RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 SMIM29Q86T20 159 aa4.73□□□□□ -1.65
HIF1A-209ENST00000556827 IQCHQ86VS3 1027 aa4.73□□□□□ -1.65
HIF1A-209ENST00000556827 LGI2Q8N0V4 545 aa4.73□□□□□ -1.65
HIF1A-209ENST00000556827 STK40Q8N2I9 435 aa4.73□□□□□ -1.65
HIF1A-209ENST00000556827 GBGT1Q8N5D6 347 aa4.73□□□□□ -1.65
HIF1A-209ENST00000556827 ATP6V0D2Q8N8Y2 350 aa4.73□□□□□ -1.65
HIF1A-209ENST00000556827 C1orf131Q8NDD1 294 aaKnown RBP4.73□□□□□ -1.65
HIF1A-209ENST00000556827 KCNE4Q8WWG9 221 aa4.73□□□□□ -1.65
HIF1A-209ENST00000556827 NDRG1Q92597 394 aaKnown RBP4.73□□□□□ -1.65
HIF1A-209ENST00000556827 WBP1Q96G27 269 aa4.73□□□□□ -1.65
HIF1A-209ENST00000556827 FEM1CQ96JP0 617 aa4.73□□□□□ -1.65
HIF1A-209ENST00000556827 BTN2A3PQ96KV6 586 aa4.73□□□□□ -1.65
HIF1A-209ENST00000556827 HSFY1Q96LI6 401 aa4.73□□□□□ -1.65
HIF1A-209ENST00000556827 ZNF578Q96N58 590 aaPredicted RBP4.73□□□□□ -1.65
HIF1A-209ENST00000556827 SPAG5Q96R06 1193 aa4.73□□□□□ -1.65
HIF1A-209ENST00000556827 NEURL2Q9BR09 285 aa4.73□□□□□ -1.65
HIF1A-209ENST00000556827 MAK16Q9BXY0 300 aaKnown RBP4.73□□□□□ -1.65
HIF1A-209ENST00000556827 MIS12Q9H081 205 aa4.73□□□□□ -1.65
HIF1A-209ENST00000556827 SEMA6AQ9H2E6 1030 aa4.73□□□□□ -1.65
HIF1A-209ENST00000556827 HRH4Q9H3N8 390 aa4.73□□□□□ -1.65
HIF1A-209ENST00000556827 ABCF3Q9NUQ8 709 aa4.73□□□□□ -1.65
HIF1A-209ENST00000556827 MARCH4Q9P2E8 410 aaPredicted RBP4.73□□□□□ -1.65
HIF1A-209ENST00000556827 ARMCX3Q9UH62 379 aaPredicted RBP4.73□□□□□ -1.65
HIF1A-209ENST00000556827 HOOK1Q9UJC3 728 aaKnown RBP4.73□□□□□ -1.65
HIF1A-209ENST00000556827 SCN1AP35498 2009 aa4.73□□□□□ -1.65
HIF1A-209ENST00000556827 CEP295Q9C0D2 2601 aa4.73□□□□□ -1.65
HIF1A-209ENST00000556827 THADAQ6YHU6 1953 aa4.73□□□□□ -1.65
HIF1A-209ENST00000556827 ZFHX4Q86UP3 3567 aa4.73□□□□□ -1.65
HIF1A-209ENST00000556827 CTAGE9A4FU28 777 aa4.72□□□□□ -1.65
HIF1A-209ENST00000556827 CDRT15L2A8MXV6 281 aa4.72□□□□□ -1.65
HIF1A-209ENST00000556827 O00370 1275 aa4.72□□□□□ -1.65
HIF1A-209ENST00000556827 ALOX15BO15296 676 aa4.72□□□□□ -1.65
HIF1A-209ENST00000556827 LATO43561 262 aa4.72□□□□□ -1.65
HIF1A-209ENST00000556827 MITFO75030 526 aaPredicted RBP4.72□□□□□ -1.65
HIF1A-209ENST00000556827 RTN2O75298 545 aa4.72□□□□□ -1.65
HIF1A-209ENST00000556827 RSL1D1O76021 490 aaKnown RBP4.72□□□□□ -1.65
HIF1A-209ENST00000556827 IGLV3-27P01718 113 aa4.72□□□□□ -1.65
HIF1A-209ENST00000556827 CTAGE8P0CG41 777 aa4.72□□□□□ -1.65
HIF1A-209ENST00000556827 SELLP14151 372 aa4.72□□□□□ -1.65
HIF1A-209ENST00000556827 ACP1P24666 158 aa4.72□□□□□ -1.65
HIF1A-209ENST00000556827 NMBRP28336 390 aa4.72□□□□□ -1.65
HIF1A-209ENST00000556827 CCR1P32246 355 aa4.72□□□□□ -1.65
HIF1A-209ENST00000556827 SLC15A1P46059 708 aa4.72□□□□□ -1.65
HIF1A-209ENST00000556827 ARCN1P48444 511 aaKnown RBP4.72□□□□□ -1.65
HIF1A-209ENST00000556827 SGSHP51688 502 aa4.72□□□□□ -1.65
HIF1A-209ENST00000556827 CLNS1AP54105 237 aaKnown RBP4.72□□□□□ -1.65
HIF1A-209ENST00000556827 HILS1P60008 231 aa4.72□□□□□ -1.65
HIF1A-209ENST00000556827 ERVPABLB-1P60509 514 aa4.72□□□□□ -1.65
HIF1A-209ENST00000556827 KRT83P78385 493 aa4.72□□□□□ -1.65
HIF1A-209ENST00000556827 CHAF1BQ13112 559 aa4.72□□□□□ -1.65
HIF1A-209ENST00000556827 AIMP2Q13155 320 aaKnown RBP4.72□□□□□ -1.65
HIF1A-209ENST00000556827 CCDC40Q4G0X9 1142 aa4.72□□□□□ -1.65
HIF1A-209ENST00000556827 MS4A13Q5J8X5 152 aa4.72□□□□□ -1.65
HIF1A-209ENST00000556827 SIRPB2Q5JXA9 342 aa4.72□□□□□ -1.65
HIF1A-209ENST00000556827 NEK5Q6P3R8 708 aa4.72□□□□□ -1.65
HIF1A-209ENST00000556827 ZNF704Q6ZNC4 412 aaPredicted RBP4.72□□□□□ -1.65
HIF1A-209ENST00000556827 TRIM69Q86WT6 500 aa4.72□□□□□ -1.65
HIF1A-209ENST00000556827 GALNT13Q8IUC8 556 aa4.72□□□□□ -1.65
HIF1A-209ENST00000556827 CTAGE4Q8IX94 777 aa4.72□□□□□ -1.65
HIF1A-209ENST00000556827 GCSAMQ8N6F7 178 aa4.72□□□□□ -1.65
HIF1A-209ENST00000556827 LMNTD1Q8N9Z9 388 aa4.72□□□□□ -1.65
HIF1A-209ENST00000556827 TMEM255BQ8WV15 326 aa4.72□□□□□ -1.65
HIF1A-209ENST00000556827 SEMA4DQ92854 862 aa4.72□□□□□ -1.65
HIF1A-209ENST00000556827 OXNAD1Q96HP4 312 aaPredicted RBP4.72□□□□□ -1.65
HIF1A-209ENST00000556827 PPP1R16AQ96I34 528 aa4.72□□□□□ -1.65
HIF1A-209ENST00000556827 HGH1Q9BTY7 390 aa4.72□□□□□ -1.65
HIF1A-209ENST00000556827 CALN1Q9BXU9 219 aa4.72□□□□□ -1.65
HIF1A-209ENST00000556827 MBNL1Q9NR56 388 aaKnown RBP4.72□□□□□ -1.65
HIF1A-209ENST00000556827 CYTH4Q9UIA0 394 aa4.72□□□□□ -1.65
HIF1A-209ENST00000556827 TMEM184BQ9Y519 407 aaPredicted RBP4.72□□□□□ -1.65
HIF1A-209ENST00000556827 SLCO1B1Q9Y6L6 691 aa4.72□□□□□ -1.65
HIF1A-209ENST00000556827 CACNA1GO43497 2377 aa4.72□□□□□ -1.65
HIF1A-209ENST00000556827 FAM208BQ5VWN6 2430 aa4.72□□□□□ -1.65
HIF1A-209ENST00000556827 ATRXP46100 2492 aa4.71□□□□□ -1.65
HIF1A-209ENST00000556827 MYH11P35749 1972 aa4.71□□□□□ -1.66
HIF1A-209ENST00000556827 CFAP47Q6ZTR5 3102 aa4.71□□□□□ -1.66
HIF1A-209ENST00000556827 SDK1Q7Z5N4 2213 aa4.71□□□□□ -1.66
HIF1A-209ENST00000556827 KPNA3O00505 521 aaPredicted RBP4.71□□□□□ -1.66
HIF1A-209ENST00000556827 PSMA7O14818 248 aa4.71□□□□□ -1.66
HIF1A-209ENST00000556827 MCF2LO15068 1137 aa4.71□□□□□ -1.66
HIF1A-209ENST00000556827 SLC31A1O15431 190 aa4.71□□□□□ -1.66
HIF1A-209ENST00000556827 AHCYL1O43865 530 aa4.71□□□□□ -1.66
HIF1A-209ENST00000556827 LMX1BO60663 402 aa4.71□□□□□ -1.66
HIF1A-209ENST00000556827 SDC3O75056 442 aa4.71□□□□□ -1.66
HIF1A-209ENST00000556827 CSO75390 466 aaKnown RBP4.71□□□□□ -1.66
HIF1A-209ENST00000556827 CRYAAP02489 173 aa4.71□□□□□ -1.66
HIF1A-209ENST00000556827 GP1BAP07359 652 aa4.71□□□□□ -1.66
HIF1A-209ENST00000556827 THEGLP0DJG4 465 aa4.71□□□□□ -1.66
HIF1A-209ENST00000556827 KRT5P13647 590 aa4.71□□□□□ -1.66
HIF1A-209ENST00000556827 PDGFRAP16234 1089 aa4.71□□□□□ -1.66
HIF1A-209ENST00000556827 HNRNPA2B1P22626 353 aaKnown RBP4.71□□□□□ -1.66
HIF1A-209ENST00000556827 PPP1R2P41236 205 aa4.71□□□□□ -1.66
HIF1A-209ENST00000556827 CASP2P42575 452 aa4.71□□□□□ -1.66
HIF1A-209ENST00000556827 CLDN6P56747 220 aa4.71□□□□□ -1.66
HIF1A-209ENST00000556827 HNRNPKP61978 463 aaKnown RBP eCLIP4.71□□□□□ -1.66
HIF1A-209ENST00000556827 EEF1A1P68104 462 aaKnown RBP4.71□□□□□ -1.66
HIF1A-209ENST00000556827 RPL24P83731 157 aaKnown RBP4.71□□□□□ -1.66
HIF1A-209ENST00000556827 LRRC63Q05C16 580 aa4.71□□□□□ -1.66
HIF1A-209ENST00000556827 SGCGQ13326 291 aa4.71□□□□□ -1.66
HIF1A-209ENST00000556827 RBBP5Q15291 538 aaKnown RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms