RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 SKA2Q8WVK7 121 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-229ENST00000554672 TMEM158Q8WZ71 300 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 PIGTQ969N2 578 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 SARAFQ96BY9 339 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 IQCDQ96DY2 449 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 PANX3Q96QZ0 392 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 OR1F2PQ96R84 312 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 PIP5K1AQ99755 562 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 EBNA1BP2Q99848 306 aaKnown RBP4.47□□□□□ -1.69
ATXN3-229ENST00000554672 PACSIN1Q9BY11 444 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 NAT10Q9H0A0 1025 aaKnown RBP4.47□□□□□ -1.69
ATXN3-229ENST00000554672 PIF1Q9H611 641 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 C10orf88Q9H8K7 445 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 ZDHHC11Q9H8X9 412 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 SYNPO2LQ9H987 977 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 ANKHQ9HCJ1 492 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 ALKBH4Q9NXW9 302 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 HCN3Q9P1Z3 774 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 MTRF1LQ9UGC7 380 aaKnown RBP4.47□□□□□ -1.69
ATXN3-229ENST00000554672 TRPS1Q9UHF7 1281 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 PCYOX1Q9UHG3 505 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 MAGEL2Q9UJ55 1249 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 CAPN11Q9UMQ6 739 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 NENFQ9UMX5 172 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 FAM215AQ9Y5M1 114 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 NFS1Q9Y697 457 aa4.47□□□□□ -1.69
ATXN3-229ENST00000554672 PCM1Q15154 2024 aa4.46□□□□□ -1.69
ATXN3-229ENST00000554672 hCG_1818297A0A087WSY0 165 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 KRTAP23-1A1A580 65 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 OR51F1A6NGY5 319 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 CLCA1A8K7I4 914 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 ARHGEF33A8MVX0 844 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 APOC4-APOC2K7ER74 178 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 PRMT5O14744 637 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-229ENST00000554672 P2RX6O15547 441 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 PSMD3O43242 534 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 SPOPO43791 374 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 KIF5CO60282 957 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 SMPD2O60906 423 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 ZNF189O75820 626 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-229ENST00000554672 GOT2P00505 430 aaKnown RBP4.46□□□□□ -1.7
ATXN3-229ENST00000554672 APOC2P02655 101 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 FHP07954 510 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 ERGP11308 486 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 HRH2P25021 359 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 CTNNA2P26232 953 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 BDKRB1P46663 353 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 MAN2A2P49641 1150 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 ASCL1P50553 236 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 NR0B1P51843 470 aaKnown RBP4.46□□□□□ -1.7
ATXN3-229ENST00000554672 IRF9Q00978 393 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 TSTA3Q13630 321 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-229ENST00000554672 POU6F1Q14863 301 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 SLC10A1Q14973 349 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 SLC18A3Q16572 532 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 STX1AQ16623 288 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 PARP6Q2NL67 630 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 FASTKD1Q53R41 847 aaKnown RBP4.46□□□□□ -1.7
ATXN3-229ENST00000554672 AARS2Q5JTZ9 985 aaKnown RBP4.46□□□□□ -1.7
ATXN3-229ENST00000554672 WLSQ5T9L3 541 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 CCDC181Q5TID7 509 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 PTRHD1Q6GMV3 140 aaKnown RBP4.46□□□□□ -1.7
ATXN3-229ENST00000554672 HMBOX1Q6NT76 420 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 PODNL1Q6PEZ8 512 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 DARS2Q6PI48 645 aaKnown RBP4.46□□□□□ -1.7
ATXN3-229ENST00000554672 AFTPHQ6ULP2 937 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 SUSD1Q6UWL2 747 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 C16orf47Q6ZP98 133 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-229ENST00000554672 BBS12Q6ZW61 710 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 OTOAQ7RTW8 1153 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 MDGA2Q7Z553 956 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 ADCK2Q7Z695 626 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 ADGRE4PQ86SQ3 457 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 PLD3Q8IV08 490 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 CDKL3Q8IVW4 592 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-229ENST00000554672 RHOT2Q8IXI1 618 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 PHC2Q8IXK0 858 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 GPALPP1Q8IXQ4 340 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 KRT222Q8N1A0 295 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 LILRB2Q8N423 598 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 CAMKVQ8NCB2 501 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 NFAM1Q8NET5 270 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-229ENST00000554672 OR4L1Q8NH43 312 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 LINC01560Q8TB33 94 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 LKAAEAR1Q8TD35 194 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 TSLPQ969D9 159 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 TBC1D20Q96BZ9 403 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 HAUS1Q96CS2 278 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 Q96MF0 132 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 PRAP1Q96NZ9 151 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 PANX2Q96RD6 677 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 GPHA2Q96T91 129 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 SH3GL2Q99962 352 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 FAM129AQ9BZQ8 928 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 ATG10Q9H0Y0 220 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 LRRC40Q9H9A6 602 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 LANCL2Q9NS86 450 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 LMBRD1Q9NUN5 540 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 TMEM184CQ9NVA4 438 aa4.46□□□□□ -1.7
ATXN3-229ENST00000554672 ZNF629Q9UEG4 869 aaPredicted RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms