RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 ANKRD9Q96BM1 317 aaPredicted RBP8.12□□□□□ -1.11
ACTN1-213ENST00000554508 RBM18Q96H35 190 aaKnown RBP8.12□□□□□ -1.11
ACTN1-213ENST00000554508 ART5Q96L15 291 aa8.12□□□□□ -1.11
ACTN1-213ENST00000554508 GPR137Q96N19 417 aa8.12□□□□□ -1.11
ACTN1-213ENST00000554508 FRMD6Q96NE9 622 aa8.12□□□□□ -1.11
ACTN1-213ENST00000554508 ZIM3Q96PE6 472 aa8.12□□□□□ -1.11
ACTN1-213ENST00000554508 SERPINI1Q99574 410 aa8.12□□□□□ -1.11
ACTN1-213ENST00000554508 ROPN1BQ9BZX4 212 aaPredicted RBP8.12□□□□□ -1.11
ACTN1-213ENST00000554508 MRPL46Q9H2W6 279 aaKnown RBP8.12□□□□□ -1.11
ACTN1-213ENST00000554508 CENPHQ9H3R5 247 aa8.12□□□□□ -1.11
ACTN1-213ENST00000554508 RPF2Q9H7B2 306 aaKnown RBP8.12□□□□□ -1.11
ACTN1-213ENST00000554508 DDX31Q9H8H2 851 aaKnown RBP8.12□□□□□ -1.11
ACTN1-213ENST00000554508 ROPN1Q9HAT0 212 aaPredicted RBP8.12□□□□□ -1.11
ACTN1-213ENST00000554508 RYDENQ9NUL5 291 aaKnown RBP8.12□□□□□ -1.11
ACTN1-213ENST00000554508 AHSPQ9NZD4 102 aa8.12□□□□□ -1.11
ACTN1-213ENST00000554508 XPR1Q9UBH6 696 aa8.12□□□□□ -1.11
ACTN1-213ENST00000554508 SUCOQ9UBS9 1254 aaKnown RBP8.12□□□□□ -1.11
ACTN1-213ENST00000554508 ZNF223Q9UK11 482 aaPredicted RBP8.12□□□□□ -1.11
ACTN1-213ENST00000554508 PCTPQ9UKL6 214 aa8.12□□□□□ -1.11
ACTN1-213ENST00000554508 KLF13Q9Y2Y9 288 aaPredicted RBP8.12□□□□□ -1.11
ACTN1-213ENST00000554508 ZNF407Q9C0G0 2248 aa8.12□□□□□ -1.11
ACTN1-213ENST00000554508 UTP20O75691 2785 aaKnown RBP8.12□□□□□ -1.11
ACTN1-213ENST00000554508 FREM3P0C091 2139 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 MAST4O15021 2626 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 NCOA6Q14686 2063 aaPredicted RBP8.11□□□□□ -1.11
ACTN1-213ENST00000554508 UQCRHLA0A096LP55 91 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 TRGV8A0A0C4DH27 118 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 A0A1W2PPM1 405 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 A1L4Q6 167 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 TMEM200CA6NKL6 621 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 A8MVJ9 347 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 FOXO6A8MYZ6 492 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 C17orf105B2RV13 164 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 PROM1O43490 865 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 ASNA1O43681 348 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 SEMA3DO95025 777 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 GPR75O95800 540 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 CLDN1O95832 211 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 PYGBP11216 843 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 TAC1P20366 129 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 ARL1P40616 181 aaPredicted RBP8.11□□□□□ -1.11
ACTN1-213ENST00000554508 CA7P43166 264 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 ST13P50502 369 aaKnown RBP8.11□□□□□ -1.11
ACTN1-213ENST00000554508 CASP6P55212 293 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 HNRNPH2P55795 449 aaKnown RBP8.11□□□□□ -1.11
ACTN1-213ENST00000554508 RNF4P78317 190 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 TNFRSF17Q02223 184 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 ZNF844Q08AG5 666 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 IFT88Q13099 833 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 RASA2Q15283 850 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 CEP85LQ5SZL2 805 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 C1QL3Q5VWW1 255 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 FRG2Q64ET8 278 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 TTC19Q6DKK2 380 aaPredicted RBP8.11□□□□□ -1.11
ACTN1-213ENST00000554508 MRM1Q6IN84 353 aaKnown RBP8.11□□□□□ -1.11
ACTN1-213ENST00000554508 BNC2Q6ZN30 1099 aaPredicted RBP8.11□□□□□ -1.11
ACTN1-213ENST00000554508 MILR1Q7Z6M3 343 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 FJX1Q86VR8 437 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 NUDT13Q86X67 352 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 RIBC1Q8N443 379 aaPredicted RBP8.11□□□□□ -1.11
ACTN1-213ENST00000554508 RNF175Q8N4F7 328 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 TMEM151AQ8N4L1 468 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 SLC2A12Q8TD20 617 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 MTFMTQ96DP5 389 aaKnown RBP8.11□□□□□ -1.11
ACTN1-213ENST00000554508 DGAT2Q96PD7 388 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 FRG2BQ96QU4 278 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 PELOQ9BRX2 385 aaKnown RBP8.11□□□□□ -1.11
ACTN1-213ENST00000554508 SORBS1Q9BX66 1292 aaKnown RBP8.11□□□□□ -1.11
ACTN1-213ENST00000554508 C1QTNF3Q9BXJ4 246 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 ZNF717Q9BY31 904 aaPredicted RBP8.11□□□□□ -1.11
ACTN1-213ENST00000554508 OR8D2Q9GZM6 311 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 WDR41Q9HAD4 459 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 ZBTB26Q9HCK0 441 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 TIMMDC1Q9NPL8 285 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 HPF1Q9NWY4 346 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 MYOTQ9UBF9 498 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 COPS7AQ9UBW8 275 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 ADAM29Q9UKF5 820 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 ERVK-11Q9UQG0 969 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 ZNF835Q9Y2P0 537 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 ATG4BQ9Y4P1 393 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 ASB4Q9Y574 426 aa8.11□□□□□ -1.11
ACTN1-213ENST00000554508 A0A0A6YYD5 115 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 MYOCOSA0A1B0GUC4 107 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 A8MT66 165 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 NPIPA5E9PKD4 350 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 CCL21O00585 134 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 RGS16O15492 202 aaPredicted RBP8.1□□□□□ -1.11
ACTN1-213ENST00000554508 PEX1O43933 1283 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 FGF17O60258 216 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 PRKNO60260 465 aaPredicted RBP8.1□□□□□ -1.11
ACTN1-213ENST00000554508 SLC19A2O60779 497 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 OR2J2O76002 312 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 ETHE1O95571 254 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 OTCP00480 354 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 RPS17P08708 135 aaKnown RBP8.1□□□□□ -1.11
ACTN1-213ENST00000554508 SBK3P0C264 359 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 FAM58BPP0C7Q3 252 aa8.1□□□□□ -1.11
ACTN1-213ENST00000554508 ALOX15P16050 662 aaPredicted RBP8.1□□□□□ -1.11
ACTN1-213ENST00000554508 ZNF24P17028 368 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms