RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 ADARP55265 1226 aaKnown RBP4.93□□□□□ -1.62
HOXB3-213ENST00000552000 UBASH3AP57075 661 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 TBPL1P62380 186 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 SKP1P63208 163 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 PCDH1Q08174 1060 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 DMTNQ08495 405 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 HYAL4Q2M3T9 481 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 P3H1Q32P28 736 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 HEPHL1Q6MZM0 1159 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 AADACL2Q6P093 401 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 PPP1R21Q6ZMI0 780 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 ABHD13Q7L211 337 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 C17orf64Q86WR6 236 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 LACC1Q8IV20 430 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 REXO1L1PQ8IX06 675 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 MPP5Q8N3R9 675 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 LIX1Q8N485 282 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 MFSD9Q8NBP5 474 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 NEIL3Q8TAT5 605 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 ISL2Q96A47 359 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 IQCDQ96DY2 449 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 BIRC8Q96P09 236 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 WDR83Q9BRX9 315 aaKnown RBP4.93□□□□□ -1.62
HOXB3-213ENST00000552000 RBM24Q9BX46 236 aaKnown RBP4.93□□□□□ -1.62
HOXB3-213ENST00000552000 C12orf49Q9H741 205 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 ZNF703Q9H7S9 590 aaPredicted RBP4.93□□□□□ -1.62
HOXB3-213ENST00000552000 CCDC177Q9NQR7 707 aaPredicted RBP4.93□□□□□ -1.62
HOXB3-213ENST00000552000 GALNT8Q9NY28 637 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 C6orf203Q9P0P8 240 aaPredicted RBP4.93□□□□□ -1.62
HOXB3-213ENST00000552000 MYOTQ9UBF9 498 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 PPIEQ9UNP9 301 aaKnown RBP4.93□□□□□ -1.62
HOXB3-213ENST00000552000 ZNF148Q9UQR1 794 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 ATG4BQ9Y4P1 393 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.93□□□□□ -1.62
HOXB3-213ENST00000552000 TRRAPQ9Y4A5 3859 aa4.93□□□□□ -1.62
HOXB3-213ENST00000552000 PRKDCP78527 4128 aaKnown RBP4.92□□□□□ -1.62
HOXB3-213ENST00000552000 A0A087X1B8 175 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 MYOCOSA0A1B0GUC4 107 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 A6NHS1 94 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 LRRC3CA6NJW4 275 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 AHRRA9YTQ3 701 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 GOLGA8KD6RF30 607 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 E5RI56 91 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 H3BMM5 538 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 GOLGA8TH3BQL2 631 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 EREGO14944 169 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 OR1F1O43749 312 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 AVILO75366 819 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 IL18BPO95998 194 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 CTSSP25774 331 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 OPRM1P35372 400 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 GRK3P35626 688 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 RAB8AP61006 207 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 KCNJ2P63252 427 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 DUSP8Q13202 625 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 TNK1Q13470 666 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 NAE1Q13564 534 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 CUL1Q13616 776 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 BMPR2Q13873 1038 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 RPS6KA1Q15418 735 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 TERF2Q15554 542 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 ACKR1Q16570 336 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 KRTAP24-1Q3LI83 254 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 PRAMEF20Q5VT98 475 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 NSUN5P2Q63ZY6 315 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 HSDL2Q6YN16 418 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 MBOAT1Q6ZNC8 495 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 LUZP2Q86TE4 346 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 HIPK1Q86Z02 1210 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 SCUBE1Q8IWY4 988 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.92□□□□□ -1.629e-8■■■■■ 109.2
HOXB3-213ENST00000552000 CA13Q8N1Q1 262 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 RASGEF1CQ8N431 466 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 PRELID2Q8N945 189 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 TC2NQ8N9U0 490 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 GOLM1Q8NBJ4 401 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 PPHLN1Q8NEY8 458 aaKnown RBP4.92□□□□□ -1.62
HOXB3-213ENST00000552000 UTP15Q8TED0 518 aaKnown RBP4.92□□□□□ -1.62
HOXB3-213ENST00000552000 ASB11Q8WXH4 323 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 LPGAT1Q92604 370 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 HSPBAP1Q96EW2 488 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 PIK3IP1Q96FE7 263 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 SGCZQ96LD1 299 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 CCDC42Q96M95 316 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 JSRP1Q96MG2 331 aaPredicted RBP4.92□□□□□ -1.62
HOXB3-213ENST00000552000 CHP1Q99653 195 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 BPIFA3Q9BQP9 254 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 PIGQQ9BRB3 760 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 FAM129AQ9BZQ8 928 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 PCBD2Q9H0N5 130 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 PRDM7Q9NQW5 492 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 CHRAC1Q9NRG0 131 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 YAE1D1Q9NRH1 226 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 JKAMPQ9P055 326 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 BOKQ9UMX3 212 aaPredicted RBP4.92□□□□□ -1.62
HOXB3-213ENST00000552000 CAMK2AQ9UQM7 478 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 EFR3BQ9Y2G0 817 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 CRYL1Q9Y2S2 319 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.92□□□□□ -1.62
HOXB3-213ENST00000552000 TESMINQ9Y4I5 508 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms