RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 UBAP2LQ14157 1087 aaKnown RBP12.2□□□□□ -0.46
SHMT2-211ENST00000554310 NR6A1Q15406 480 aa12.2□□□□□ -0.46
SHMT2-211ENST00000554310 TUBA3EQ6PEY2 450 aa12.2□□□□□ -0.46
SHMT2-211ENST00000554310 CLNKQ7Z7G1 428 aa12.2□□□□□ -0.46
SHMT2-211ENST00000554310 RPS19BP1Q86WX3 136 aaKnown RBP12.2□□□□□ -0.46
SHMT2-211ENST00000554310 ARMC10Q8N2F6 343 aa12.2□□□□□ -0.46
SHMT2-211ENST00000554310 TMEM132CQ8N3T6 1108 aa12.2□□□□□ -0.46
SHMT2-211ENST00000554310 KIF2BQ8N4N8 673 aa12.2□□□□□ -0.46
SHMT2-211ENST00000554310 APCDD1LQ8NCL9 501 aa12.2□□□□□ -0.46
SHMT2-211ENST00000554310 OR4F6Q8NGB9 312 aa12.2□□□□□ -0.46
SHMT2-211ENST00000554310 TCP10LQ8TDR4 215 aa12.2□□□□□ -0.46
SHMT2-211ENST00000554310 FAR1Q8WVX9 515 aa12.2□□□□□ -0.46
SHMT2-211ENST00000554310 DAZLQ92904 295 aaKnown RBP12.2□□□□□ -0.46
SHMT2-211ENST00000554310 VMP1Q96GC9 406 aa12.2□□□□□ -0.46
SHMT2-211ENST00000554310 SERPINI1Q99574 410 aa12.2□□□□□ -0.46
SHMT2-211ENST00000554310 NPAS2Q99743 824 aa12.2□□□□□ -0.46
SHMT2-211ENST00000554310 ELAC2Q9BQ52 826 aaKnown RBP12.2□□□□□ -0.46
SHMT2-211ENST00000554310 ZNF717Q9BY31 904 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-211ENST00000554310 DEFB126Q9BYW3 111 aa12.2□□□□□ -0.46
SHMT2-211ENST00000554310 ELOVL6Q9H5J4 265 aa12.2□□□□□ -0.46
SHMT2-211ENST00000554310 PNO1Q9NRX1 252 aaKnown RBP12.2□□□□□ -0.46
SHMT2-211ENST00000554310 FGFR1OP2Q9NVK5 253 aa12.2□□□□□ -0.46
SHMT2-211ENST00000554310 LYARQ9NX58 379 aaKnown RBP12.2□□□□□ -0.46
SHMT2-211ENST00000554310 TRPS1Q9UHF7 1281 aa12.2□□□□□ -0.46
SHMT2-211ENST00000554310 DCDC2Q9UHG0 476 aa12.2□□□□□ -0.46
SHMT2-211ENST00000554310 FBXW2Q9UKT8 454 aa12.2□□□□□ -0.46
SHMT2-211ENST00000554310 STK38LQ9Y2H1 464 aa12.2□□□□□ -0.46
SHMT2-211ENST00000554310 PCDHGB6Q9Y5F9 930 aa12.2□□□□□ -0.46
SHMT2-211ENST00000554310 A0A0A6YYD5 115 aa12.19□□□□□ -0.46
SHMT2-211ENST00000554310 TRBV11-1A0A0K0K1C0 115 aa12.19□□□□□ -0.46
SHMT2-211ENST00000554310 ANKUB1A6NFN9 424 aa12.19□□□□□ -0.46
SHMT2-211ENST00000554310 A8MUA0 341 aa12.19□□□□□ -0.46
SHMT2-211ENST00000554310 GOLGA8RI6L899 631 aa12.19□□□□□ -0.46
SHMT2-211ENST00000554310 GLRA3O75311 464 aa12.19□□□□□ -0.46
SHMT2-211ENST00000554310 CBX6O95503 412 aa12.19□□□□□ -0.46
SHMT2-211ENST00000554310 ETHE1O95571 254 aa12.19□□□□□ -0.46
SHMT2-211ENST00000554310 DHRS4L1P0CG22 281 aa12.19□□□□□ -0.46
SHMT2-211ENST00000554310 PYGBP11216 843 aa12.19□□□□□ -0.46
SHMT2-211ENST00000554310 TLX1P31314 330 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-211ENST00000554310 BSGP35613 385 aa12.19□□□□□ -0.46
SHMT2-211ENST00000554310 BUD31P41223 144 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-211ENST00000554310 NEK2P51955 445 aa12.19□□□□□ -0.46
SHMT2-211ENST00000554310 IGLV3-21P80748 117 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-211ENST00000554310 CLCQ05315 142 aa12.19□□□□□ -0.46
SHMT2-211ENST00000554310 SLAMF1Q13291 335 aa12.19□□□□□ -0.46
SHMT2-211ENST00000554310 MRPL49Q13405 166 aaKnown RBP12.19□□□□□ -0.46
SHMT2-211ENST00000554310 ELOAQ14241 798 aaKnown RBP12.19□□□□□ -0.46
SHMT2-211ENST00000554310 OR1C1Q15619 314 aa12.19□□□□□ -0.46
SHMT2-211ENST00000554310 ZNF766Q5HY98 468 aa12.19□□□□□ -0.46
SHMT2-211ENST00000554310 FHL5Q5TD97 284 aa12.19□□□□□ -0.46
SHMT2-211ENST00000554310 MILR1Q7Z6M3 343 aa12.19□□□□□ -0.46
SHMT2-211ENST00000554310 GPR180Q86V85 440 aa12.19□□□□□ -0.46
SHMT2-211ENST00000554310 SLC22A9Q8IVM8 553 aa12.19□□□□□ -0.46
SHMT2-211ENST00000554310 HORMAD2Q8N7B1 307 aa12.19□□□□□ -0.46
SHMT2-211ENST00000554310 ST6GALNAC3Q8NDV1 305 aa12.19□□□□□ -0.46
SHMT2-211ENST00000554310 MDS2Q8NDY4 140 aa12.19□□□□□ -0.46
SHMT2-211ENST00000554310 OR14A16Q8NHC5 309 aa12.19□□□□□ -0.46
SHMT2-211ENST00000554310 LRRC8CQ8TDW0 803 aa12.19□□□□□ -0.46
SHMT2-211ENST00000554310 C5orf34Q96MH7 638 aa12.19□□□□□ -0.46
SHMT2-211ENST00000554310 TMEM237Q96Q45 408 aa12.19□□□□□ -0.46
SHMT2-211ENST00000554310 PAIP2Q9BPZ3 127 aaKnown RBP12.19□□□□□ -0.46
SHMT2-211ENST00000554310 SLX1AQ9BQ83 275 aa12.19□□□□□ -0.46
SHMT2-211ENST00000554310 SORBS1Q9BX66 1292 aaKnown RBP12.19□□□□□ -0.46
SHMT2-211ENST00000554310 DDX31Q9H8H2 851 aaKnown RBP12.19□□□□□ -0.46
SHMT2-211ENST00000554310 OLAHQ9NV23 265 aa12.19□□□□□ -0.46
SHMT2-211ENST00000554310 VTI1BQ9UEU0 232 aa12.19□□□□□ -0.46
SHMT2-211ENST00000554310 GRID1Q9ULK0 1009 aa12.19□□□□□ -0.46
SHMT2-211ENST00000554310 CLCA3PQ9Y6N3 262 aa12.19□□□□□ -0.46
SHMT2-211ENST00000554310 CCT8L1PA6NM43 557 aa12.18□□□□□ -0.46
SHMT2-211ENST00000554310 FCHO1O14526 889 aa12.18□□□□□ -0.46
SHMT2-211ENST00000554310 COPEO14579 308 aa12.18□□□□□ -0.46
SHMT2-211ENST00000554310 MAN1A2O60476 641 aa12.18□□□□□ -0.46
SHMT2-211ENST00000554310 DLX3O60479 287 aa12.18□□□□□ -0.46
SHMT2-211ENST00000554310 LDB3O75112 727 aa12.18□□□□□ -0.46
SHMT2-211ENST00000554310 IFNA16P05015 189 aa12.18□□□□□ -0.46
SHMT2-211ENST00000554310 EDN3P14138 238 aa12.18□□□□□ -0.46
SHMT2-211ENST00000554310 COX7A2P14406 83 aa12.18□□□□□ -0.46
SHMT2-211ENST00000554310 TPP2P29144 1249 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-211ENST00000554310 TRHRP34981 398 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-211ENST00000554310 ETV4P43268 484 aa12.18□□□□□ -0.46
SHMT2-211ENST00000554310 PRKAA2P54646 552 aa12.18□□□□□ -0.46
SHMT2-211ENST00000554310 CDH13P55290 713 aa12.18□□□□□ -0.46
SHMT2-211ENST00000554310 MLF1P58340 268 aa12.18□□□□□ -0.46
SHMT2-211ENST00000554310 OC90Q02509 493 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-211ENST00000554310 BIKQ13323 160 aa12.18□□□□□ -0.46
SHMT2-211ENST00000554310 ZNF678Q5SXM1 525 aa12.18□□□□□ -0.46
SHMT2-211ENST00000554310 LETMD1Q6P1Q0 360 aa12.18□□□□□ -0.46
SHMT2-211ENST00000554310 CYP20A1Q6UW02 462 aa12.18□□□□□ -0.46
SHMT2-211ENST00000554310 CCDC121Q6ZUS5 278 aa12.18□□□□□ -0.46
SHMT2-211ENST00000554310 SPATA21Q7Z572 469 aa12.18□□□□□ -0.46
SHMT2-211ENST00000554310 TMEM178AQ8NBL3 297 aa12.18□□□□□ -0.46
SHMT2-211ENST00000554310 MORN4Q8NDC4 146 aa12.18□□□□□ -0.46
SHMT2-211ENST00000554310 NCLNQ969V3 563 aa12.18□□□□□ -0.46
SHMT2-211ENST00000554310 CCDC126Q96EE4 140 aa12.18□□□□□ -0.46
SHMT2-211ENST00000554310 L3HYPDHQ96EM0 354 aa12.18□□□□□ -0.46
SHMT2-211ENST00000554310 SCMH1Q96GD3 660 aa12.18□□□□□ -0.46
SHMT2-211ENST00000554310 TAAR6Q96RI8 345 aa12.18□□□□□ -0.46
SHMT2-211ENST00000554310 ZNF382Q96SR6 550 aa12.18□□□□□ -0.46
SHMT2-211ENST00000554310 ALOXE3Q9BYJ1 711 aa12.18□□□□□ -0.46
SHMT2-211ENST00000554310 CDCP1Q9H5V8 836 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms