RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 LRRC74AQ0VAA2 488 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 ABRQ12979 859 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 CSTF3Q12996 717 aaKnown RBP4.22□□□□□ -1.73
ATXN3-241ENST00000556374 TRAF3Q13114 568 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 GPR17Q13304 367 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 SP140Q13342 867 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 ITGADQ13349 1161 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 KRR1Q13601 381 aaKnown RBP4.22□□□□□ -1.73
ATXN3-241ENST00000556374 KEAP1Q14145 624 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 ARHGEF7Q14155 803 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 PGS1Q32NB8 556 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 C5orf22Q49AR2 442 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 GPR33Q49SQ1 333 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 SYTL3Q4VX76 610 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 CCDC92Q53HC0 331 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-241ENST00000556374 SGO1Q5FBB7 561 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 FBXO48Q5FWF7 155 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 CDKL4Q5MAI5 379 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 SPANXN4Q5MJ08 99 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 C6orf141Q5SZD1 244 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 ZDHHC20Q5W0Z9 365 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 EGFLAMQ63HQ2 1017 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 METRNLQ641Q3 311 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 NADSYN1Q6IA69 706 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 FUT10Q6P4F1 479 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 SHQ1Q6PI26 577 aaKnown RBP4.22□□□□□ -1.73
ATXN3-241ENST00000556374 NCEH1Q6PIU2 408 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 FAM151BQ6UXP7 276 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 GCNT7Q6ZNI0 430 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 LINC00299Q6ZSB3 139 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 USP45Q70EL2 814 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 SNX20Q7Z614 316 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 GPR149Q86SP6 731 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 ITIH5Q86UX2 942 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 SERPINA9Q86WD7 417 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 ANKRD13BQ86YJ7 626 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 SYT12Q8IV01 421 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 DENND1CQ8IV53 801 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 P3H2Q8IVL5 708 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 RIMKLAQ8IXN7 391 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 SPARTQ8N0X7 666 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 DCBLD1Q8N8Z6 715 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 DCAF4L2Q8NA75 395 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 ATG16L2Q8NAA4 619 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 ATAD1Q8NBU5 361 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 CPEB3Q8NE35 698 aaKnown RBP4.22□□□□□ -1.73
ATXN3-241ENST00000556374 CHDHQ8NE62 594 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-241ENST00000556374 VPS37AQ8NEZ2 397 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 KBTBD8Q8NFY9 601 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 PJA1Q8NG27 643 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 OR10A6Q8NH74 314 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 CDC26Q8NHZ8 85 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 FAM110BQ8TC76 370 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 MCOLN3Q8TDD5 553 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 NTN5Q8WTR8 489 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-241ENST00000556374 IPCEF1Q8WWN9 437 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-241ENST00000556374 SELENOMQ8WWX9 145 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 SNX19Q92543 992 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 ZNF566Q969W8 418 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 ISG20Q96AZ6 181 aaKnown RBP4.22□□□□□ -1.73
ATXN3-241ENST00000556374 TAMM41Q96BW9 452 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 PYURFQ96I23 114 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 REXO5Q96IC2 774 aaKnown RBP4.22□□□□□ -1.73
ATXN3-241ENST00000556374 BOD1Q96IK1 185 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 RIPOR3Q96MK2 946 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 ZNF347Q96SE7 839 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 MBOAT4Q96T53 435 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 C19orf43Q9BQ61 176 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 TBCDQ9BTW9 1192 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 CIPCQ9C0C6 399 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 REXO4Q9GZR2 422 aaKnown RBP4.22□□□□□ -1.73
ATXN3-241ENST00000556374 LHPPQ9H008 270 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 GABARAPL1Q9H0R8 117 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 P2RY12Q9H244 342 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 CLMPQ9H6B4 373 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 ASB8Q9H765 288 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 ATP13A3Q9H7F0 1226 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 KAT8Q9H7Z6 458 aaKnown RBP4.22□□□□□ -1.73
ATXN3-241ENST00000556374 REEP1Q9H902 201 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 ZNF556Q9HAH1 456 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 BCO1Q9HAY6 547 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 TM9SF3Q9HD45 589 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 BPIFA1Q9NP55 256 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 NECTIN3Q9NQS3 549 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 KRT84Q9NSB2 600 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 FAM118AQ9NWS6 357 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 TRNAU1APQ9NX07 287 aaKnown RBP4.22□□□□□ -1.73
ATXN3-241ENST00000556374 ADPRHL2Q9NX46 363 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 TMEM161AQ9NX61 479 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 GIN1Q9NXP7 522 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 ARL15Q9NXU5 204 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 GALPQ9UBC7 116 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 MTRRQ9UBK8 725 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 ENOPH1Q9UHY7 261 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 CD207Q9UJ71 328 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 ZNF229Q9UJW7 825 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 PCDHB7Q9Y5E2 793 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 DGKBQ9Y6T7 804 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 MYO10Q9HD67 2058 aa4.22□□□□□ -1.73
ATXN3-241ENST00000556374 A0A0D9SEW6 157 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms