RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 C18orf63Q68DL7 685 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 SLC48A1Q6P1K1 146 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 FBXO42Q6P3S6 717 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 FAHD1Q6P587 224 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 FIGLAQ6QHK4 219 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 TMEM64Q6YI46 380 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 RBM44Q6ZP01 1051 aaKnown RBP10.89□□□□□ -0.67
RAB5C-208ENST00000551338 THAP5Q7Z6K1 395 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 KCT2Q8NC54 265 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 OR4C15Q8NGM1 316 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 OR10G6Q8NH81 332 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 SUN3Q8TAQ9 357 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 SPPL2AQ8TCT8 520 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 SFXN5Q8TD22 340 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 ADAMTS16Q8TE57 1224 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 UTP15Q8TED0 518 aaKnown RBP10.89□□□□□ -0.67
RAB5C-208ENST00000551338 RLN3Q8WXF3 142 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 KLHL6Q8WZ60 621 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 RAB8BQ92930 207 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 CNRIP1Q96F85 164 aaPredicted RBP10.89□□□□□ -0.67
RAB5C-208ENST00000551338 SMIM10Q96HG1 83 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 TMEM19Q96HH6 336 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 OR2A5Q96R48 311 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 ZNF300Q96RE9 604 aaPredicted RBP10.89□□□□□ -0.67
RAB5C-208ENST00000551338 TSC22D3Q99576 134 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 EPYCQ99645 322 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 MAPKAP1Q9BPZ7 522 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 ZSCAN32Q9NX65 697 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 NDUFAF4Q9P032 175 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 PDP1Q9P0J1 537 aaPredicted RBP10.89□□□□□ -0.67
RAB5C-208ENST00000551338 PILRAQ9UKJ1 303 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 PCDHGA8Q9Y5G5 932 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 PCDHGA2Q9Y5H1 932 aa10.89□□□□□ -0.67
RAB5C-208ENST00000551338 KIR2DS5A0A0G2JLQ3 304 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 A0A0G2JNG1 304 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 A0A0J9YVX5 310 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 LOC100130705A0A1B0GUX0 176 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 PRAMEF27A3QJZ7 478 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 GSAPA4D1B5 854 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 GLOD5A6NK44 160 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 OR5K4A6NMS3 321 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 E9PQ18 207 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 KIR2DS3K7RE56 304 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 SH3BP5O60239 455 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 ERAL1O75616 437 aaKnown RBP10.88□□□□□ -0.67
RAB5C-208ENST00000551338 DNAJB5O75953 348 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 TFPTP0C1Z6 253 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 ALPPL2P10696 532 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 PVRP15151 417 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 PTGER1P34995 402 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 GPC1P35052 558 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 POLR2IP36954 125 aaKnown RBP10.88□□□□□ -0.67
RAB5C-208ENST00000551338 RXRGP48443 463 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 CLK3P49761 638 aaKnown RBP10.88□□□□□ -0.67
RAB5C-208ENST00000551338 HLCSP50747 726 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 NCBP2P52298 156 aaKnown RBP eCLIP10.88□□□□□ -0.67
RAB5C-208ENST00000551338 TGM3Q08188 693 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 CD47Q08722 323 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 IL18R1Q13478 541 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 TP53BP2Q13625 1128 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 KIR2DS5Q14953 304 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 CEBPEQ15744 281 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 CTU2Q2VPK5 515 aaKnown RBP10.88□□□□□ -0.67
RAB5C-208ENST00000551338 ZNF750Q32MQ0 723 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 LAIR2Q6ISS4 152 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 REEP3Q6NUK4 255 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 GALNT5Q7Z7M9 940 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 ZNF605Q86T29 641 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 ARMC8Q8IUR7 673 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 FAM160A2Q8N612 972 aaPredicted RBP10.88□□□□□ -0.67
RAB5C-208ENST00000551338 CHDHQ8NE62 594 aaPredicted RBP10.88□□□□□ -0.67
RAB5C-208ENST00000551338 GPR32P1Q8NGA4 272 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 ZCCHC10Q8TBK6 192 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 FBLIM1Q8WUP2 373 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 SLC38A5Q8WUX1 472 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 APOBEC4Q8WW27 367 aaKnown RBP10.88□□□□□ -0.67
RAB5C-208ENST00000551338 GEMIN6Q8WXD5 167 aaKnown RBP10.88□□□□□ -0.67
RAB5C-208ENST00000551338 LZICQ8WZA0 190 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 HDAC2Q92769 488 aaKnown RBP10.88□□□□□ -0.67
RAB5C-208ENST00000551338 TMIGD2Q96BF3 282 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 THAP11Q96EK4 314 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 C10orf90Q96M02 699 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 BBS4Q96RK4 519 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 RSPO3Q9BXY4 272 aaPredicted RBP10.88□□□□□ -0.67
RAB5C-208ENST00000551338 CHRDQ9H2X0 955 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 OR51I1Q9H343 314 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 ZCCHC3Q9NUD5 404 aaKnown RBP10.88□□□□□ -0.67
RAB5C-208ENST00000551338 THEGQ9P2T0 379 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 CPNE7Q9UBL6 633 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 RAB23Q9ULC3 237 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 ENTPD4Q9Y227 616 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 ZNF451Q9Y4E5 1061 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 TESMINQ9Y4I5 508 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 KLK4Q9Y5K2 254 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 ORC6Q9Y5N6 252 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 LYVE1Q9Y5Y7 322 aa10.88□□□□□ -0.67
RAB5C-208ENST00000551338 A0A0J9YY10 115 aa10.87□□□□□ -0.67
RAB5C-208ENST00000551338 C2orf74A8MZ97 194 aa10.87□□□□□ -0.67
RAB5C-208ENST00000551338 C5orf58C9J3I9 102 aa10.87□□□□□ -0.67
RAB5C-208ENST00000551338 SOX1O00570 391 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms