RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 ZAR1LA6NP61 321 aa12.27□□□□□ -0.45
SHMT2-205ENST00000553474 J3QRK9 145 aa12.27□□□□□ -0.45
SHMT2-205ENST00000553474 MAGEB3O15480 346 aa12.27□□□□□ -0.45
SHMT2-205ENST00000553474 SERPINB7O75635 380 aa12.27□□□□□ -0.45
SHMT2-205ENST00000553474 ADH1BP00325 375 aa12.27□□□□□ -0.45
SHMT2-205ENST00000553474 EPHX1P07099 455 aa12.27□□□□□ -0.45
SHMT2-205ENST00000553474 TFPTP0C1Z6 253 aa12.27□□□□□ -0.45
SHMT2-205ENST00000553474 CD40LGP29965 261 aa12.27□□□□□ -0.45
SHMT2-205ENST00000553474 IDUAP35475 653 aa12.27□□□□□ -0.45
SHMT2-205ENST00000553474 TRIM23P36406 574 aa12.27□□□□□ -0.45
SHMT2-205ENST00000553474 IDH2P48735 452 aaKnown RBP12.27□□□□□ -0.45
SHMT2-205ENST00000553474 CLK1P49759 484 aaKnown RBP12.27□□□□□ -0.45
SHMT2-205ENST00000553474 VBP1P61758 197 aa12.27□□□□□ -0.45
SHMT2-205ENST00000553474 TFF2Q03403 129 aa12.27□□□□□ -0.45
SHMT2-205ENST00000553474 MESP2Q0VG99 397 aa12.27□□□□□ -0.45
SHMT2-205ENST00000553474 ITGADQ13349 1161 aa12.27□□□□□ -0.45
SHMT2-205ENST00000553474 GNA13Q14344 377 aa12.27□□□□□ -0.45
SHMT2-205ENST00000553474 TIGD6Q17RP2 521 aa12.27□□□□□ -0.45
SHMT2-205ENST00000553474 ZNF770Q6IQ21 691 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-205ENST00000553474 KIAA1161Q6NSJ0 714 aa12.27□□□□□ -0.45
SHMT2-205ENST00000553474 DUS1LQ6P1R4 473 aaKnown RBP12.27□□□□□ -0.45
SHMT2-205ENST00000553474 ZNF367Q7RTV3 350 aa12.27□□□□□ -0.45
SHMT2-205ENST00000553474 STX19Q8N4C7 294 aa12.27□□□□□ -0.45
SHMT2-205ENST00000553474 AMER2Q8N7J2 671 aa12.27□□□□□ -0.45
SHMT2-205ENST00000553474 PLA2G15Q8NCC3 412 aa12.27□□□□□ -0.45
SHMT2-205ENST00000553474 KBTBD8Q8NFY9 601 aa12.27□□□□□ -0.45
SHMT2-205ENST00000553474 SLC38A5Q8WUX1 472 aa12.27□□□□□ -0.45
SHMT2-205ENST00000553474 UBE2FQ969M7 185 aa12.27□□□□□ -0.45
SHMT2-205ENST00000553474 Q96MT0 163 aa12.27□□□□□ -0.45
SHMT2-205ENST00000553474 TIMM29Q9BSF4 260 aa12.27□□□□□ -0.45
SHMT2-205ENST00000553474 SLIRPQ9GZT3 109 aaKnown RBP12.27□□□□□ -0.45
SHMT2-205ENST00000553474 ZNF226Q9NYT6 803 aa12.27□□□□□ -0.45
SHMT2-205ENST00000553474 AASSQ9UDR5 926 aa12.27□□□□□ -0.45
SHMT2-205ENST00000553474 TMEM98Q9Y2Y6 226 aa12.27□□□□□ -0.45
SHMT2-205ENST00000553474 SNX8Q9Y5X2 465 aa12.27□□□□□ -0.45
SHMT2-205ENST00000553474 NDUFS4O43181 175 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 AIREO43918 545 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 KDM1AO60341 852 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 CNOT3O75175 753 aaKnown RBP12.26□□□□□ -0.45
SHMT2-205ENST00000553474 GUCY1B2O75343 617 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 MFN2O95140 757 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 VIPP01282 170 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 RPLP0P05388 317 aaKnown RBP12.26□□□□□ -0.45
SHMT2-205ENST00000553474 LCKP06239 509 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 NR4A1P22736 598 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 IL12RB1P42701 662 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 TSFMP43897 325 aaKnown RBP12.26□□□□□ -0.45
SHMT2-205ENST00000553474 CRISP1P54107 249 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 SMAD4Q13485 552 aaKnown RBP12.26□□□□□ -0.45
SHMT2-205ENST00000553474 IRF3Q14653 427 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 OXA1LQ15070 435 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 PTGES3Q15185 160 aaKnown RBP12.26□□□□□ -0.45
SHMT2-205ENST00000553474 TRIM16LQ309B1 348 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 IER5LQ5T953 404 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 FRMPD2BQ6IN97 320 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 BHLHB9Q6PI77 547 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 SLC46A3Q7Z3Q1 461 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 CCDC103Q8IW40 242 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 ADGRF3Q8IZF5 1079 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 SDR16C5Q8N3Y7 309 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 IL17RCQ8NAC3 791 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 FAM46DQ8NEK8 389 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 OR52J3Q8NH60 311 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 ZNF675Q8TD23 568 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 FGF13Q92913 245 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 ZNF354BQ96LW1 612 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 F2RL3Q96RI0 385 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 RHNO1Q9BSD3 238 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 SPATA5L1Q9BVQ7 753 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 FAIM2Q9BWQ8 316 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 WDR26Q9H7D7 661 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 DNAAF2Q9NVR5 837 aaKnown RBP12.26□□□□□ -0.45
SHMT2-205ENST00000553474 RLIMQ9NVW2 624 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 CLN6Q9NWW5 311 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 P2RX2Q9UBL9 471 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 FTSJ1Q9UET6 329 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 SLC23A2Q9UGH3 650 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 ACAD8Q9UKU7 415 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 DUSP12Q9UNI6 340 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 CKAP5Q14008 2032 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 PLXND1Q9Y4D7 1925 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 COL4A3Q01955 1670 aa12.26□□□□□ -0.45
SHMT2-205ENST00000553474 A0A1W2PPV9 198 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 FUOMA2VDF0 154 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 ISPDA4D126 451 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 OTOL1A6NHN0 477 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-205ENST00000553474 SAGE2PA6NJ88 616 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 TAF4O00268 1085 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 FAAHO00519 579 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 PCDH17O14917 1159 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 MBTPS2O43462 519 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 TNFRSF1BP20333 461 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 C5AR1P21730 350 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 PPP2R1BP30154 601 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 DRD3P35462 400 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 KCNJ5P48544 419 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 RAB28P51157 221 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 BCAP31P51572 246 aa12.25□□□□□ -0.45
SHMT2-205ENST00000553474 SNRPGP62308 76 aaKnown RBP12.25□□□□□ -0.45
SHMT2-205ENST00000553474 ABATP80404 500 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms