RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 TTC29Q8NA56 475 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-238ENST00000556288 CPEB3Q8NE35 698 aaKnown RBP4.43□□□□□ -1.7
ATXN3-238ENST00000556288 OR2L3Q8NG85 312 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 OR8K5Q8NH50 307 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 PROKR1Q8TCW9 393 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 CT55Q8WUE5 264 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 ANKRD49Q8WVL7 239 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 ATL1Q8WXF7 558 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 CCT6BQ92526 530 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 ESAMQ96AP7 390 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 NXNL1Q96CM4 212 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 ZNF501Q96CX3 271 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-238ENST00000556288 SLC41A2Q96JW4 573 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 CABS1Q96KC9 395 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 FCRL4Q96PJ5 515 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 MACROD1Q9BQ69 325 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 WDR83Q9BRX9 315 aaKnown RBP4.43□□□□□ -1.7
ATXN3-238ENST00000556288 C1orf43Q9BWL3 253 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 NLNQ9BYT8 704 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 CHST8Q9H2A9 424 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 CDC42EP4Q9H3Q1 356 aaKnown RBP4.43□□□□□ -1.7
ATXN3-238ENST00000556288 AKIRIN1Q9H9L7 192 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-238ENST00000556288 PLAC1Q9HBJ0 212 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 NMRAL1Q9HBL8 299 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 CCDC177Q9NQR7 707 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-238ENST00000556288 PNPOQ9NVS9 261 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 EURLQ9NYK6 297 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 WWOXQ9NZC7 414 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 SPATA7Q9P0W8 599 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 IFT80Q9P2H3 777 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-238ENST00000556288 CPSF2Q9P2I0 782 aaKnown RBP4.43□□□□□ -1.7
ATXN3-238ENST00000556288 DHCR7Q9UBM7 475 aaKnown RBP4.43□□□□□ -1.7
ATXN3-238ENST00000556288 DKK4Q9UBT3 224 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 TBK1Q9UHD2 729 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 IL17BQ9UHF5 180 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 PILRAQ9UKJ1 303 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 CORO1CQ9ULV4 474 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-238ENST00000556288 FARSAQ9Y285 508 aaKnown RBP4.43□□□□□ -1.7
ATXN3-238ENST00000556288 ACOT9Q9Y305 439 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 ANGPTL3Q9Y5C1 460 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 NOX1Q9Y5S8 564 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 MAU2Q9Y6X3 613 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 CEP295Q9C0D2 2601 aa4.43□□□□□ -1.7
ATXN3-238ENST00000556288 SPEGQ15772 3267 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 FRYQ5TBA9 3013 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 A0A087WV48 116 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 A0A096LPK6 155 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 A0A1W2PPV9 198 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 HYKKA2RU49 373 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 A6NL46 340 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 TARM1B6A8C7 271 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 TRIM49D1C9J1S8 452 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 C9J4A7 227 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 E7ENX8 843 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 H0YGG7 62 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 GOLGA8RI6L899 631 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 MYO1CO00159 1063 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 DYNC1I1O14576 645 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 SH3BGRLO75368 114 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 KRT38O76015 456 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 WDR47O94967 919 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 SLU7O95391 586 aaKnown RBP4.42□□□□□ -1.7
ATXN3-238ENST00000556288 ELANEP08246 267 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 PIM1P11309 404 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-238ENST00000556288 CDH1P12830 882 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 GFAPP14136 432 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 NPPBP16860 134 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 TFEBP19484 476 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 IMPA1P29218 277 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 CRABP2P29373 138 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 OTX2P32243 289 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 HNF4AP41235 474 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 GDF5P43026 501 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 SLCO1A2P46721 670 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 OR1D4P47884 311 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 PIK3CGP48736 1102 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 HSPA7P48741 367 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 CCL11P51671 97 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 CCR8P51685 355 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 ARSFP54793 590 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 ARF3P61204 181 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-238ENST00000556288 RPS18P62269 152 aaKnown RBP4.42□□□□□ -1.7
ATXN3-238ENST00000556288 DCDP81605 110 aaKnown RBP4.42□□□□□ -1.7
ATXN3-238ENST00000556288 TAP2Q03519 686 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 OCA2Q04671 838 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 TLE3Q04726 772 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 PRDX1Q06830 199 aaKnown RBP4.42□□□□□ -1.7
ATXN3-238ENST00000556288 IFFO1Q0D2I5 559 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 GPS2Q13227 327 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 DNASE1L3Q13609 305 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 LY6DQ14210 128 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 FRG1Q14331 258 aaKnown RBP4.42□□□□□ -1.7
ATXN3-238ENST00000556288 SLC29A2Q14542 456 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 ARHGAP19Q14CB8 494 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 MLC1Q15049 377 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 FAM83EQ2M2I3 478 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 UBAP2Q5T6F2 1119 aaKnown RBP4.42□□□□□ -1.7
ATXN3-238ENST00000556288 ATP1A1-AS1Q5TC04 95 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 FAM69BQ5VUD6 431 aa4.42□□□□□ -1.7
ATXN3-238ENST00000556288 B3GNTL1Q67FW5 361 aaPredicted RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms