RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.66□□□□□ -0.226e-6■■□□□ 12.1
SHMT2-210ENST00000553950 GID8Q9NWU2 228 aa13.66□□□□□ -0.22
SHMT2-210ENST00000553950 BTNL2Q9UIR0 455 aa13.66□□□□□ -0.22
SHMT2-210ENST00000553950 C15orf38-AP3S2A0A0A6YYH1 394 aa13.65□□□□□ -0.22
SHMT2-210ENST00000553950 PRSS51A0A1B0GVH4 220 aa13.65□□□□□ -0.22
SHMT2-210ENST00000553950 GABRR3A8MPY1 467 aa13.65□□□□□ -0.22
SHMT2-210ENST00000553950 C9orf172C9J069 976 aa13.65□□□□□ -0.22
SHMT2-210ENST00000553950 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.65□□□□□ -0.22
SHMT2-210ENST00000553950 MRASO14807 208 aa13.65□□□□□ -0.22
SHMT2-210ENST00000553950 DYRK3O43781 588 aa13.65□□□□□ -0.22
SHMT2-210ENST00000553950 CTNSO60931 367 aa13.65□□□□□ -0.22
SHMT2-210ENST00000553950 ERAL1O75616 437 aaKnown RBP13.65□□□□□ -0.22
SHMT2-210ENST00000553950 UBOX5O94941 541 aa13.65□□□□□ -0.22
SHMT2-210ENST00000553950 KCNH1O95259 989 aa13.65□□□□□ -0.22
SHMT2-210ENST00000553950 GPR75O95800 540 aa13.65□□□□□ -0.22
SHMT2-210ENST00000553950 CAPN3P20807 821 aa13.65□□□□□ -0.22
SHMT2-210ENST00000553950 FRKP42685 505 aaPredicted RBP13.65□□□□□ -0.22
SHMT2-210ENST00000553950 SNRPNP63162 240 aaKnown RBP13.65□□□□□ -0.22
SHMT2-210ENST00000553950 MAT1AQ00266 395 aaKnown RBP13.65□□□□□ -0.22
SHMT2-210ENST00000553950 MC1RQ01726 317 aa13.65□□□□□ -0.22
SHMT2-210ENST00000553950 STX4Q12846 297 aa13.65□□□□□ -0.22
SHMT2-210ENST00000553950 CEBPEQ15744 281 aa13.65□□□□□ -0.22
SHMT2-210ENST00000553950 MFSD4BQ5TF39 518 aa13.65□□□□□ -0.22
SHMT2-210ENST00000553950 REP15Q6BDI9 236 aa13.65□□□□□ -0.22
SHMT2-210ENST00000553950 ZNF517Q6ZMY9 492 aaPredicted RBP13.65□□□□□ -0.22
SHMT2-210ENST00000553950 COX15Q7KZN9 410 aa13.65□□□□□ -0.22
SHMT2-210ENST00000553950 ARPINQ7Z6K5 226 aa13.65□□□□□ -0.22
SHMT2-210ENST00000553950 YTHDF3Q7Z739 585 aaKnown RBP13.65□□□□□ -0.22
SHMT2-210ENST00000553950 OR5P2Q8WZ92 322 aa13.65□□□□□ -0.22
SHMT2-210ENST00000553950 MIEF2Q96C03 454 aa13.65□□□□□ -0.22
SHMT2-210ENST00000553950 SEMA3GQ9NS98 782 aa13.65□□□□□ -0.22
SHMT2-210ENST00000553950 ACSL6Q9UKU0 697 aa13.65□□□□□ -0.22
SHMT2-210ENST00000553950 PADI1Q9ULC6 663 aa13.65□□□□□ -0.22
SHMT2-210ENST00000553950 EXO1Q9UQ84 846 aaKnown RBP13.65□□□□□ -0.22
SHMT2-210ENST00000553950 MAN2B2Q9Y2E5 1009 aa13.65□□□□□ -0.22
SHMT2-210ENST00000553950 PIEZO1Q92508 2521 aa13.65□□□□□ -0.22
SHMT2-210ENST00000553950 A0A1W2PRB8 838 aa13.64□□□□□ -0.23
SHMT2-210ENST00000553950 DCDC2BA2VCK2 349 aa13.64□□□□□ -0.23
SHMT2-210ENST00000553950 C21orf140B9A014 251 aa13.64□□□□□ -0.23
SHMT2-210ENST00000553950 RFXANKO14593 260 aa13.64□□□□□ -0.23
SHMT2-210ENST00000553950 ERN1O75460 977 aaKnown RBP13.64□□□□□ -0.23
SHMT2-210ENST00000553950 UNC5CO95185 931 aa13.64□□□□□ -0.23
SHMT2-210ENST00000553950 RAB40ALP0C0E4 278 aa13.64□□□□□ -0.23
SHMT2-210ENST00000553950 LAMP1P11279 417 aa13.64□□□□□ -0.23
SHMT2-210ENST00000553950 ZNF28P17035 718 aa13.64□□□□□ -0.23
SHMT2-210ENST00000553950 ZFP36L2P47974 494 aaKnown RBP13.64□□□□□ -0.23
SHMT2-210ENST00000553950 TRPC1P48995 793 aa13.64□□□□□ -0.23
SHMT2-210ENST00000553950 NUDT2P50583 147 aa13.64□□□□□ -0.23
SHMT2-210ENST00000553950 MXRA7P84157 204 aa13.64□□□□□ -0.23
SHMT2-210ENST00000553950 FOLH1Q04609 750 aa13.64□□□□□ -0.23
SHMT2-210ENST00000553950 ART3Q13508 389 aa13.64□□□□□ -0.23
SHMT2-210ENST00000553950 NCF4Q15080 339 aa13.64□□□□□ -0.23
SHMT2-210ENST00000553950 ZSCAN26Q16670 478 aa13.64□□□□□ -0.23
SHMT2-210ENST00000553950 TRMT5Q32P41 509 aaKnown RBP13.64□□□□□ -0.23
SHMT2-210ENST00000553950 MINDY4Q4G0A6 757 aa13.64□□□□□ -0.23
SHMT2-210ENST00000553950 VPS26BQ4G0F5 336 aa13.64□□□□□ -0.23
SHMT2-210ENST00000553950 C6orf10Q5SRN2 563 aa13.64□□□□□ -0.23
SHMT2-210ENST00000553950 OR4F3Q6IEY1 312 aa13.64□□□□□ -0.23
SHMT2-210ENST00000553950 FAM198BQ6UWH4 519 aa13.64□□□□□ -0.23
SHMT2-210ENST00000553950 C16orf89Q6UX73 402 aa13.64□□□□□ -0.23
SHMT2-210ENST00000553950 HACD2Q6Y1H2 254 aa13.64□□□□□ -0.23
SHMT2-210ENST00000553950 SCUBE1Q8IWY4 988 aa13.64□□□□□ -0.23
SHMT2-210ENST00000553950 NLGN4XQ8N0W4 816 aa13.64□□□□□ -0.23
SHMT2-210ENST00000553950 DPP10Q8N608 796 aa13.64□□□□□ -0.23
SHMT2-210ENST00000553950 SLC38A9Q8NBW4 561 aa13.64□□□□□ -0.23
SHMT2-210ENST00000553950 GALNT6Q8NCL4 622 aa13.64□□□□□ -0.23
SHMT2-210ENST00000553950 NLGN4YQ8NFZ3 816 aaPredicted RBP13.64□□□□□ -0.23
SHMT2-210ENST00000553950 STT3BQ8TCJ2 826 aa13.64□□□□□ -0.23
SHMT2-210ENST00000553950 MOAP1Q96BY2 351 aa13.64□□□□□ -0.23
SHMT2-210ENST00000553950 VPS50Q96JG6 964 aa13.64□□□□□ -0.23
SHMT2-210ENST00000553950 CCDC115Q96NT0 180 aa13.64□□□□□ -0.23
SHMT2-210ENST00000553950 SLC46A1Q96NT5 459 aa13.64□□□□□ -0.23
SHMT2-210ENST00000553950 RBCK1Q9BYM8 510 aa13.64□□□□□ -0.23
SHMT2-210ENST00000553950 ARL8BQ9NVJ2 186 aa13.64□□□□□ -0.23
SHMT2-210ENST00000553950 CTSFQ9UBX1 484 aa13.64□□□□□ -0.23
SHMT2-210ENST00000553950 C19orf25Q9UFG5 118 aaPredicted RBP13.64□□□□□ -0.23
SHMT2-210ENST00000553950 CES1P1Q9UKY3 287 aa13.64□□□□□ -0.23
SHMT2-210ENST00000553950 A0A096LPI6 279 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 LOC100653049A0A140TA62 436 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 A0A1W2PNU3 283 aaPredicted RBP13.63□□□□□ -0.23
SHMT2-210ENST00000553950 FAM149AA5PLN7 773 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 GLOD5A6NK44 160 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 VSTM2BA6NLU5 285 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 CDRT15L2A8MXV6 281 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 MYO1GB0I1T2 1018 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 C9JVG2 144 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 OR10H2O60403 315 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 B4GALT2O60909 372 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 KRT34O76011 436 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 CBX6O95503 412 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 ANP32DO95626 131 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 IGHEP01854 428 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 ATP1B1P05026 303 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 KRT16P08779 473 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 ZGLP1P0C6A0 271 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 CPMP14384 443 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 PORP16435 677 aaPredicted RBP13.63□□□□□ -0.23
SHMT2-210ENST00000553950 PPIBP23284 216 aaKnown RBP13.63□□□□□ -0.23
SHMT2-210ENST00000553950 GALNSP34059 522 aa13.63□□□□□ -0.23
SHMT2-210ENST00000553950 NCBP2P52298 156 aaKnown RBP eCLIP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms