RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 C18orf63Q68DL7 685 aa14.3□□□□□ -0.12
SHMT2-204ENST00000553324 HSDL2Q6YN16 418 aa14.3□□□□□ -0.12
SHMT2-204ENST00000553324 ST13P4Q8IZP2 240 aaPredicted RBP14.3□□□□□ -0.12
SHMT2-204ENST00000553324 FAM26EQ8N5C1 309 aa14.3□□□□□ -0.12
SHMT2-204ENST00000553324 AMER2Q8N7J2 671 aa14.3□□□□□ -0.12
SHMT2-204ENST00000553324 CCNYL1Q8N7R7 359 aa14.3□□□□□ -0.12
SHMT2-204ENST00000553324 CDYL2Q8N8U2 506 aa14.3□□□□□ -0.12
SHMT2-204ENST00000553324 TMEM178AQ8NBL3 297 aa14.3□□□□□ -0.12
SHMT2-204ENST00000553324 ST6GALNAC3Q8NDV1 305 aa14.3□□□□□ -0.12
SHMT2-204ENST00000553324 TMEM125Q96AQ2 219 aa14.3□□□□□ -0.12
SHMT2-204ENST00000553324 C5orf34Q96MH7 638 aa14.3□□□□□ -0.12
SHMT2-204ENST00000553324 NPAS2Q99743 824 aa14.3□□□□□ -0.12
SHMT2-204ENST00000553324 PARD6BQ9BYG5 372 aa14.3□□□□□ -0.12
SHMT2-204ENST00000553324 TRIM45Q9H8W5 580 aaPredicted RBP14.3□□□□□ -0.12
SHMT2-204ENST00000553324 RYDENQ9NUL5 291 aaKnown RBP14.3□□□□□ -0.12
SHMT2-204ENST00000553324 LRFN1Q9P244 771 aa14.3□□□□□ -0.12
SHMT2-204ENST00000553324 COPS7AQ9UBW8 275 aa14.3□□□□□ -0.12
SHMT2-204ENST00000553324 EMCNQ9ULC0 261 aa14.3□□□□□ -0.12
SHMT2-204ENST00000553324 YARS2Q9Y2Z4 477 aaKnown RBP14.3□□□□□ -0.12
SHMT2-204ENST00000553324 PRRC2CQ9Y520 2896 aaKnown RBP14.3□□□□□ -0.12
SHMT2-204ENST00000553324 SCN2AQ99250 2005 aa14.29□□□□□ -0.12
SHMT2-204ENST00000553324 NBASA2RRP1 2371 aa14.29□□□□□ -0.12
SHMT2-204ENST00000553324 A0A1B0GTL3 188 aa14.29□□□□□ -0.12
SHMT2-204ENST00000553324 A0A1W2PR48 441 aa14.29□□□□□ -0.12
SHMT2-204ENST00000553324 ANKUB1A6NFN9 424 aa14.29□□□□□ -0.12
SHMT2-204ENST00000553324 MANBAO00462 879 aa14.29□□□□□ -0.12
SHMT2-204ENST00000553324 FGF17O60258 216 aa14.29□□□□□ -0.12
SHMT2-204ENST00000553324 EDN3P14138 238 aa14.29□□□□□ -0.12
SHMT2-204ENST00000553324 ALOX15P16050 662 aaPredicted RBP14.29□□□□□ -0.12
SHMT2-204ENST00000553324 TPP2P29144 1249 aaPredicted RBP14.29□□□□□ -0.12
SHMT2-204ENST00000553324 GALNSP34059 522 aa14.29□□□□□ -0.12
SHMT2-204ENST00000553324 HLCSP50747 726 aa14.29□□□□□ -0.12
SHMT2-204ENST00000553324 MAPK12P53778 367 aa14.29□□□□□ -0.12
SHMT2-204ENST00000553324 NAGLUP54802 743 aa14.29□□□□□ -0.12
SHMT2-204ENST00000553324 TRA2BP62995 288 aaKnown RBP14.29□□□□□ -0.12
SHMT2-204ENST00000553324 FOLH1Q04609 750 aa14.29□□□□□ -0.12
SHMT2-204ENST00000553324 ASPHQ12797 758 aa14.29□□□□□ -0.12
SHMT2-204ENST00000553324 NR6A1Q15406 480 aa14.29□□□□□ -0.12
SHMT2-204ENST00000553324 SPINK14Q6IE38 97 aa14.29□□□□□ -0.12
SHMT2-204ENST00000553324 SLC25A25Q6KCM7 469 aa14.29□□□□□ -0.12
SHMT2-204ENST00000553324 C4orf33Q8N1A6 199 aa14.29□□□□□ -0.12
SHMT2-204ENST00000553324 MREGQ8N565 214 aa14.29□□□□□ -0.12
SHMT2-204ENST00000553324 TMEM156Q8N614 296 aa14.29□□□□□ -0.12
SHMT2-204ENST00000553324 FAM98AQ8NCA5 519 aaKnown RBP14.29□□□□□ -0.12
SHMT2-204ENST00000553324 MDS2Q8NDY4 140 aa14.29□□□□□ -0.12
SHMT2-204ENST00000553324 OR2W6PQ8NHA6 318 aa14.29□□□□□ -0.12
SHMT2-204ENST00000553324 TMEM109Q9BVC6 243 aa14.29□□□□□ -0.12
SHMT2-204ENST00000553324 MRPL1Q9BYD6 325 aaKnown RBP14.29□□□□□ -0.12
SHMT2-204ENST00000553324 OR8D2Q9GZM6 311 aa14.29□□□□□ -0.12
SHMT2-204ENST00000553324 FARSBQ9NSD9 589 aaKnown RBP14.29□□□□□ -0.12
SHMT2-204ENST00000553324 OLAHQ9NV23 265 aa14.29□□□□□ -0.12
SHMT2-204ENST00000553324 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.29□□□□□ -0.126e-6■■□□□ 12.1
SHMT2-204ENST00000553324 OXSMQ9NWU1 459 aa14.29□□□□□ -0.12
SHMT2-204ENST00000553324 MKS1Q9NXB0 559 aa14.29□□□□□ -0.12
SHMT2-204ENST00000553324 LGALS13Q9UHV8 139 aa14.29□□□□□ -0.12
SHMT2-204ENST00000553324 PSME2Q9UL46 239 aa14.29□□□□□ -0.12
SHMT2-204ENST00000553324 MYO18BQ8IUG5 2567 aa14.29□□□□□ -0.12
SHMT2-204ENST00000553324 SERTM1A2A2V5 107 aa14.28□□□□□ -0.12
SHMT2-204ENST00000553324 FOXO6A8MYZ6 492 aa14.28□□□□□ -0.12
SHMT2-204ENST00000553324 OR10H2O60403 315 aa14.28□□□□□ -0.12
SHMT2-204ENST00000553324 UBR5O95071 2799 aaPredicted RBP14.28□□□□□ -0.12
SHMT2-204ENST00000553324 GBAP04062 536 aa14.28□□□□□ -0.12
SHMT2-204ENST00000553324 SP1P08047 785 aa14.28□□□□□ -0.12
SHMT2-204ENST00000553324 SLC35E2P0CK97 266 aa14.28□□□□□ -0.12
SHMT2-204ENST00000553324 ID2Q02363 134 aa14.28□□□□□ -0.12
SHMT2-204ENST00000553324 TBL3Q12788 808 aaKnown RBP14.28□□□□□ -0.12
SHMT2-204ENST00000553324 NDUFAF5Q5TEU4 345 aa14.28□□□□□ -0.12
SHMT2-204ENST00000553324 LIPMQ5VYY2 423 aa14.28□□□□□ -0.12
SHMT2-204ENST00000553324 OR52E8Q6IFG1 317 aa14.28□□□□□ -0.12
SHMT2-204ENST00000553324 TENM4Q6N022 2769 aa14.28□□□□□ -0.12
SHMT2-204ENST00000553324 COMMD6Q7Z4G1 85 aa14.28□□□□□ -0.12
SHMT2-204ENST00000553324 TRABD2AQ86V40 505 aa14.28□□□□□ -0.12
SHMT2-204ENST00000553324 RP1L1Q8IWN7 2480 aaPredicted RBP14.28□□□□□ -0.12
SHMT2-204ENST00000553324 OR4N5Q8IXE1 308 aa14.28□□□□□ -0.12
SHMT2-204ENST00000553324 GPALPP1Q8IXQ4 340 aa14.28□□□□□ -0.12
SHMT2-204ENST00000553324 SLC2A12Q8TD20 617 aa14.28□□□□□ -0.12
SHMT2-204ENST00000553324 SCMH1Q96GD3 660 aa14.28□□□□□ -0.12
SHMT2-204ENST00000553324 SENP5Q96HI0 755 aaPredicted RBP14.28□□□□□ -0.12
SHMT2-204ENST00000553324 SIGLEC12Q96PQ1 595 aa14.28□□□□□ -0.12
SHMT2-204ENST00000553324 GSTO2Q9H4Y5 243 aa14.28□□□□□ -0.12
SHMT2-204ENST00000553324 MID1IP1Q9NPA3 183 aa14.28□□□□□ -0.12
SHMT2-204ENST00000553324 ANKRD10Q9NXR5 420 aa14.28□□□□□ -0.12
SHMT2-204ENST00000553324 MYOTQ9UBF9 498 aa14.28□□□□□ -0.12
SHMT2-204ENST00000553324 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.28□□□□□ -0.12
SHMT2-204ENST00000553324 RAB21Q9UL25 225 aa14.28□□□□□ -0.12
SHMT2-204ENST00000553324 NTNG1Q9Y2I2 539 aa14.28□□□□□ -0.12
SHMT2-204ENST00000553324 PLLPQ9Y342 182 aa14.28□□□□□ -0.12
SHMT2-204ENST00000553324 V9GYY5 206 aaPredicted RBP14.28□□□□□ -0.12
SHMT2-204ENST00000553324 C1orf226A1L170 272 aa14.27□□□□□ -0.13
SHMT2-204ENST00000553324 MAN1A2O60476 641 aa14.27□□□□□ -0.13
SHMT2-204ENST00000553324 CRCPO75575 148 aa14.27□□□□□ -0.13
SHMT2-204ENST00000553324 ITGA10O75578 1167 aa14.27□□□□□ -0.13
SHMT2-204ENST00000553324 NEURL1O76050 574 aa14.27□□□□□ -0.13
SHMT2-204ENST00000553324 AIFM1O95831 613 aa14.27□□□□□ -0.13
SHMT2-204ENST00000553324 DDAH2O95865 285 aa14.27□□□□□ -0.13
SHMT2-204ENST00000553324 PIK3R1P27986 724 aa14.27□□□□□ -0.13
SHMT2-204ENST00000553324 UQCRFS1P47985 274 aa14.27□□□□□ -0.13
SHMT2-204ENST00000553324 SSR4P51571 173 aa14.27□□□□□ -0.13
SHMT2-204ENST00000553324 MAPKAPK3Q16644 382 aa14.27□□□□□ -0.13
SHMT2-204ENST00000553324 EIF2S3LQ2VIR3 472 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms