RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 H2AFYO75367 372 aaKnown RBP10.99□□□□□ -0.65
CKAP4-202ENST00000552828 OR2J2O76002 312 aa10.99□□□□□ -0.65
CKAP4-202ENST00000552828 PDE9AO76083 593 aa10.99□□□□□ -0.65
CKAP4-202ENST00000552828 IGHG3P01860 377 aa10.99□□□□□ -0.65
CKAP4-202ENST00000552828 MTHFD2P13995 350 aa10.99□□□□□ -0.65
CKAP4-202ENST00000552828 H2AFXP16104 143 aaPredicted RBP10.99□□□□□ -0.65
CKAP4-202ENST00000552828 KRT15P19012 456 aa10.99□□□□□ -0.65
CKAP4-202ENST00000552828 GSTM2P28161 218 aa10.99□□□□□ -0.65
CKAP4-202ENST00000552828 PPP2R1BP30154 601 aa10.99□□□□□ -0.65
CKAP4-202ENST00000552828 HNRNPFP52597 415 aaKnown RBP10.99□□□□□ -0.65
CKAP4-202ENST00000552828 ALDH18A1P54886 795 aaKnown RBP10.99□□□□□ -0.65
CKAP4-202ENST00000552828 NUP107P57740 925 aa10.99□□□□□ -0.65
CKAP4-202ENST00000552828 PPIAP62937 165 aaKnown RBP10.99□□□□□ -0.65
CKAP4-202ENST00000552828 BTN3A2P78410 334 aa10.99□□□□□ -0.65
CKAP4-202ENST00000552828 PDK4Q16654 411 aa10.99□□□□□ -0.65
CKAP4-202ENST00000552828 PFKFB4Q16877 469 aa10.99□□□□□ -0.65
CKAP4-202ENST00000552828 ADPRMQ3LIE5 342 aa10.99□□□□□ -0.65
CKAP4-202ENST00000552828 GXYLT1Q4G148 440 aa10.99□□□□□ -0.65
CKAP4-202ENST00000552828 FBXO48Q5FWF7 155 aa10.99□□□□□ -0.65
CKAP4-202ENST00000552828 TECRLQ5HYJ1 363 aa10.99□□□□□ -0.65
CKAP4-202ENST00000552828 TOR1AIP1Q5JTV8 583 aa10.99□□□□□ -0.65
CKAP4-202ENST00000552828 SLCO4C1Q6ZQN7 724 aa10.99□□□□□ -0.65
CKAP4-202ENST00000552828 LRRC70Q7Z2Q7 622 aa10.99□□□□□ -0.65
CKAP4-202ENST00000552828 TMPRSS11BQ86T26 416 aa10.99□□□□□ -0.65
CKAP4-202ENST00000552828 CCDC71Q8IV32 467 aaPredicted RBP10.99□□□□□ -0.65
CKAP4-202ENST00000552828 ZNF595Q8IYB9 648 aa10.99□□□□□ -0.65
CKAP4-202ENST00000552828 MREGQ8N565 214 aa10.99□□□□□ -0.65
CKAP4-202ENST00000552828 SNX31Q8N9S9 440 aa10.99□□□□□ -0.65
CKAP4-202ENST00000552828 TMEM52Q8NDY8 209 aa10.99□□□□□ -0.65
CKAP4-202ENST00000552828 TTLQ8NG68 377 aa10.99□□□□□ -0.65
CKAP4-202ENST00000552828 OR2M7Q8NG81 312 aa10.99□□□□□ -0.65
CKAP4-202ENST00000552828 EPS8L3Q8TE67 593 aaKnown RBP10.99□□□□□ -0.65
CKAP4-202ENST00000552828 ESAMQ96AP7 390 aa10.99□□□□□ -0.65
CKAP4-202ENST00000552828 FAR2Q96K12 515 aa10.99□□□□□ -0.65
CKAP4-202ENST00000552828 QRFPRQ96P65 431 aa10.99□□□□□ -0.65
CKAP4-202ENST00000552828 MRPL57Q9BQC6 102 aaKnown RBP10.99□□□□□ -0.65
CKAP4-202ENST00000552828 PITHD1Q9GZP4 211 aaPredicted RBP10.99□□□□□ -0.65
CKAP4-202ENST00000552828 DEFB127Q9H1M4 99 aa10.99□□□□□ -0.65
CKAP4-202ENST00000552828 NT5DC2Q9H857 520 aa10.99□□□□□ -0.65
CKAP4-202ENST00000552828 ADAP2Q9NPF8 381 aa10.99□□□□□ -0.65
CKAP4-202ENST00000552828 PRTFDC1Q9NRG1 225 aa10.99□□□□□ -0.65
CKAP4-202ENST00000552828 PNO1Q9NRX1 252 aaKnown RBP10.99□□□□□ -0.65
CKAP4-202ENST00000552828 CPSF2Q9P2I0 782 aaKnown RBP10.99□□□□□ -0.65
CKAP4-202ENST00000552828 TMCO1Q9UM00 188 aa10.99□□□□□ -0.65
CKAP4-202ENST00000552828 ERVK-11Q9UQG0 969 aa10.99□□□□□ -0.65
CKAP4-202ENST00000552828 TNPO3Q9Y5L0 923 aaKnown RBP10.99□□□□□ -0.65
CKAP4-202ENST00000552828 VPS13CQ709C8 3753 aa10.98□□□□□ -0.65
CKAP4-202ENST00000552828 A0A1B0GVC2 190 aa10.98□□□□□ -0.65
CKAP4-202ENST00000552828 FAM90A27PA6NNH2 459 aa10.98□□□□□ -0.65
CKAP4-202ENST00000552828 A8MVJ9 347 aa10.98□□□□□ -0.65
CKAP4-202ENST00000552828 GOLGA8RI6L899 631 aa10.98□□□□□ -0.65
CKAP4-202ENST00000552828 K7EPI3 171 aa10.98□□□□□ -0.65
CKAP4-202ENST00000552828 CYR61O00622 381 aa10.98□□□□□ -0.65
CKAP4-202ENST00000552828 KLK8O60259 260 aa10.98□□□□□ -0.65
CKAP4-202ENST00000552828 SMIM24O75264 130 aa10.98□□□□□ -0.65
CKAP4-202ENST00000552828 OR6B1O95007 311 aa10.98□□□□□ -0.65
CKAP4-202ENST00000552828 TBX6O95947 436 aaPredicted RBP10.98□□□□□ -0.65
CKAP4-202ENST00000552828 C1GALT1C1LP0DN25 315 aa10.98□□□□□ -0.65
CKAP4-202ENST00000552828 PYGBP11216 843 aa10.98□□□□□ -0.65
CKAP4-202ENST00000552828 HNRNPH1P31943 449 aaKnown RBP10.98□□□□□ -0.65
CKAP4-202ENST00000552828 RAB38P57729 211 aa10.98□□□□□ -0.65
CKAP4-202ENST00000552828 SLC13A2Q13183 592 aa10.98□□□□□ -0.65
CKAP4-202ENST00000552828 SETDB1Q15047 1291 aa10.98□□□□□ -0.65
CKAP4-202ENST00000552828 ELAVL1Q15717 326 aaKnown RBP10.98□□□□□ -0.65
CKAP4-202ENST00000552828 HYAL4Q2M3T9 481 aa10.98□□□□□ -0.65
CKAP4-202ENST00000552828 NDUFAF5Q5TEU4 345 aa10.98□□□□□ -0.65
CKAP4-202ENST00000552828 CES4AQ5XG92 561 aa10.98□□□□□ -0.65
CKAP4-202ENST00000552828 TMIGD1Q6UXZ0 262 aa10.98□□□□□ -0.65
CKAP4-202ENST00000552828 C16orf47Q6ZP98 133 aaPredicted RBP10.98□□□□□ -0.65
CKAP4-202ENST00000552828 SLC22A16Q86VW1 577 aa10.98□□□□□ -0.65
CKAP4-202ENST00000552828 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.98□□□□□ -0.65
CKAP4-202ENST00000552828 TMEM132CQ8N3T6 1108 aa10.98□□□□□ -0.65
CKAP4-202ENST00000552828 RIBC1Q8N443 379 aaPredicted RBP10.98□□□□□ -0.65
CKAP4-202ENST00000552828 OR8K3Q8NH51 312 aa10.98□□□□□ -0.65
CKAP4-202ENST00000552828 OR2W6PQ8NHA6 318 aa10.98□□□□□ -0.65
CKAP4-202ENST00000552828 MZB1Q8WU39 189 aa10.98□□□□□ -0.65
CKAP4-202ENST00000552828 UBTD2Q8WUN7 234 aa10.98□□□□□ -0.65
CKAP4-202ENST00000552828 RASL10BQ96S79 203 aa10.98□□□□□ -0.65
CKAP4-202ENST00000552828 ZNF559Q9BR84 538 aa10.98□□□□□ -0.65
CKAP4-202ENST00000552828 TTTY12Q9BZ98 90 aa10.98□□□□□ -0.65
CKAP4-202ENST00000552828 ROPN1BQ9BZX4 212 aaPredicted RBP10.98□□□□□ -0.65
CKAP4-202ENST00000552828 MRPL46Q9H2W6 279 aaKnown RBP10.98□□□□□ -0.65
CKAP4-202ENST00000552828 EHD1Q9H4M9 534 aa10.98□□□□□ -0.65
CKAP4-202ENST00000552828 ROPN1Q9HAT0 212 aaPredicted RBP10.98□□□□□ -0.65
CKAP4-202ENST00000552828 HPF1Q9NWY4 346 aa10.98□□□□□ -0.65
CKAP4-202ENST00000552828 XPR1Q9UBH6 696 aa10.98□□□□□ -0.65
CKAP4-202ENST00000552828 OPTCQ9UBM4 332 aa10.98□□□□□ -0.65
CKAP4-202ENST00000552828 VTI1BQ9UEU0 232 aa10.98□□□□□ -0.65
CKAP4-202ENST00000552828 DCDC2Q9UHG0 476 aa10.98□□□□□ -0.65
CKAP4-202ENST00000552828 MRPS33Q9Y291 106 aaKnown RBP10.98□□□□□ -0.65
CKAP4-202ENST00000552828 ANGPTL3Q9Y5C1 460 aa10.98□□□□□ -0.65
CKAP4-202ENST00000552828 A0A088AWK7 358 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 A0A1W2PPM1 405 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 FAM221AA4D161 298 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 NPIPA2E9PIF3 369 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 NPIPA3F8WFD2 350 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 ACOT7O00154 380 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 BCKDKO14874 412 aa10.97□□□□□ -0.65
CKAP4-202ENST00000552828 ERI3O43414 337 aaKnown RBP10.97□□□□□ -0.65
CKAP4-202ENST00000552828 ATP8B1O43520 1251 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms