RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 ACTR5Q9H9F9 607 aaPredicted RBP4.76□□□□□ -1.65
VTI1B-202ENST00000553619 COPS7BQ9H9Q2 264 aaPredicted RBP4.76□□□□□ -1.65
VTI1B-202ENST00000553619 WDR41Q9HAD4 459 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 IL21RQ9HBE5 538 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 SLC6A20Q9NP91 592 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 DMRT3Q9NQL9 472 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 SDR39U1Q9NRG7 319 aaPredicted RBP4.76□□□□□ -1.65
VTI1B-202ENST00000553619 FARSBQ9NSD9 589 aaKnown RBP4.76□□□□□ -1.65
VTI1B-202ENST00000553619 SEMA4GQ9NTN9 838 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 ATAD3AQ9NVI7 634 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.76□□□□□ -1.65
VTI1B-202ENST00000553619 AIG1Q9NVV5 245 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 GID8Q9NWU2 228 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 SOHLH2Q9NX45 425 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 MS4A12Q9NXJ0 267 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 AKAP7Q9P0M2 348 aaPredicted RBP4.76□□□□□ -1.65
VTI1B-202ENST00000553619 SEMA5BQ9P283 1151 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 FBLN5Q9UBX5 448 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 FTSJ1Q9UET6 329 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 LEF1Q9UJU2 399 aaPredicted RBP4.76□□□□□ -1.65
VTI1B-202ENST00000553619 PILRAQ9UKJ1 303 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 PSME2Q9UL46 239 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 CCL27Q9Y4X3 112 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 GPR45Q9Y5Y3 372 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 COPG1Q9Y678 874 aaKnown RBP4.76□□□□□ -1.65
VTI1B-202ENST00000553619 SLC22A7Q9Y694 548 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 SPACA6W5XKT8 324 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 LAMA3Q16787 3333 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 IGKV1-8A0A0C4DH67 115 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 LOC100653049A0A140TA62 436 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 FAM234BA2RU67 622 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 BLACEA4D250 179 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 C7orf72A4D263 438 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 LRIT2A6NDA9 550 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 CAPN14A8MX76 684 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 B2RBV5 119 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 H0YGG7 62 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 ANGPT2O15123 496 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 NDUFS4O43181 175 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 B3GALT2O43825 422 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 PCDH7O60245 1069 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 NRP2O60462 931 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 KRT34O76011 436 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 NTRK1P04629 796 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 JUNP05412 331 aaKnown RBP4.75□□□□□ -1.65
VTI1B-202ENST00000553619 KLK1P06870 262 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 HBQ1P09105 142 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 ANKRD34CP0C6C1 535 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 PIM1P11309 404 aaPredicted RBP4.75□□□□□ -1.65
VTI1B-202ENST00000553619 G6PDP11413 515 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 BCKDHAP12694 445 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 ST6GAL1P15907 406 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 ATF4P18848 351 aaPredicted RBP4.75□□□□□ -1.65
VTI1B-202ENST00000553619 GPX3P22352 226 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 ACP1P24666 158 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 PIK3R1P27986 724 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 CD1CP29017 333 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 TIA1P31483 386 aaKnown RBP eCLIP4.75□□□□□ -1.65
VTI1B-202ENST00000553619 CSTF2P33240 577 aaKnown RBP eCLIP4.75□□□□□ -1.65
VTI1B-202ENST00000553619 S100A3P33764 101 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 HPCAL1P37235 193 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 BCL6P41182 706 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 NBL1P41271 181 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 SSR2P43308 183 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 AVPR1BP47901 424 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 POLR2JP52435 117 aaKnown RBP4.75□□□□□ -1.65
VTI1B-202ENST00000553619 MAPK12P53778 367 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 MTTPP55157 894 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 ARF3P61204 181 aaPredicted RBP4.75□□□□□ -1.65
VTI1B-202ENST00000553619 CCL7P80098 99 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 ZNF763Q0D2J5 394 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 C2orf80Q0P641 193 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 TBL3Q12788 808 aaKnown RBP4.75□□□□□ -1.65
VTI1B-202ENST00000553619 TCF15Q12870 199 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 BNIP1Q12981 228 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 KCNAB2Q13303 367 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 BIKQ13323 160 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 FAM53BQ14153 422 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 SPIDRQ14159 915 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 GRM7Q14831 915 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 KIAA0040Q15053 153 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 FXNQ16595 210 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 MUM1Q2TAK8 710 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 ADPRMQ3LIE5 342 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 COQ5Q5HYK3 327 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 TOR1AIP1Q5JTV8 583 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 WASHC2DQ5SRD0 308 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 ANXA8L1Q5VT79 327 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 TMEM198Q66K66 360 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 GTF2IRD2BQ6EKJ0 949 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 TLDC1Q6P9B6 456 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 C16orf89Q6UX73 402 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 FAM92BQ6ZTR7 304 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 MSANTD1Q6ZTZ1 278 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 USP53Q70EK8 1073 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 IKBIPQ70UQ0 350 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 RNF44Q7L0R7 432 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 PRSS42Q7Z5A4 293 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 SPRED1Q7Z699 444 aa4.75□□□□□ -1.65
VTI1B-202ENST00000553619 GTF2IRD2Q86UP8 949 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms