RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 SPATA19Q7Z5L4 167 aa2.33□□□□□ -2.04
SNX6-204ENST00000555541 PCGF5Q86SE9 256 aa2.33□□□□□ -2.04
SNX6-204ENST00000555541 C4orf19Q8IY42 314 aa2.33□□□□□ -2.04
SNX6-204ENST00000555541 OR1K1Q8NGR3 316 aa2.33□□□□□ -2.04
SNX6-204ENST00000555541 LINC01006Q8NI28 216 aa2.33□□□□□ -2.04
SNX6-204ENST00000555541 EXOC4Q96A65 974 aa2.33□□□□□ -2.04
SNX6-204ENST00000555541 RAB3IPQ96QF0 476 aaPredicted RBP2.33□□□□□ -2.04
SNX6-204ENST00000555541 CCT8L2Q96SF2 557 aa2.33□□□□□ -2.04
SNX6-204ENST00000555541 INTS14Q96SY0 518 aa2.33□□□□□ -2.04
SNX6-204ENST00000555541 TTYH2Q9BSA4 534 aa2.33□□□□□ -2.04
SNX6-204ENST00000555541 ATG101Q9BSB4 218 aa2.33□□□□□ -2.04
SNX6-204ENST00000555541 MRPL17Q9NRX2 175 aaKnown RBP2.33□□□□□ -2.04
SNX6-204ENST00000555541 GPR173Q9NS66 373 aa2.33□□□□□ -2.04
SNX6-204ENST00000555541 SENP1Q9P0U3 644 aa2.33□□□□□ -2.04
SNX6-204ENST00000555541 KIAA1217Q5T5P2 1943 aa2.32□□□□□ -2.04
SNX6-204ENST00000555541 M0R296 226 aa2.32□□□□□ -2.04
SNX6-204ENST00000555541 DUSP11O75319 330 aaKnown RBP2.32□□□□□ -2.04
SNX6-204ENST00000555541 SIX3O95343 332 aaPredicted RBP2.32□□□□□ -2.04
SNX6-204ENST00000555541 ZFYP08048 801 aaPredicted RBP2.32□□□□□ -2.04
SNX6-204ENST00000555541 PGAM2P15259 253 aa2.32□□□□□ -2.04
SNX6-204ENST00000555541 GJB2P29033 226 aa2.32□□□□□ -2.04
SNX6-204ENST00000555541 PPP2R1BP30154 601 aa2.32□□□□□ -2.04
SNX6-204ENST00000555541 IER3P46695 156 aa2.32□□□□□ -2.04
SNX6-204ENST00000555541 RIPK4P57078 832 aa2.32□□□□□ -2.04
SNX6-204ENST00000555541 RPL27P61353 136 aaKnown RBP2.32□□□□□ -2.04
SNX6-204ENST00000555541 MFGE8Q08431 387 aaPredicted RBP2.32□□□□□ -2.04
SNX6-204ENST00000555541 RALBP1Q15311 655 aa2.32□□□□□ -2.04
SNX6-204ENST00000555541 PPP1R3AQ16821 1122 aa2.32□□□□□ -2.04
SNX6-204ENST00000555541 CNPY1Q3B7I2 92 aa2.32□□□□□ -2.04
SNX6-204ENST00000555541 ANKRD55Q3KP44 614 aa2.32□□□□□ -2.04
SNX6-204ENST00000555541 AGAP6Q5VW22 663 aa2.32□□□□□ -2.04
SNX6-204ENST00000555541 ADGRD2Q7Z7M1 963 aa2.32□□□□□ -2.04
SNX6-204ENST00000555541 GVQW1Q8N7I0 195 aa2.32□□□□□ -2.04
SNX6-204ENST00000555541 ZNF564Q8TBZ8 553 aaPredicted RBP2.32□□□□□ -2.04
SNX6-204ENST00000555541 VN1R17PQ8TDU5 208 aa2.32□□□□□ -2.04
SNX6-204ENST00000555541 CKAP2Q8WWK9 683 aa2.32□□□□□ -2.04
SNX6-204ENST00000555541 SIPA1Q96FS4 1042 aa2.32□□□□□ -2.04
SNX6-204ENST00000555541 DPEP3Q9H4B8 488 aa2.32□□□□□ -2.04
SNX6-204ENST00000555541 PLSCR3Q9NRY6 295 aa2.32□□□□□ -2.04
SNX6-204ENST00000555541 MLXQ9UH92 298 aa2.32□□□□□ -2.04
SNX6-204ENST00000555541 ANAPC5Q9UJX4 755 aa2.32□□□□□ -2.04
SNX6-204ENST00000555541 CFAP65Q6ZU64 1925 aaKnown RBP2.32□□□□□ -2.04
SNX6-204ENST00000555541 IGHV3-35A0A0C4DH35 117 aa2.31□□□□□ -2.04
SNX6-204ENST00000555541 EPOPA6NHQ4 379 aa2.31□□□□□ -2.04
SNX6-204ENST00000555541 KBTBD13C9JR72 458 aa2.31□□□□□ -2.04
SNX6-204ENST00000555541 CSO75390 466 aaKnown RBP2.31□□□□□ -2.04
SNX6-204ENST00000555541 LETM1O95202 739 aaPredicted RBP2.31□□□□□ -2.04
SNX6-204ENST00000555541 LDHCP07864 332 aa2.31□□□□□ -2.04
SNX6-204ENST00000555541 P4HA1P13674 534 aa2.31□□□□□ -2.04
SNX6-204ENST00000555541 PRKCIP41743 596 aa2.31□□□□□ -2.04
SNX6-204ENST00000555541 MAGEA9P43362 315 aa2.31□□□□□ -2.04
SNX6-204ENST00000555541 CCR4P51679 360 aa2.31□□□□□ -2.04
SNX6-204ENST00000555541 PSMD6Q15008 389 aa2.31□□□□□ -2.04
SNX6-204ENST00000555541 GCNT7Q6ZNI0 430 aa2.31□□□□□ -2.04
SNX6-204ENST00000555541 CYP4V2Q6ZWL3 525 aaPredicted RBP2.31□□□□□ -2.04
SNX6-204ENST00000555541 ZNF444Q8N0Y2 327 aaPredicted RBP2.31□□□□□ -2.04
SNX6-204ENST00000555541 ARL14Q8N4G2 192 aa2.31□□□□□ -2.04
SNX6-204ENST00000555541 TCP11Q8WWU5 503 aa2.31□□□□□ -2.04
SNX6-204ENST00000555541 FAF2Q96CS3 445 aa2.31□□□□□ -2.04
SNX6-204ENST00000555541 RAB40CQ96S21 281 aa2.31□□□□□ -2.04
SNX6-204ENST00000555541 RASL10BQ96S79 203 aa2.31□□□□□ -2.04
SNX6-204ENST00000555541 C17orf62Q9BQA9 187 aa2.31□□□□□ -2.04
SNX6-204ENST00000555541 LSG1Q9H089 658 aaKnown RBP2.31□□□□□ -2.04
SNX6-204ENST00000555541 GPR132Q9UNW8 380 aa2.31□□□□□ -2.04
SNX6-204ENST00000555541 ATP6AP2A0A1C7CYW4 349 aa2.3□□□□□ -2.04
SNX6-204ENST00000555541 KIAA0513O60268 411 aa2.3□□□□□ -2.04
SNX6-204ENST00000555541 PLOD3O60568 738 aa2.3□□□□□ -2.04
SNX6-204ENST00000555541 PROS1P07225 676 aa2.3□□□□□ -2.04
SNX6-204ENST00000555541 TSPY3P0CV98 308 aa2.3□□□□□ -2.04
SNX6-204ENST00000555541 TSPY8P0CW00 308 aa2.3□□□□□ -2.04
SNX6-204ENST00000555541 HSD17B1P14061 328 aa2.3□□□□□ -2.04
SNX6-204ENST00000555541 GLRA1P23415 457 aa2.3□□□□□ -2.04
SNX6-204ENST00000555541 PRKAR2BP31323 418 aa2.3□□□□□ -2.04
SNX6-204ENST00000555541 OR1D2P34982 312 aa2.3□□□□□ -2.04
SNX6-204ENST00000555541 NDST1P52848 882 aa2.3□□□□□ -2.04
SNX6-204ENST00000555541 SLC3A1Q07837 685 aa2.3□□□□□ -2.04
SNX6-204ENST00000555541 EMC2Q15006 297 aa2.3□□□□□ -2.04
SNX6-204ENST00000555541 CAPN13Q6MZZ7 669 aaPredicted RBP2.3□□□□□ -2.04
SNX6-204ENST00000555541 ZNF544Q6NX49 715 aa2.3□□□□□ -2.04
SNX6-204ENST00000555541 TRAT1Q6PIZ9 186 aa2.3□□□□□ -2.04
SNX6-204ENST00000555541 SLFN11Q7Z7L1 901 aa2.3□□□□□ -2.04
SNX6-204ENST00000555541 FBXO16Q8IX29 292 aaPredicted RBP2.3□□□□□ -2.04
SNX6-204ENST00000555541 GPR137CQ8N3F9 429 aa2.3□□□□□ -2.04
SNX6-204ENST00000555541 KIAA0895Q8NCT3 520 aa2.3□□□□□ -2.04
SNX6-204ENST00000555541 OR4F5Q8NH21 305 aa2.3□□□□□ -2.04
SNX6-204ENST00000555541 ZNF671Q8TAW3 534 aa2.3□□□□□ -2.04
SNX6-204ENST00000555541 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.3□□□□□ -2.04
SNX6-204ENST00000555541 DNASE1L2Q92874 299 aa2.3□□□□□ -2.04
SNX6-204ENST00000555541 MRPL24Q96A35 216 aaKnown RBP2.3□□□□□ -2.04
SNX6-204ENST00000555541 PNPLA2Q96AD5 504 aa2.3□□□□□ -2.04
SNX6-204ENST00000555541 ZNF799Q96GE5 643 aa2.3□□□□□ -2.04
SNX6-204ENST00000555541 C16orf58Q96GQ5 468 aa2.3□□□□□ -2.04
SNX6-204ENST00000555541 WWP1Q9H0M0 922 aa2.3□□□□□ -2.04
SNX6-204ENST00000555541 IKZF5Q9H5V7 419 aa2.3□□□□□ -2.04
SNX6-204ENST00000555541 IL1RL2Q9HB29 575 aa2.3□□□□□ -2.04
SNX6-204ENST00000555541 SLCO1C1Q9NYB5 712 aa2.3□□□□□ -2.04
SNX6-204ENST00000555541 IGHV3OR16-12A0A075B7B8 117 aa2.29□□□□□ -2.04
SNX6-204ENST00000555541 ARHGEF37A1IGU5 675 aa2.29□□□□□ -2.04
SNX6-204ENST00000555541 YDJCA8MPS7 323 aa2.29□□□□□ -2.04
SNX6-204ENST00000555541 CTDSPLO15194 276 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms