RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 CSNK2A2P19784 350 aaPredicted RBP12.95□□□□□ -0.34
APEX1-205ENST00000553555 ALAS2P22557 587 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 CSTF2P33240 577 aaKnown RBP eCLIP12.95□□□□□ -0.34
APEX1-205ENST00000553555 PDX1P52945 283 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 SIM1P81133 766 aaPredicted RBP12.95□□□□□ -0.34
APEX1-205ENST00000553555 SHC2P98077 582 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 E2F1Q01094 437 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 LIPEQ05469 1076 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 ILKQ13418 452 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 C16orf72Q14CZ0 275 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 ZNF551Q7Z340 670 aaPredicted RBP12.95□□□□□ -0.34
APEX1-205ENST00000553555 FAM156AQ8NDB6 213 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 TMEM52Q8NDY8 209 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 OR4K14Q8NGD5 310 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 ZFP90Q8TF47 636 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 WDR60Q8WVS4 1066 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 AURKBQ96GD4 344 aaPredicted RBP12.95□□□□□ -0.34
APEX1-205ENST00000553555 AMDHD1Q96NU7 426 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 BBS4Q96RK4 519 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 THUMPD3Q9BV44 507 aaKnown RBP12.95□□□□□ -0.34
APEX1-205ENST00000553555 GLIPR2Q9H4G4 154 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 DENND2DQ9H6A0 471 aaPredicted RBP12.95□□□□□ -0.34
APEX1-205ENST00000553555 OCIAD1Q9NX40 245 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 HCN3Q9P1Z3 774 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 GMPR2Q9P2T1 348 aaKnown RBP12.95□□□□□ -0.34
APEX1-205ENST00000553555 RARRES3Q9UL19 164 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 CDC14AQ9UNH5 594 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 CLCA2Q9UQC9 943 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 AP3M1Q9Y2T2 418 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 GMEB1Q9Y692 573 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 ZNF780BQ9Y6R6 833 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 KNTC1P50748 2209 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 RIF1Q5UIP0 2472 aaKnown RBP12.95□□□□□ -0.34
APEX1-205ENST00000553555 AGRPO00253 132 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 CLIC1O00299 241 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 C1QCP02747 245 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 C8orf89P0DMQ9 161 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 TCN1P20061 433 aaPredicted RBP12.95□□□□□ -0.34
APEX1-205ENST00000553555 NTSP30990 170 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 MSX2P35548 267 aaPredicted RBP12.95□□□□□ -0.34
APEX1-205ENST00000553555 FEN1P39748 380 aaKnown RBP12.95□□□□□ -0.34
APEX1-205ENST00000553555 GSK3BP49841 420 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 MS4A2Q01362 244 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 TRIM25Q14258 630 aaKnown RBP12.95□□□□□ -0.34
APEX1-205ENST00000553555 ZNF750Q32MQ0 723 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 C6orf163Q5TEZ5 329 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 STPG1Q5TH74 334 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 RBM44Q6ZP01 1051 aaKnown RBP12.95□□□□□ -0.34
APEX1-205ENST00000553555 PIP4P1Q86T03 277 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 CCDC116Q8IYX3 515 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 METTL27Q8N6F8 245 aaPredicted RBP12.95□□□□□ -0.34
APEX1-205ENST00000553555 TRIML2Q8N7C3 387 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 ZFP28Q8NHY6 868 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 PSMA8Q8TAA3 256 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 SUN3Q8TAQ9 357 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 TANKQ92844 425 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 CCDC124Q96CT7 223 aaKnown RBP12.95□□□□□ -0.34
APEX1-205ENST00000553555 ZNF583Q96ND8 569 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 ECSITQ9BQ95 431 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 ALG2Q9H553 416 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 CXorf36Q9H7Y0 433 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 TPT1P8Q9HAU6 139 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 GIMAP4Q9NUV9 329 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 DHCR7Q9UBM7 475 aaKnown RBP12.95□□□□□ -0.34
APEX1-205ENST00000553555 NDOR1Q9UHB4 597 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 ENTPD4Q9Y227 616 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 NUP210LQ5VU65 1888 aa12.94□□□□□ -0.34
APEX1-205ENST00000553555 A0A1W2PS29 197 aa12.94□□□□□ -0.34
APEX1-205ENST00000553555 BLACEA4D250 179 aa12.94□□□□□ -0.34
APEX1-205ENST00000553555 EVPLLA8MZ36 301 aa12.94□□□□□ -0.34
APEX1-205ENST00000553555 RFPL3O75679 317 aa12.94□□□□□ -0.34
APEX1-205ENST00000553555 UQCRC2P22695 453 aa12.94□□□□□ -0.34
APEX1-205ENST00000553555 CCKBRP32239 447 aa12.94□□□□□ -0.34
APEX1-205ENST00000553555 XKP51811 444 aa12.94□□□□□ -0.34
APEX1-205ENST00000553555 NCBP2P52298 156 aaKnown RBP eCLIP12.94□□□□□ -0.34
APEX1-205ENST00000553555 MAT1AQ00266 395 aaKnown RBP12.94□□□□□ -0.34
APEX1-205ENST00000553555 DUSP2Q05923 314 aa12.94□□□□□ -0.34
APEX1-205ENST00000553555 HSPB3Q12988 150 aa12.94□□□□□ -0.34
APEX1-205ENST00000553555 GAB1Q13480 694 aa12.94□□□□□ -0.34
APEX1-205ENST00000553555 KPNB1Q14974 876 aaKnown RBP12.94□□□□□ -0.34
APEX1-205ENST00000553555 SYT16Q17RD7 645 aa12.94□□□□□ -0.34
APEX1-205ENST00000553555 C1orf146Q5VVC0 180 aa12.94□□□□□ -0.34
APEX1-205ENST00000553555 BPHLQ86WA6 291 aaPredicted RBP12.94□□□□□ -0.34
APEX1-205ENST00000553555 OR4N5Q8IXE1 308 aa12.94□□□□□ -0.34
APEX1-205ENST00000553555 SAMD14Q8IZD0 417 aaPredicted RBP12.94□□□□□ -0.34
APEX1-205ENST00000553555 CLEC4FQ8N1N0 589 aa12.94□□□□□ -0.34
APEX1-205ENST00000553555 AGBL5Q8NDL9 886 aa12.94□□□□□ -0.34
APEX1-205ENST00000553555 OR51Q1Q8NH59 317 aa12.94□□□□□ -0.34
APEX1-205ENST00000553555 OR10A6Q8NH74 314 aa12.94□□□□□ -0.34
APEX1-205ENST00000553555 ADAMTS18Q8TE60 1221 aa12.94□□□□□ -0.34
APEX1-205ENST00000553555 PEX11GQ96HA9 241 aa12.94□□□□□ -0.34
APEX1-205ENST00000553555 KAT8Q9H7Z6 458 aaKnown RBP12.94□□□□□ -0.34
APEX1-205ENST00000553555 SUCOQ9UBS9 1254 aaKnown RBP12.94□□□□□ -0.34
APEX1-205ENST00000553555 SRPK3Q9UPE1 567 aa12.94□□□□□ -0.34
APEX1-205ENST00000553555 A0A1B0GX78 115 aa12.93□□□□□ -0.34
APEX1-205ENST00000553555 EFCAB7A8K855 629 aa12.93□□□□□ -0.34
APEX1-205ENST00000553555 PROB1E7EW31 1015 aa12.93□□□□□ -0.34
APEX1-205ENST00000553555 ACOT8O14734 319 aa12.93□□□□□ -0.34
APEX1-205ENST00000553555 HYAL3O43820 417 aaPredicted RBP12.93□□□□□ -0.34
APEX1-205ENST00000553555 DNAJA2O60884 412 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms