RNA–Protein interactions for RNA: ENST00000554064.5

FCF1-205, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-205ENST00000554064 PARP10Q53GL7 1025 aa2.7□□□□□ -1.98
FCF1-205ENST00000554064 ZNF506Q5JVG8 444 aa2.7□□□□□ -1.98
FCF1-205ENST00000554064 CST9LP1Q5W188 147 aa2.7□□□□□ -1.98
FCF1-205ENST00000554064 MOXD1Q6UVY6 613 aa2.7□□□□□ -1.98
FCF1-205ENST00000554064 CLEC4GQ6UXB4 293 aa2.7□□□□□ -1.98
FCF1-205ENST00000554064 Q6ZVH6 145 aa2.7□□□□□ -1.98
FCF1-205ENST00000554064 Q6ZVQ6 151 aa2.7□□□□□ -1.98
FCF1-205ENST00000554064 RUFY3Q7L099 469 aa2.7□□□□□ -1.98
FCF1-205ENST00000554064 TRMT11Q7Z4G4 463 aaKnown RBP2.7□□□□□ -1.98
FCF1-205ENST00000554064 NRARPQ7Z6K4 114 aa2.7□□□□□ -1.98
FCF1-205ENST00000554064 HIPK1Q86Z02 1210 aa2.7□□□□□ -1.98
FCF1-205ENST00000554064 CROCCP3Q8IVE0 287 aa2.7□□□□□ -1.98
FCF1-205ENST00000554064 GRK7Q8WTQ7 553 aa2.7□□□□□ -1.98
FCF1-205ENST00000554064 EXT2Q93063 718 aa2.7□□□□□ -1.98
FCF1-205ENST00000554064 PGAP3Q96FM1 320 aaPredicted RBP2.7□□□□□ -1.98
FCF1-205ENST00000554064 RADILQ96JH8 1075 aa2.7□□□□□ -1.98
FCF1-205ENST00000554064 CFAP57Q96MR6 1250 aa2.7□□□□□ -1.98
FCF1-205ENST00000554064 JAKMIP1Q96N16 626 aaKnown RBP2.7□□□□□ -1.98
FCF1-205ENST00000554064 LINC00167Q96N53 147 aa2.7□□□□□ -1.98
FCF1-205ENST00000554064 UTP14AQ9BVJ6 771 aaKnown RBP2.7□□□□□ -1.98
FCF1-205ENST00000554064 SP140LQ9H930 580 aa2.7□□□□□ -1.98
FCF1-205ENST00000554064 RPF1Q9H9Y2 349 aaKnown RBP2.7□□□□□ -1.98
FCF1-205ENST00000554064 WDR41Q9HAD4 459 aa2.7□□□□□ -1.98
FCF1-205ENST00000554064 HMG20BQ9P0W2 317 aa2.7□□□□□ -1.98
FCF1-205ENST00000554064 BCCIPQ9P287 314 aaKnown RBP eCLIP2.7□□□□□ -1.98
FCF1-205ENST00000554064 WDR35Q9P2L0 1181 aa2.7□□□□□ -1.98
FCF1-205ENST00000554064 GTF3C4Q9UKN8 822 aa2.7□□□□□ -1.98
FCF1-205ENST00000554064 ZNF346Q9UL40 294 aaKnown RBP2.7□□□□□ -1.98
FCF1-205ENST00000554064 AGTPBP1Q9UPW5 1226 aa2.7□□□□□ -1.98
FCF1-205ENST00000554064 SATB2Q9UPW6 733 aa2.7□□□□□ -1.98
FCF1-205ENST00000554064 LTBP4Q8N2S1 1624 aa2.7□□□□□ -1.98
FCF1-205ENST00000554064 PHLPP1O60346 1717 aa2.7□□□□□ -1.98
FCF1-205ENST00000554064 ABCA3Q99758 1704 aa2.7□□□□□ -1.98
FCF1-205ENST00000554064 RALGAPA1Q6GYQ0 2036 aa2.69□□□□□ -1.98
FCF1-205ENST00000554064 CCDC171Q6TFL3 1326 aa2.69□□□□□ -1.98
FCF1-205ENST00000554064 MROH5Q6ZUA9 1318 aa2.69□□□□□ -1.98
FCF1-205ENST00000554064 SH3TC1Q8TE82 1336 aa2.69□□□□□ -1.98
FCF1-205ENST00000554064 LAMB4A4D0S4 1761 aa2.69□□□□□ -1.98
FCF1-205ENST00000554064 DISP2A7MBM2 1401 aa2.69□□□□□ -1.98
FCF1-205ENST00000554064 LRP6O75581 1613 aa2.69□□□□□ -1.98
FCF1-205ENST00000554064 PAPPAQ13219 1627 aa2.69□□□□□ -1.98
FCF1-205ENST00000554064 SYNDIG1LA6NDD5 238 aa2.69□□□□□ -1.98
FCF1-205ENST00000554064 K7ENM7 598 aa2.69□□□□□ -1.98
FCF1-205ENST00000554064 MT-ND2P03891 347 aa2.69□□□□□ -1.98
FCF1-205ENST00000554064 UQCRFS1P1P0C7P4 283 aa2.69□□□□□ -1.98
FCF1-205ENST00000554064 CASTP20810 708 aaKnown RBP2.69□□□□□ -1.98
FCF1-205ENST00000554064 CASP2P42575 452 aa2.69□□□□□ -1.98
FCF1-205ENST00000554064 CRYBA2P53672 197 aa2.69□□□□□ -1.98
FCF1-205ENST00000554064 PPIAP62937 165 aaKnown RBP2.69□□□□□ -1.98
FCF1-205ENST00000554064 IL10RBQ08334 325 aa2.69□□□□□ -1.98
FCF1-205ENST00000554064 GRB14Q14449 540 aa2.69□□□□□ -1.98
FCF1-205ENST00000554064 ECSCRQ19T08 205 aa2.69□□□□□ -1.98
FCF1-205ENST00000554064 LRRC37A5PQ49AS3 106 aa2.69□□□□□ -1.98
FCF1-205ENST00000554064 CCDC152Q4G0S7 254 aa2.69□□□□□ -1.98
FCF1-205ENST00000554064 ZNF542PQ5EBM4 170 aa2.69□□□□□ -1.98
FCF1-205ENST00000554064 NHLRC3Q5JS37 347 aa2.69□□□□□ -1.98
FCF1-205ENST00000554064 LRRC73Q5JTD7 316 aa2.69□□□□□ -1.98
FCF1-205ENST00000554064 SLC10A5Q5PT55 438 aa2.69□□□□□ -1.98
FCF1-205ENST00000554064 MUC21Q5SSG8 566 aa2.69□□□□□ -1.98
FCF1-205ENST00000554064 BLOC1S2Q6QNY1 142 aa2.69□□□□□ -1.98
FCF1-205ENST00000554064 ZC3H3Q8IXZ2 948 aaKnown RBP2.69□□□□□ -1.98
FCF1-205ENST00000554064 B3GALT6Q96L58 329 aa2.69□□□□□ -1.98
FCF1-205ENST00000554064 TNFRSF13CQ96RJ3 184 aa2.69□□□□□ -1.98
FCF1-205ENST00000554064 PCDHB18PQ96TA0 734 aa2.69□□□□□ -1.98
FCF1-205ENST00000554064 MGME1Q9BQP7 344 aa2.69□□□□□ -1.98
FCF1-205ENST00000554064 YTHDF1Q9BYJ9 559 aaKnown RBP2.69□□□□□ -1.98
FCF1-205ENST00000554064 UPF3BQ9BZI7 483 aaKnown RBP2.69□□□□□ -1.98
FCF1-205ENST00000554064 SLC39A8Q9C0K1 460 aa2.69□□□□□ -1.98
FCF1-205ENST00000554064 DPEP2Q9H4A9 486 aa2.69□□□□□ -1.98
FCF1-205ENST00000554064 IARS2Q9NSE4 1012 aaKnown RBP2.69□□□□□ -1.98
FCF1-205ENST00000554064 DEPPQ9NTK1 212 aa2.69□□□□□ -1.98
FCF1-205ENST00000554064 SMC3Q9UQE7 1217 aa2.69□□□□□ -1.98
FCF1-205ENST00000554064 NIP7Q9Y221 180 aaKnown RBP eCLIP2.69□□□□□ -1.98
FCF1-205ENST00000554064 ATP6V1DQ9Y5K8 247 aa2.69□□□□□ -1.98
FCF1-205ENST00000554064 JCADQ9P266 1359 aa2.69□□□□□ -1.98
FCF1-205ENST00000554064 UBR2Q8IWV8 1755 aa2.69□□□□□ -1.98
FCF1-205ENST00000554064 ARFGEF2Q9Y6D5 1785 aa2.69□□□□□ -1.98
FCF1-205ENST00000554064 ATRXP46100 2492 aa2.68□□□□□ -1.98
FCF1-205ENST00000554064 SLIT2O94813 1529 aa2.68□□□□□ -1.98
FCF1-205ENST00000554064 AFDNP55196 1824 aaKnown RBP2.68□□□□□ -1.98
FCF1-205ENST00000554064 A0A0D9SFI3 127 aa2.68□□□□□ -1.98
FCF1-205ENST00000554064 FAM168BA1KXE4 195 aa2.68□□□□□ -1.98
FCF1-205ENST00000554064 TMEM150CB9EJG8 249 aa2.68□□□□□ -1.98
FCF1-205ENST00000554064 LETM1O95202 739 aaPredicted RBP2.68□□□□□ -1.98
FCF1-205ENST00000554064 VENTXO95231 258 aa2.68□□□□□ -1.98
FCF1-205ENST00000554064 HSPD1P10809 573 aaKnown RBP2.68□□□□□ -1.98
FCF1-205ENST00000554064 ZBTB25P24278 435 aa2.68□□□□□ -1.98
FCF1-205ENST00000554064 SSTR1P30872 391 aa2.68□□□□□ -1.98
FCF1-205ENST00000554064 RFC4P35249 363 aa2.68□□□□□ -1.98
FCF1-205ENST00000554064 RPL34P49207 117 aaKnown RBP2.68□□□□□ -1.98
FCF1-205ENST00000554064 RGS7P49802 495 aa2.68□□□□□ -1.98
FCF1-205ENST00000554064 CYLC2Q14093 348 aaPredicted RBP2.68□□□□□ -1.98
FCF1-205ENST00000554064 IMMTQ16891 758 aaKnown RBP2.68□□□□□ -1.98
FCF1-205ENST00000554064 POM121L1PQ3SYA9 428 aa2.68□□□□□ -1.98
FCF1-205ENST00000554064 CAVIN4Q5BKX8 364 aa2.68□□□□□ -1.98
FCF1-205ENST00000554064 KRT80Q6KB66 452 aa2.68□□□□□ -1.98
FCF1-205ENST00000554064 COX8CQ7Z4L0 72 aa2.68□□□□□ -1.98
FCF1-205ENST00000554064 LRRC49Q8IUZ0 686 aa2.68□□□□□ -1.98
FCF1-205ENST00000554064 FAM219AQ8IW50 185 aa2.68□□□□□ -1.98
FCF1-205ENST00000554064 PARP8Q8N3A8 854 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms