RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 ASB5Q8WWX0 329 aa12.28□□□□□ -0.44
TGFB3-204ENST00000556285 CDKL2Q92772 493 aa12.28□□□□□ -0.44
TGFB3-204ENST00000556285 UCN3Q969E3 161 aa12.28□□□□□ -0.44
TGFB3-204ENST00000556285 SENP5Q96HI0 755 aaPredicted RBP12.28□□□□□ -0.44
TGFB3-204ENST00000556285 ATOH8Q96SQ7 321 aa12.28□□□□□ -0.44
TGFB3-204ENST00000556285 FAM173AQ9BQD7 235 aa12.28□□□□□ -0.44
TGFB3-204ENST00000556285 CNPPD1Q9BV87 410 aa12.28□□□□□ -0.44
TGFB3-204ENST00000556285 TXNDC16Q9P2K2 825 aa12.28□□□□□ -0.44
TGFB3-204ENST00000556285 FAM215AQ9Y5M1 114 aa12.28□□□□□ -0.44
TGFB3-204ENST00000556285 ATP6AP2A0A1C7CYW4 349 aa12.27□□□□□ -0.45
TGFB3-204ENST00000556285 FAM187AA6NFU0 413 aa12.27□□□□□ -0.45
TGFB3-204ENST00000556285 ACOT7O00154 380 aa12.27□□□□□ -0.45
TGFB3-204ENST00000556285 EIF3HO15372 352 aaKnown RBP eCLIP12.27□□□□□ -0.45
TGFB3-204ENST00000556285 ATP6AP2O75787 350 aa12.27□□□□□ -0.45
TGFB3-204ENST00000556285 LRATO95237 230 aa12.27□□□□□ -0.45
TGFB3-204ENST00000556285 NADKO95544 446 aaPredicted RBP12.27□□□□□ -0.45
TGFB3-204ENST00000556285 IGHG3P01860 377 aa12.27□□□□□ -0.45
TGFB3-204ENST00000556285 MSX1P28360 303 aa12.27□□□□□ -0.45
TGFB3-204ENST00000556285 SPRP35270 261 aaPredicted RBP12.27□□□□□ -0.45
TGFB3-204ENST00000556285 SSR2P43308 183 aa12.27□□□□□ -0.45
TGFB3-204ENST00000556285 HNRNPH2P55795 449 aaKnown RBP12.27□□□□□ -0.45
TGFB3-204ENST00000556285 IGLV3-21P80748 117 aaPredicted RBP12.27□□□□□ -0.45
TGFB3-204ENST00000556285 IRF9Q00978 393 aa12.27□□□□□ -0.45
TGFB3-204ENST00000556285 CALCOCO2Q13137 446 aa12.27□□□□□ -0.45
TGFB3-204ENST00000556285 SLAMF1Q13291 335 aa12.27□□□□□ -0.45
TGFB3-204ENST00000556285 DDX39BQ13838 428 aaKnown RBP12.27□□□□□ -0.45
TGFB3-204ENST00000556285 ZNF791Q3KP31 576 aaPredicted RBP12.27□□□□□ -0.45
TGFB3-204ENST00000556285 TMEM35AQ53FP2 167 aa12.27□□□□□ -0.45
TGFB3-204ENST00000556285 PIGGQ5H8A4 983 aa12.27□□□□□ -0.45
TGFB3-204ENST00000556285 KHDRBS2Q5VWX1 349 aaKnown RBP12.27□□□□□ -0.45
TGFB3-204ENST00000556285 MED27Q6P2C8 311 aa12.27□□□□□ -0.45
TGFB3-204ENST00000556285 LYPD8Q6UX82 237 aa12.27□□□□□ -0.45
TGFB3-204ENST00000556285 SPNS3Q6ZMD2 512 aa12.27□□□□□ -0.45
TGFB3-204ENST00000556285 GK5Q6ZS86 529 aa12.27□□□□□ -0.45
TGFB3-204ENST00000556285 FAM47EQ6ZV65 393 aa12.27□□□□□ -0.45
TGFB3-204ENST00000556285 CYS1Q717R9 158 aa12.27□□□□□ -0.45
TGFB3-204ENST00000556285 TRILQ7L0X0 811 aa12.27□□□□□ -0.45
TGFB3-204ENST00000556285 SLC22A16Q86VW1 577 aa12.27□□□□□ -0.45
TGFB3-204ENST00000556285 SPATA4Q8NEY3 305 aa12.27□□□□□ -0.45
TGFB3-204ENST00000556285 OR5M3Q8NGP4 307 aa12.27□□□□□ -0.45
TGFB3-204ENST00000556285 OR8K3Q8NH51 312 aa12.27□□□□□ -0.45
TGFB3-204ENST00000556285 KCTD4Q8WVF5 259 aa12.27□□□□□ -0.45
TGFB3-204ENST00000556285 NXNL1Q96CM4 212 aa12.27□□□□□ -0.45
TGFB3-204ENST00000556285 SMC6Q96SB8 1091 aa12.27□□□□□ -0.45
TGFB3-204ENST00000556285 PHACTR1Q9C0D0 580 aa12.27□□□□□ -0.45
TGFB3-204ENST00000556285 ROGDIQ9GZN7 287 aa12.27□□□□□ -0.45
TGFB3-204ENST00000556285 IL1RL2Q9HB29 575 aa12.27□□□□□ -0.45
TGFB3-204ENST00000556285 PRM3Q9NNZ6 103 aa12.27□□□□□ -0.45
TGFB3-204ENST00000556285 SACM1LQ9NTJ5 587 aa12.27□□□□□ -0.45
TGFB3-204ENST00000556285 NUDT4Q9NZJ9 180 aa12.27□□□□□ -0.45
TGFB3-204ENST00000556285 ATG4BQ9Y4P1 393 aa12.27□□□□□ -0.45
TGFB3-204ENST00000556285 A0A1B0GVC2 190 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 K7EPI3 171 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 PLPP1O14494 284 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 IGKV3-11P04433 115 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 RFPL3SP0C7P2 107 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 GLI4P10075 376 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 MTHFD2P13995 350 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 CAPN3P20807 821 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 ACVR2AP27037 513 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 STT3AP46977 705 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 PLTPP55058 493 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 FOLH1Q04609 750 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 SLMAPQ14BN4 828 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 DEPDC1Q5TB30 811 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 GRTP1Q5TC63 336 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 NDUFAF5Q5TEU4 345 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 OR4C11Q6IEV9 310 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 GRHL2Q6ISB3 625 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 PAOXQ6QHF9 649 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 OPN5Q6U736 354 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 ZDHHC24Q6UX98 284 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 RGS9BPQ6ZS82 235 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 RAPH1Q70E73 1250 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 CHSY3Q70JA7 882 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 CCDC25Q86WR0 208 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 LIX1LQ8IVB5 337 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 DMRTC2Q8IXT2 367 aaPredicted RBP12.26□□□□□ -0.45
TGFB3-204ENST00000556285 FAM109AQ8N4B1 249 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 TEX9Q8N6V9 391 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 GOLM1Q8NBJ4 401 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 SRFBP1Q8NEF9 429 aaKnown RBP12.26□□□□□ -0.45
TGFB3-204ENST00000556285 OR5L2Q8NGL0 311 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 HUS1BQ8NHY5 278 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 STAG3L4Q8TBR4 150 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 FBF1Q8TES7 1133 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 UBTD2Q8WUN7 234 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 CMTM7Q96FZ5 175 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 DGAT2Q96PD7 388 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 MTERF1Q99551 399 aaKnown RBP12.26□□□□□ -0.45
TGFB3-204ENST00000556285 TTYH2Q9BSA4 534 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 RPF2Q9H7B2 306 aaKnown RBP12.26□□□□□ -0.45
TGFB3-204ENST00000556285 PROK2Q9HC23 129 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 SH2D2AQ9NP31 389 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 KCNJ16Q9NPI9 418 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 SPRR3Q9UBC9 169 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 OPTCQ9UBM4 332 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 NINQ8N4C6 2090 aa12.26□□□□□ -0.45
TGFB3-204ENST00000556285 PRRC2AP48634 2157 aaKnown RBP12.26□□□□□ -0.45
TGFB3-204ENST00000556285 A0A0G2JNJ9 132 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms