RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 CROCCQ5TZA2 2017 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 MYOCOSA0A1B0GUC4 107 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 GNG14A0A1W2PPG7 69 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 OR5H15A6NDH6 313 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 GOLGA6L10A6NI86 522 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 GLOD5A6NK44 160 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 TGFBR3LH3BV60 316 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 FGF17O60258 216 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 WISP1O95388 367 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 AIFM1O95831 613 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 CHEK2O96017 543 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 PIK3R1P27986 724 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 TNFSF10P50591 281 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 OC90Q02509 493 aaPredicted RBP11.3□□□□□ -0.6
SRP54-206ENST00000555317 KCNC4Q03721 635 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 FOLH1Q04609 750 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 ACSM2AQ08AH3 577 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 PCLAFQ15004 111 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 SPIN4Q56A73 249 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 SPDYAQ5MJ70 313 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 TCHHL1Q5QJ38 904 aaPredicted RBP11.3□□□□□ -0.6
SRP54-206ENST00000555317 ACSM2BQ68CK6 577 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 H3F3CQ6NXT2 135 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 RPS19BP1Q86WX3 136 aaKnown RBP11.3□□□□□ -0.6
SRP54-206ENST00000555317 HOMEZQ8IX15 550 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 OR4N5Q8IXE1 308 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 C1orf52Q8N6N3 182 aaKnown RBP11.3□□□□□ -0.6
SRP54-206ENST00000555317 Q8NA96 180 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 MORN4Q8NDC4 146 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 PPP1R14CQ8TAE6 165 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 TCP10LQ8TDR4 215 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 ART5Q96L15 291 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 C5orf34Q96MH7 638 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 KCNA7Q96RP8 456 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 TRMOQ9BU70 441 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 FAIM2Q9BWQ8 316 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 OR8D2Q9GZM6 311 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 CDCP1Q9H5V8 836 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 EML4Q9HC35 981 aaKnown RBP11.3□□□□□ -0.6
SRP54-206ENST00000555317 AGPAT4Q9NRZ5 378 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 ASB4Q9Y574 426 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 TIMM22Q9Y584 194 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 PCDHGA10Q9Y5H3 936 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 CSAG2Q9Y5P2 127 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 COPG1Q9Y678 874 aaKnown RBP11.3□□□□□ -0.6
SRP54-206ENST00000555317 SPENQ96T58 3664 aaKnown RBP11.3□□□□□ -0.6
SRP54-206ENST00000555317 ESPL1Q14674 2120 aa11.3□□□□□ -0.6
SRP54-206ENST00000555317 SHANK1Q9Y566 2161 aa11.29□□□□□ -0.6
SRP54-206ENST00000555317 A0A1W2PR48 441 aa11.29□□□□□ -0.6
SRP54-206ENST00000555317 GABRR3A8MPY1 467 aa11.29□□□□□ -0.6
SRP54-206ENST00000555317 PRKRAO75569 313 aaKnown RBP11.29□□□□□ -0.6
SRP54-206ENST00000555317 ZFAND5O76080 213 aa11.29□□□□□ -0.6
SRP54-206ENST00000555317 GPR75O95800 540 aa11.29□□□□□ -0.6
SRP54-206ENST00000555317 UROSP10746 265 aa11.29□□□□□ -0.6
SRP54-206ENST00000555317 ALOX15P16050 662 aaPredicted RBP11.29□□□□□ -0.6
SRP54-206ENST00000555317 TPP2P29144 1249 aaPredicted RBP11.29□□□□□ -0.6
SRP54-206ENST00000555317 STT3AP46977 705 aa11.29□□□□□ -0.6
SRP54-206ENST00000555317 FOXK1P85037 733 aa11.29□□□□□ -0.6
SRP54-206ENST00000555317 IGFBP7Q16270 282 aa11.29□□□□□ -0.6
SRP54-206ENST00000555317 PRR30Q53SZ7 412 aaPredicted RBP11.29□□□□□ -0.6
SRP54-206ENST00000555317 NDUFAF5Q5TEU4 345 aa11.29□□□□□ -0.6
SRP54-206ENST00000555317 MRM1Q6IN84 353 aaKnown RBP11.29□□□□□ -0.6
SRP54-206ENST00000555317 FAM180AQ6UWF9 173 aa11.29□□□□□ -0.6
SRP54-206ENST00000555317 LRIG3Q6UXM1 1119 aa11.29□□□□□ -0.6
SRP54-206ENST00000555317 HSDL2Q6YN16 418 aa11.29□□□□□ -0.6
SRP54-206ENST00000555317 CISD2Q8N5K1 135 aaKnown RBP11.29□□□□□ -0.6
SRP54-206ENST00000555317 CATSPER1Q8NEC5 780 aa11.29□□□□□ -0.6
SRP54-206ENST00000555317 NFAM1Q8NET5 270 aaPredicted RBP11.29□□□□□ -0.6
SRP54-206ENST00000555317 THAP3Q8WTV1 239 aaPredicted RBP11.29□□□□□ -0.6
SRP54-206ENST00000555317 MIB2Q96AX9 1013 aa11.29□□□□□ -0.6
SRP54-206ENST00000555317 ANKRD9Q96BM1 317 aaPredicted RBP11.29□□□□□ -0.6
SRP54-206ENST00000555317 ZIM3Q96PE6 472 aa11.29□□□□□ -0.6
SRP54-206ENST00000555317 ACPTQ9BZG2 426 aa11.29□□□□□ -0.6
SRP54-206ENST00000555317 SHCBP1LQ9BZQ2 653 aa11.29□□□□□ -0.6
SRP54-206ENST00000555317 RRAGDQ9NQL2 400 aaPredicted RBP11.29□□□□□ -0.6
SRP54-206ENST00000555317 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.29□□□□□ -0.6
SRP54-206ENST00000555317 SLC17A7Q9P2U7 560 aa11.29□□□□□ -0.6
SRP54-206ENST00000555317 CDK2AP1O14519 115 aa11.28□□□□□ -0.6
SRP54-206ENST00000555317 UBFD1O14562 309 aaKnown RBP11.28□□□□□ -0.6
SRP54-206ENST00000555317 CTIFO43310 598 aaKnown RBP11.28□□□□□ -0.6
SRP54-206ENST00000555317 PCDH7O60245 1069 aa11.28□□□□□ -0.6
SRP54-206ENST00000555317 PRAMEF2O60811 474 aa11.28□□□□□ -0.6
SRP54-206ENST00000555317 CD46P15529 392 aa11.28□□□□□ -0.6
SRP54-206ENST00000555317 ALDH3A1P30838 453 aa11.28□□□□□ -0.6
SRP54-206ENST00000555317 ALDH9A1P49189 494 aa11.28□□□□□ -0.6
SRP54-206ENST00000555317 HTR6P50406 440 aa11.28□□□□□ -0.6
SRP54-206ENST00000555317 TRA2BP62995 288 aaKnown RBP11.28□□□□□ -0.6
SRP54-206ENST00000555317 IGLV3-21P80748 117 aaPredicted RBP11.28□□□□□ -0.6
SRP54-206ENST00000555317 HMGCS1Q01581 520 aa11.28□□□□□ -0.6
SRP54-206ENST00000555317 BTKQ06187 659 aa11.28□□□□□ -0.6
SRP54-206ENST00000555317 GALNT1Q10472 559 aaPredicted RBP11.28□□□□□ -0.6
SRP54-206ENST00000555317 TBL3Q12788 808 aaKnown RBP11.28□□□□□ -0.6
SRP54-206ENST00000555317 TUBA3CQ13748 450 aa11.28□□□□□ -0.6
SRP54-206ENST00000555317 ELOAQ14241 798 aaKnown RBP11.28□□□□□ -0.6
SRP54-206ENST00000555317 OR1C1Q15619 314 aa11.28□□□□□ -0.6
SRP54-206ENST00000555317 INAQ16352 499 aa11.28□□□□□ -0.6
SRP54-206ENST00000555317 ZNF766Q5HY98 468 aa11.28□□□□□ -0.6
SRP54-206ENST00000555317 TUBA3EQ6PEY2 450 aa11.28□□□□□ -0.6
SRP54-206ENST00000555317 SCIMPQ6UWF3 145 aa11.28□□□□□ -0.6
SRP54-206ENST00000555317 ST13P4Q8IZP2 240 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms