RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 VSX2P58304 361 aaPredicted RBP11.89□□□□□ -0.51
CACNB3-217ENST00000550483 BNC1Q01954 994 aa11.89□□□□□ -0.51
CACNB3-217ENST00000550483 CHRNB3Q05901 458 aa11.89□□□□□ -0.51
CACNB3-217ENST00000550483 GAB1Q13480 694 aa11.89□□□□□ -0.51
CACNB3-217ENST00000550483 GRM7Q14831 915 aa11.89□□□□□ -0.51
CACNB3-217ENST00000550483 MPEG1Q2M385 716 aa11.89□□□□□ -0.51
CACNB3-217ENST00000550483 HLA-BQ31612 363 aa11.89□□□□□ -0.51
CACNB3-217ENST00000550483 GCNT6Q5T4J0 391 aa11.89□□□□□ -0.51
CACNB3-217ENST00000550483 YOD1Q5VVQ6 348 aaPredicted RBP11.89□□□□□ -0.51
CACNB3-217ENST00000550483 FRMPD2BQ6IN97 320 aa11.89□□□□□ -0.51
CACNB3-217ENST00000550483 ZZZ3Q8IYH5 903 aa11.89□□□□□ -0.51
CACNB3-217ENST00000550483 ADGRG5Q8IZF4 528 aa11.89□□□□□ -0.51
CACNB3-217ENST00000550483 TTC29Q8NA56 475 aaPredicted RBP11.89□□□□□ -0.51
CACNB3-217ENST00000550483 OR56A1Q8NGH5 318 aa11.89□□□□□ -0.51
CACNB3-217ENST00000550483 NCSTNQ92542 709 aa11.89□□□□□ -0.51
CACNB3-217ENST00000550483 FIG4Q92562 907 aa11.89□□□□□ -0.51
CACNB3-217ENST00000550483 N4BP2L2Q92802 583 aaPredicted RBP11.89□□□□□ -0.51
CACNB3-217ENST00000550483 TANKQ92844 425 aa11.89□□□□□ -0.51
CACNB3-217ENST00000550483 CIDECQ96AQ7 238 aaPredicted RBP11.89□□□□□ -0.51
CACNB3-217ENST00000550483 EXOSC8Q96B26 276 aaKnown RBP11.89□□□□□ -0.51
CACNB3-217ENST00000550483 MVB12AQ96EY5 273 aa11.89□□□□□ -0.51
CACNB3-217ENST00000550483 MAP3K3Q99759 626 aa11.89□□□□□ -0.51
CACNB3-217ENST00000550483 KLHL4Q9C0H6 718 aa11.89□□□□□ -0.51
CACNB3-217ENST00000550483 ZMYND15Q9H091 742 aa11.89□□□□□ -0.51
CACNB3-217ENST00000550483 CHST8Q9H2A9 424 aa11.89□□□□□ -0.51
CACNB3-217ENST00000550483 IKZF5Q9H5V7 419 aa11.89□□□□□ -0.51
CACNB3-217ENST00000550483 RPF2Q9H7B2 306 aaKnown RBP11.89□□□□□ -0.51
CACNB3-217ENST00000550483 C3orf14Q9HBI5 128 aa11.89□□□□□ -0.51
CACNB3-217ENST00000550483 CAPN10Q9HC96 672 aa11.89□□□□□ -0.51
CACNB3-217ENST00000550483 TMEM74BQ9NUR3 256 aa11.89□□□□□ -0.51
CACNB3-217ENST00000550483 FBXW2Q9UKT8 454 aa11.89□□□□□ -0.51
CACNB3-217ENST00000550483 FAF1Q9UNN5 650 aaPredicted RBP11.89□□□□□ -0.51
CACNB3-217ENST00000550483 MRPS33Q9Y291 106 aaKnown RBP11.89□□□□□ -0.51
CACNB3-217ENST00000550483 ATG4BQ9Y4P1 393 aa11.89□□□□□ -0.51
CACNB3-217ENST00000550483 LOC105369274A0A096LPK9 316 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 LOC102723532A0A0G2JNH3 316 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 FITM1A5D6W6 292 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 C4orf51C9J302 202 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 H0YJX3 145 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 P2RX6O15547 441 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 CREG1O75629 220 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 SOX30O94993 753 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 KCNK5O95279 499 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 CAPNS1P04632 268 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 CFIP05156 583 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 EIF2S1P05198 315 aaKnown RBP11.88□□□□□ -0.51
CACNB3-217ENST00000550483 ZNF883P0CG24 379 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 GIMD1P0DJR0 217 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 ALDH4A1P30038 563 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 GPC1P35052 558 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 HSPA13P48723 471 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 ATXN3P54252 364 aaPredicted RBP11.88□□□□□ -0.51
CACNB3-217ENST00000550483 LIM2P55344 173 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 RAB38P57729 211 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 HSD11B2P80365 405 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 PRR5P85299 388 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 BNIP3Q12983 259 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 BIKQ13323 160 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 GNA13Q14344 377 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 TRIP10Q15642 601 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 FAM214AQ32MH5 1076 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 SPDYE7PQ495Y7 208 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 DEFB134Q4QY38 66 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 OGFRL1Q5TC84 451 aaPredicted RBP11.88□□□□□ -0.51
CACNB3-217ENST00000550483 SAXO2Q658L1 398 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 OR4N4Q8N0Y3 316 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 ZCCHC10Q8TBK6 192 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 CANT1Q8WVQ1 401 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 PPWD1Q96BP3 646 aaKnown RBP11.88□□□□□ -0.51
CACNB3-217ENST00000550483 AURKBQ96GD4 344 aaPredicted RBP11.88□□□□□ -0.51
CACNB3-217ENST00000550483 AMDHD1Q96NU7 426 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 TGM7Q96PF1 710 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 FCRL4Q96PJ5 515 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 TRIM8Q9BZR9 551 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 FANCEQ9HB96 536 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 IL21RQ9HBE5 538 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 DCAF13Q9NV06 445 aaKnown RBP11.88□□□□□ -0.51
CACNB3-217ENST00000550483 SOHLH2Q9NX45 425 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 RIMS3Q9UJD0 308 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 CES1P1Q9UKY3 287 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 AURKCQ9UQB9 309 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 ANGPT4Q9Y264 503 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 C15orf41Q9Y2V0 281 aa11.88□□□□□ -0.51
CACNB3-217ENST00000550483 TNRC6BQ9UPQ9 1833 aaKnown RBP11.88□□□□□ -0.51
CACNB3-217ENST00000550483 A0A0G2JN53 185 aa11.87□□□□□ -0.51
CACNB3-217ENST00000550483 H0YIG0 161 aa11.87□□□□□ -0.51
CACNB3-217ENST00000550483 ARHGAP33O14559 1287 aa11.87□□□□□ -0.51
CACNB3-217ENST00000550483 DEAF1O75398 565 aaPredicted RBP11.87□□□□□ -0.51
CACNB3-217ENST00000550483 TNFRSF21O75509 655 aa11.87□□□□□ -0.51
CACNB3-217ENST00000550483 PDE9AO76083 593 aa11.87□□□□□ -0.51
CACNB3-217ENST00000550483 NSA2O95478 260 aaKnown RBP11.87□□□□□ -0.51
CACNB3-217ENST00000550483 AGR2O95994 175 aa11.87□□□□□ -0.51
CACNB3-217ENST00000550483 ANKRD34CP0C6C1 535 aa11.87□□□□□ -0.51
CACNB3-217ENST00000550483 NCK1P16333 377 aa11.87□□□□□ -0.51
CACNB3-217ENST00000550483 CRATP43155 626 aa11.87□□□□□ -0.51
CACNB3-217ENST00000550483 AVPR1BP47901 424 aa11.87□□□□□ -0.51
CACNB3-217ENST00000550483 PRIM2P49643 509 aa11.87□□□□□ -0.51
CACNB3-217ENST00000550483 NCBP2P52298 156 aaKnown RBP eCLIP11.87□□□□□ -0.51
CACNB3-217ENST00000550483 SRSF5Q13243 272 aaKnown RBP11.87□□□□□ -0.51
CACNB3-217ENST00000550483 TMEM71Q6P5X7 295 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms