RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 DNAJC22Q8N4W6 341 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 ING5Q8WYH8 240 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 DPF3Q92784 378 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 GLYATL1Q969I3 302 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 TMEM19Q96HH6 336 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 FKBP7Q9Y680 259 aa14.38□□□□□ -0.11
ARHGEF40-207ENST00000556399 TRBV23OR9-2A0A075B6M9 112 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 GABRR3A8MPY1 467 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 SCAMP1O15126 338 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 CACNG3O60359 315 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 SLC16A8O95907 504 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 SPINT3P49223 89 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 GBX2P52951 348 aaPredicted RBP14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 RPA4Q13156 261 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 JAZF1Q86VZ6 243 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 IFNL1Q8IU54 200 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 Q8N9G6 341 aaPredicted RBP14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 FATE1Q969F0 183 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 SCRN2Q96FV2 425 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 RTP3Q9BQQ7 232 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 SLA2Q9H6Q3 261 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 PCDHGB1Q9Y5G3 927 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 PCP4L1A6NKN8 68 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 ANHXE9PGG2 379 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 ZNF821O75541 412 aaPredicted RBP14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 SLC35G6P0C7Q6 338 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 CTNNB1P35222 781 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 ZNF81P51508 661 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 LDLRAD1Q5T700 205 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 ANKRD34AQ69YU3 496 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 PAMR1Q6UXH9 720 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 LYSMD2Q8IV50 215 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 OR7G3Q8NG95 312 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 C16orf78Q8WTQ4 265 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 CIDECQ96AQ7 238 aaPredicted RBP14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 SIPA1Q96FS4 1042 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 SECISBP2Q96T21 854 aaKnown RBP14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 CD8B2A6NJW9 211 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 CHURC1-FNTBB4DL54 471 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 LEFTY1O75610 366 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 ADORA3P0DMS8 318 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 CD8BP10966 210 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 ACVR2AP27037 513 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 GJA5P36382 358 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 WASP42768 502 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 TRAM1L1Q8N609 369 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 KLHDC9Q8NEP7 349 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 STOX2Q9P2F5 926 aaPredicted RBP14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 A0A1W2PQ09 198 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 A0A1W2PRG6 482 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 EEF1E1O43324 174 aaKnown RBP14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 SMAD6O43541 496 aaKnown RBP14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 ZNF33BQ06732 778 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 RPS26P11Q5JNZ5 115 aaPredicted RBP14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 SLC35F1Q5T1Q4 408 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 MANEALQ5VSG8 457 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 ADGRD2Q7Z7M1 963 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 DEDD2Q8WXF8 326 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 ZSCAN32Q9NX65 697 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 RDH8Q9NYR8 311 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 PSORS1C1Q9UIG5 152 aa14.37□□□□□ -0.11
ARHGEF40-207ENST00000556399 LRRC72A6NJI9 287 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 ALPPL2P10696 532 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 SSTR4P31391 388 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 CCR7P32248 378 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 CLCNKAP51800 687 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 CLLU1OSQ5K130 101 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 NRARPQ7Z6K4 114 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 ENTHD1Q8IYW4 607 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 OR56A1Q8NGH5 318 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 LILRB4Q8NHJ6 448 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 LKAAEAR1Q8TD35 194 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 ABCG5Q9H222 651 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 C12orf4Q9NQ89 552 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 ZSCAN5BA6NJL1 495 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 GTPBP1O00178 669 aaKnown RBP14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 LEFTY2O00292 366 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 PDCD5O14737 125 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 UGDHO60701 494 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 CBARPQ8N350 705 aaPredicted RBP14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 OR6K6Q8NGW6 343 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 C1orf216Q8TAB5 229 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 BBS10Q8TAM1 723 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 UBE2FQ969M7 185 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 P2RY13Q9BPV8 354 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 C17orf62Q9BQA9 187 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 TCF7L1Q9HCS4 588 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 SRRDQ9UH36 339 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 FBXO10Q9UK96 956 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 POLR1DQ9Y2S0 133 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 H7BY64 318 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 I6L893 689 aaPredicted RBP14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 RTCAO00442 366 aaKnown RBP14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 RNASET2O00584 256 aaKnown RBP14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 PLD2O14939 933 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 NDUFS4O43181 175 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 GPR37L1O60883 481 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 ZNF3P17036 446 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 LIPAP38571 399 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 SLC30A6Q6NXT4 461 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms