEN1-220ENST00000557037 MASP1P48740 699 aa11.34□□□□□ -0.59
PSEN1-220ENST00000557037 PCYT1AP49585 367 aa11.34□□□□□ -0.59
PSEN1-220ENST00000557037 EEF1A1P68104 462 aaKnown RBP11.34□□□□□ -0.59
PSEN1-220ENST00000557037 SIRPAP78324 504 aa11.34□□□□□ -0.59
PSEN1-220ENST00000557037 NAE1Q13564 534 aa11.34□□□□□ -0.59
PSEN1-220ENST00000557037 TOR1AIP1Q5JTV8 583 aa11.34□□□□□ -0.59
PSEN1-220ENST00000557037 EEF1A1P5Q5VTE0 462 aa11.34□□□□□ -0.59
PSEN1-220ENST00000557037 PPP1R21Q6ZMI0 780 aa11.34□□□□□ -0.59
PSEN1-220ENST00000557037 ADGRE4PQ86SQ3 457 aa11.34□□□□□ -0.59
PSEN1-220ENST00000557037 LINC00523Q86TU6 105 aa11.34□□□□□ -0.59
PSEN1-220ENST00000557037 WFDC8Q8IUA0 241 aa11.34□□□□□ -0.59
PSEN1-220ENST00000557037 DEPDC4Q8N2C3 294 aa11.34□□□□□ -0.59
PSEN1-220ENST00000557037 LPGAT1Q92604 370 aa11.34□□□□□ -0.59
PSEN1-220ENST00000557037 PYCR2Q96C36 320 aa11.34□□□□□ -0.59
PSEN1-220ENST00000557037 SMIM10Q96HG1 83 aa11.34□□□□□ -0.59
PSEN1-220ENST00000557037 ALOXE3Q9BYJ1 711 aa11.34□□□□□ -0.59
PSEN1-220ENST00000557037 PHACTR1Q9C0D0 580 aa11.34□□□□□ -0.59
PSEN1-220ENST00000557037 AICDAQ9GZX7 198 aa11.34□□□□□ -0.59
PSEN1-220ENST00000557037 ELOVL5Q9NYP7 299 aa11.34□□□□□ -0.59
PSEN1-220ENST00000557037 AMFRQ9UKV5 643 aa11.34□□□□□ -0.59
PSEN1-220ENST00000557037 VWFP04275 2813 aa11.33□□□□□ -0.6
PSEN1-220ENST00000557037 FRG2CA6NGY1 282 aa11.33□□□□□ -0.6
PSEN1-220ENST00000557037 E5RI56 91 aa11.33□□□□□ -0.6
PSEN1-220ENST00000557037 PSMD3O43242 534 aa11.33□□□□□ -0.6
PSEN1-220ENST00000557037 FBXO45P0C2W1 286 aa11.33□□□□□ -0.6
PSEN1-220ENST00000557037 CPN1P15169 458 aa11.33□□□□□ -0.6
PSEN1-220ENST00000557037 NPPBP16860 134 aa11.33□□□□□ -0.6
PSEN1-220ENST00000557037 SAT1P21673 171 aa11.33□□□□□ -0.6
PSEN1-220ENST00000557037 TBXA2RP21731 343 aa11.33□□□□□ -0.6
PSEN1-220ENST00000557037 MSH2P43246 934 aa11.33□□□□□ -0.6
PSEN1-220ENST00000557037 ID2Q02363 134 aa11.33□□□□□ -0.6
PSEN1-220ENST00000557037 LOXL1Q08397 574 aaPredicted RBP11.33□□□□□ -0.6
PSEN1-220ENST00000557037 SQLEQ14534 574 aa11.33□□□□□ -0.6
PSEN1-220ENST00000557037 FNDC7Q5VTL7 733 aa11.33□□□□□ -0.6
PSEN1-220ENST00000557037 ALKBH2Q6NS38 261 aa11.33□□□□□ -0.6
PSEN1-220ENST00000557037 AGTRAPQ6RW13 159 aa11.33□□□□□ -0.6
PSEN1-220ENST00000557037 TMEM64Q6YI46 380 aa11.33□□□□□ -0.6
PSEN1-220ENST00000557037 UBE2R2Q712K3 238 aaPredicted RBP11.33□□□□□ -0.6
PSEN1-220ENST00000557037 C9orf40Q8IXQ3 194 aa11.33□□□□□ -0.6
PSEN1-220ENST00000557037 FAM83FQ8NEG4 500 aaPredicted RBP11.33□□□□□ -0.6
PSEN1-220ENST00000557037 RAB3IL1Q8TBN0 382 aa11.33□□□□□ -0.6
PSEN1-220ENST00000557037 ZNF721Q8TF20 911 aa11.33□□□□□ -0.6
PSEN1-220ENST00000557037 NEUROG1Q92886 237 aa11.33□□□□□ -0.6
PSEN1-220ENST00000557037 RILPQ96NA2 401 aa11.33□□□□□ -0.6
PSEN1-220ENST00000557037 CSF3RQ99062 836 aa11.33□□□□□ -0.6
PSEN1-220ENST00000557037 TMEM204Q9BSN7 226 aa11.33□□□□□ -0.6
PSEN1-220ENST00000557037 CHRAC1Q9NRG0 131 aa11.33□□□□□ -0.6
PSEN1-220ENST00000557037 COPS7AQ9UBW8 275 aa11.33□□□□□ -0.6
PSEN1-220ENST00000557037 VTI1BQ9UEU0 232 aa11.33□□□□□ -0.6
PSEN1-220ENST00000557037 ZFP69BQ9UJL9 534 aa11.33□□□□□ -0.6
PSEN1-220ENST00000557037 INTUQ9ULD6 942 aa11.33□□□□□ -0.6
PSEN1-220ENST00000557037 KCNS2Q9ULS6 477 aa11.33□□□□□ -0.6
PSEN1-220ENST00000557037 GOLGA8KD6RF30 607 aa11.32□□□□□ -0.6
PSEN1-220ENST00000557037 H3BMM5 538 aa11.32□□□□□ -0.6
PSEN1-220ENST00000557037 GOLGA8TH3BQL2 631 aa11.32□□□□□ -0.6
PSEN1-220ENST00000557037 KIAA0513O60268 411 aa11.32□□□□□ -0.6
PSEN1-220ENST00000557037 ACTL6AO96019 429 aa11.32□□□□□ -0.6
PSEN1-220ENST00000557037 THBS1P07996 1170 aa11.32□□□□□ -0.6
PSEN1-220ENST00000557037 DANCRP0C864 163 aa11.32□□□□□ -0.6
PSEN1-220ENST00000557037 CREB1P16220 341 aa11.32□□□□□ -0.6
PSEN1-220ENST00000557037 SERPINB3P29508 390 aa11.32□□□□□ -0.6
PSEN1-220ENST00000557037 RPL22P35268 128 aaKnown RBP11.32□□□□□ -0.6
PSEN1-220ENST00000557037 SCTRP47872 440 aa11.32□□□□□ -0.6
PSEN1-220ENST00000557037 STARP49675 285 aa11.32□□□□□ -0.6
PSEN1-220ENST00000557037 RAB38P57729 211 aa11.32□□□□□ -0.6
PSEN1-220ENST00000557037 ZBED6P86452 979 aa11.32□□□□□ -0.6
PSEN1-220ENST00000557037 STX4Q12846 297 aa11.32□□□□□ -0.6
PSEN1-220ENST00000557037 SLC18A3Q16572 532 aa11.32□□□□□ -0.6
PSEN1-220ENST00000557037 EXOC3L2Q2M3D2 409 aa11.32□□□□□ -0.6
PSEN1-220ENST00000557037 LCTLQ6UWM7 567 aa11.32□□□□□ -0.6
PSEN1-220ENST00000557037 PIWIL4Q7Z3Z4 852 aaKnown RBP11.32□□□□□ -0.6
PSEN1-220ENST00000557037 P4HA3Q7Z4N8 544 aa11.32□□□□□ -0.6
PSEN1-220ENST00000557037 RHOT2Q8IXI1 618 aa11.32□□□□□ -0.6
PSEN1-220ENST00000557037 ZNF595Q8IYB9 648 aa11.32□□□□□ -0.6
PSEN1-220ENST00000557037 MPP5Q8N3R9 675 aa11.32□□□□□ -0.6
PSEN1-220ENST00000557037 TBC1D19Q8N5T2 526 aa11.32□□□□□ -0.6
PSEN1-220ENST00000557037 RFLNBQ8N5W9 214 aa11.32□□□□□ -0.6
PSEN1-220ENST00000557037 ZNF610Q8N9Z0 462 aa11.32□□□□□ -0.6
PSEN1-220ENST00000557037 ABHD11Q8NFV4 315 aa11.32□□□□□ -0.6
PSEN1-220ENST00000557037 OR4K1Q8NGD4 311 aa11.32□□□□□ -0.6
PSEN1-220ENST00000557037 LILRB1Q8NHL6 650 aaPredicted RBP11.32□□□□□ -0.6
PSEN1-220ENST00000557037 GIMAP7Q8NHV1 300 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms