RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 PCDHGA11Q9Y5H2 935 aa15.15■□□□□ 0.02
ACTN1-209ENST00000553659 UNC79Q9P2D8 2635 aa15.15■□□□□ 0.02
ACTN1-209ENST00000553659 CASQ2O14958 399 aaPredicted RBP15.14■□□□□ 0.01
ACTN1-209ENST00000553659 ANKRD28O15084 1053 aa15.14■□□□□ 0.01
ACTN1-209ENST00000553659 HCRTR1O43613 425 aa15.14■□□□□ 0.01
ACTN1-209ENST00000553659 PDYNP01213 254 aa15.14■□□□□ 0.01
ACTN1-209ENST00000553659 C8BP07358 591 aa15.14■□□□□ 0.01
ACTN1-209ENST00000553659 UGT2B7P16662 529 aa15.14■□□□□ 0.01
ACTN1-209ENST00000553659 COL8A1P27658 744 aa15.14■□□□□ 0.01
ACTN1-209ENST00000553659 BDKRB1P46663 353 aa15.14■□□□□ 0.01
ACTN1-209ENST00000553659 HNRNPFP52597 415 aaKnown RBP15.14■□□□□ 0.01
ACTN1-209ENST00000553659 SOX8P57073 446 aa15.14■□□□□ 0.01
ACTN1-209ENST00000553659 NAE1Q13564 534 aa15.14■□□□□ 0.01
ACTN1-209ENST00000553659 TLR1Q15399 786 aa15.14■□□□□ 0.01
ACTN1-209ENST00000553659 TAF11Q15544 211 aa15.14■□□□□ 0.01
ACTN1-209ENST00000553659 ZIC1Q15915 447 aa15.14■□□□□ 0.01
ACTN1-209ENST00000553659 DPY19L1Q2PZI1 675 aa15.14■□□□□ 0.01
ACTN1-209ENST00000553659 RFTN2Q52LD8 501 aaPredicted RBP15.14■□□□□ 0.01
ACTN1-209ENST00000553659 XKR6Q5GH73 641 aa15.14■□□□□ 0.01
ACTN1-209ENST00000553659 CRB2Q5IJ48 1285 aa15.14■□□□□ 0.01
ACTN1-209ENST00000553659 C1orf189Q5VU69 101 aa15.14■□□□□ 0.01
ACTN1-209ENST00000553659 ZNF787Q6DD87 383 aa15.14■□□□□ 0.01
ACTN1-209ENST00000553659 TLDC1Q6P9B6 456 aa15.14■□□□□ 0.01
ACTN1-209ENST00000553659 TRIM73Q86UV7 250 aa15.14■□□□□ 0.01
ACTN1-209ENST00000553659 DCUN1D3Q8IWE4 304 aa15.14■□□□□ 0.01
ACTN1-209ENST00000553659 ZADH2Q8N4Q0 377 aa15.14■□□□□ 0.01
ACTN1-209ENST00000553659 RAB42Q8N4Z0 105 aa15.14■□□□□ 0.01
ACTN1-209ENST00000553659 BHLHE22Q8NFJ8 381 aaPredicted RBP15.14■□□□□ 0.01
ACTN1-209ENST00000553659 OR5AR1Q8NGP9 310 aa15.14■□□□□ 0.01
ACTN1-209ENST00000553659 OR2Y1Q8NGV0 311 aa15.14■□□□□ 0.01
ACTN1-209ENST00000553659 PYDC1Q8WXC3 89 aa15.14■□□□□ 0.01
ACTN1-209ENST00000553659 TM9SF4Q92544 642 aa15.14■□□□□ 0.01
ACTN1-209ENST00000553659 POP5Q969H6 163 aaKnown RBP15.14■□□□□ 0.01
ACTN1-209ENST00000553659 UBE2E3Q969T4 207 aa15.14■□□□□ 0.01
ACTN1-209ENST00000553659 C5orf34Q96MH7 638 aa15.14■□□□□ 0.01
ACTN1-209ENST00000553659 SH3GL1Q99961 368 aa15.14■□□□□ 0.01
ACTN1-209ENST00000553659 EFCAB11Q9BUY7 163 aa15.14■□□□□ 0.01
ACTN1-209ENST00000553659 ACPTQ9BZG2 426 aa15.14■□□□□ 0.01
ACTN1-209ENST00000553659 ATG10Q9H0Y0 220 aa15.14■□□□□ 0.01
ACTN1-209ENST00000553659 P4HTMQ9NXG6 502 aa15.14■□□□□ 0.01
ACTN1-209ENST00000553659 IFT80Q9P2H3 777 aaPredicted RBP15.14■□□□□ 0.01
ACTN1-209ENST00000553659 NDOR1Q9UHB4 597 aa15.14■□□□□ 0.01
ACTN1-209ENST00000553659 CREBBPQ92793 2442 aa15.14■□□□□ 0.01
ACTN1-209ENST00000553659 PRRC2CQ9Y520 2896 aaKnown RBP15.14■□□□□ 0.01
ACTN1-209ENST00000553659 ZGRF1Q86YA3 2104 aa15.13■□□□□ 0.01
ACTN1-209ENST00000553659 ANKUB1A6NFN9 424 aa15.13■□□□□ 0.01
ACTN1-209ENST00000553659 AQP12BA6NM10 295 aa15.13■□□□□ 0.01
ACTN1-209ENST00000553659 ENO4A6NNW6 628 aa15.13■□□□□ 0.01
ACTN1-209ENST00000553659 ZSCAN9O15535 394 aaPredicted RBP15.13■□□□□ 0.01
ACTN1-209ENST00000553659 PEX1O43933 1283 aa15.13■□□□□ 0.01
ACTN1-209ENST00000553659 MYO1DO94832 1006 aa15.13■□□□□ 0.01
ACTN1-209ENST00000553659 CHRM5P08912 532 aaPredicted RBP15.13■□□□□ 0.01
ACTN1-209ENST00000553659 ATP6V1C1P21283 382 aa15.13■□□□□ 0.01
ACTN1-209ENST00000553659 SLC6A2P23975 617 aa15.13■□□□□ 0.01
ACTN1-209ENST00000553659 ACADLP28330 430 aa15.13■□□□□ 0.01
ACTN1-209ENST00000553659 DCTP40126 519 aa15.13■□□□□ 0.01
ACTN1-209ENST00000553659 ZFP36L2P47974 494 aaKnown RBP15.13■□□□□ 0.01
ACTN1-209ENST00000553659 PHEXP78562 749 aa15.13■□□□□ 0.01
ACTN1-209ENST00000553659 PWP1Q13610 501 aa15.13■□□□□ 0.01
ACTN1-209ENST00000553659 HIST2H2ACQ16777 129 aaPredicted RBP15.13■□□□□ 0.01
ACTN1-209ENST00000553659 DEFB110Q30KQ9 67 aa15.13■□□□□ 0.01
ACTN1-209ENST00000553659 TIGD2Q4W5G0 525 aa15.13■□□□□ 0.01
ACTN1-209ENST00000553659 HIST2H2AA3Q6FI13 130 aa15.13■□□□□ 0.01
ACTN1-209ENST00000553659 MRPL14Q6P1L8 145 aaKnown RBP15.13■□□□□ 0.01
ACTN1-209ENST00000553659 DHFR2Q86XF0 187 aa15.13■□□□□ 0.01
ACTN1-209ENST00000553659 AQP12AQ8IXF9 295 aa15.13■□□□□ 0.01
ACTN1-209ENST00000553659 TBC1D21Q8IYX1 336 aa15.13■□□□□ 0.01
ACTN1-209ENST00000553659 PQLC1Q8N2U9 271 aa15.13■□□□□ 0.01
ACTN1-209ENST00000553659 ZNF655Q8N720 491 aaPredicted RBP15.13■□□□□ 0.01
ACTN1-209ENST00000553659 FLVCR1-AS1Q8TAF5 88 aa15.13■□□□□ 0.01
ACTN1-209ENST00000553659 PYCR2Q96C36 320 aa15.13■□□□□ 0.01
ACTN1-209ENST00000553659 WDR34Q96EX3 536 aa15.13■□□□□ 0.01
ACTN1-209ENST00000553659 FCRL1Q96LA6 429 aa15.13■□□□□ 0.01
ACTN1-209ENST00000553659 BARD1Q99728 777 aaKnown RBP15.13■□□□□ 0.01
ACTN1-209ENST00000553659 HAUS8Q9BT25 410 aa15.13■□□□□ 0.01
ACTN1-209ENST00000553659 SGPP1Q9BX95 441 aa15.13■□□□□ 0.01
ACTN1-209ENST00000553659 ATP13A2Q9NQ11 1180 aa15.13■□□□□ 0.01
ACTN1-209ENST00000553659 SPHK1Q9NYA1 384 aa15.13■□□□□ 0.01
ACTN1-209ENST00000553659 OR6C2Q9NZP2 312 aa15.13■□□□□ 0.01
ACTN1-209ENST00000553659 SPATA7Q9P0W8 599 aa15.13■□□□□ 0.01
ACTN1-209ENST00000553659 DHCR7Q9UBM7 475 aaKnown RBP15.13■□□□□ 0.01
ACTN1-209ENST00000553659 SRPK3Q9UPE1 567 aa15.13■□□□□ 0.01
ACTN1-209ENST00000553659 ASF1AQ9Y294 204 aa15.13■□□□□ 0.01
ACTN1-209ENST00000553659 A0A0J9YY10 115 aa15.12■□□□□ 0.01
ACTN1-209ENST00000553659 PRORSD1PA6NEY8 169 aa15.12■□□□□ 0.01
ACTN1-209ENST00000553659 FXYD1O00168 92 aa15.12■□□□□ 0.01
ACTN1-209ENST00000553659 CNOT3O75175 753 aaKnown RBP15.12■□□□□ 0.01
ACTN1-209ENST00000553659 KCNH1O95259 989 aa15.12■□□□□ 0.01
ACTN1-209ENST00000553659 SLC16A8O95907 504 aa15.12■□□□□ 0.01
ACTN1-209ENST00000553659 CLDN8P56748 225 aa15.12■□□□□ 0.01
ACTN1-209ENST00000553659 HMGCS1Q01581 520 aa15.12■□□□□ 0.01
ACTN1-209ENST00000553659 ELOAQ14241 798 aaKnown RBP15.12■□□□□ 0.01
ACTN1-209ENST00000553659 ZXDCQ2QGD7 858 aaPredicted RBP15.12■□□□□ 0.01
ACTN1-209ENST00000553659 NKAIN1Q4KMZ8 207 aa15.12■□□□□ 0.01
ACTN1-209ENST00000553659 SGO1Q5FBB7 561 aa15.12■□□□□ 0.01
ACTN1-209ENST00000553659 Q6ZS92 163 aa15.12■□□□□ 0.01
ACTN1-209ENST00000553659 PPP1R32Q7Z5V6 425 aa15.12■□□□□ 0.01
ACTN1-209ENST00000553659 SPATA24Q86W54 205 aa15.12■□□□□ 0.01
ACTN1-209ENST00000553659 SLC15A3Q8IY34 581 aa15.12■□□□□ 0.01
ACTN1-209ENST00000553659 LIX1Q8N485 282 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms