RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 SMG7Q92540 1137 aaKnown RBP11.56□□□□□ -0.56
VDR-208ENST00000550325 AP2M1Q96CW1 435 aa11.56□□□□□ -0.56
VDR-208ENST00000550325 LRR1Q96L50 414 aa11.56□□□□□ -0.56
VDR-208ENST00000550325 CCSER2Q9H7U1 834 aa11.56□□□□□ -0.56
VDR-208ENST00000550325 DICER1Q9UPY3 1922 aaKnown RBP11.56□□□□□ -0.56
VDR-208ENST00000550325 CHP2O43745 196 aa11.56□□□□□ -0.56
VDR-208ENST00000550325 ACLYP53396 1101 aa11.56□□□□□ -0.56
VDR-208ENST00000550325 WNT3P56703 355 aa11.56□□□□□ -0.56
VDR-208ENST00000550325 CDK6Q00534 326 aa11.56□□□□□ -0.56
VDR-208ENST00000550325 XKR4Q5GH76 650 aa11.56□□□□□ -0.56
VDR-208ENST00000550325 TMEM81Q6P7N7 255 aa11.56□□□□□ -0.56
VDR-208ENST00000550325 NANOGP1Q8N7R0 232 aa11.56□□□□□ -0.56
VDR-208ENST00000550325 UFD1Q92890 307 aa11.56□□□□□ -0.56
VDR-208ENST00000550325 RBPMSQ93062 196 aaKnown RBP11.56□□□□□ -0.56
VDR-208ENST00000550325 C12orf66Q96MD2 445 aa11.56□□□□□ -0.56
VDR-208ENST00000550325 PIGUQ9H490 435 aa11.56□□□□□ -0.56
VDR-208ENST00000550325 RANBP3Q9H6Z4 567 aaPredicted RBP11.56□□□□□ -0.56
VDR-208ENST00000550325 ENAMQ9NRM1 1142 aa11.56□□□□□ -0.56
VDR-208ENST00000550325 HCN3Q9P1Z3 774 aa11.56□□□□□ -0.56
VDR-208ENST00000550325 VPS29Q9UBQ0 182 aa11.56□□□□□ -0.56
VDR-208ENST00000550325 ENOPH1Q9UHY7 261 aa11.56□□□□□ -0.56
VDR-208ENST00000550325 EXO1Q9UQ84 846 aaKnown RBP11.56□□□□□ -0.56
VDR-208ENST00000550325 FCF1Q9Y324 198 aaKnown RBP11.56□□□□□ -0.56
VDR-208ENST00000550325 C2orf78A6NCI8 922 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 TRIM77I1YAP6 450 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 TRIM3O75382 744 aaPredicted RBP11.55□□□□□ -0.56
VDR-208ENST00000550325 PROS1P07225 676 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 ACADMP11310 421 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 ALDH9A1P49189 494 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 CPT1AP50416 773 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 AGFG1P52594 562 aaKnown RBP11.55□□□□□ -0.56
VDR-208ENST00000550325 LIMK1P53667 647 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 RHOAP61586 193 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 MLLT11Q13015 90 aaPredicted RBP11.55□□□□□ -0.56
VDR-208ENST00000550325 GPR176Q14439 515 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 UPP1Q16831 310 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 MPPE1Q53F39 396 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 ZNF730Q6ZMV8 503 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 SDR16C5Q8N3Y7 309 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 SRFBP1Q8NEF9 429 aaKnown RBP11.55□□□□□ -0.56
VDR-208ENST00000550325 NEIL3Q8TAT5 605 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 SLC9A6Q92581 669 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 TMEM43Q9BTV4 400 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 NLNQ9BYT8 704 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 FAM120CQ9NX05 1096 aaKnown RBP11.55□□□□□ -0.56
VDR-208ENST00000550325 LINC00862A6NCI5 91 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 LGALS8O00214 317 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 SEPT4O43236 478 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 EPORP19235 508 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 RPS12P25398 132 aaKnown RBP11.55□□□□□ -0.56
VDR-208ENST00000550325 SOX18P35713 384 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 ADAM15Q13444 863 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 GRM7Q14831 915 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 NTRK2Q16620 822 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 UBE2Q1Q7Z7E8 422 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 CLDN22Q8N7P3 220 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 LHFPL5Q8TAF8 219 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 GEMIN6Q8WXD5 167 aaKnown RBP11.55□□□□□ -0.56
VDR-208ENST00000550325 ZFP3Q96NJ6 502 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 PSKH2Q96QS6 385 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 SERHL2Q9H4I8 314 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 KLHL1Q9NR64 748 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 ELF5Q9UKW6 265 aaPredicted RBP11.55□□□□□ -0.56
VDR-208ENST00000550325 BAIAP2Q9UQB8 552 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 PRAMEF25A6NGN4 478 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 ZAR1LA6NP61 321 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 M0R233 179 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 B4GALT3O60512 393 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 CFDP00746 253 aaPredicted RBP11.55□□□□□ -0.56
VDR-208ENST00000550325 TYMPP19971 482 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 DRD5P21918 477 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 XPAP23025 273 aaPredicted RBP11.55□□□□□ -0.56
VDR-208ENST00000550325 STK19P49842 368 aaPredicted RBP11.55□□□□□ -0.56
VDR-208ENST00000550325 ATP12AP54707 1039 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 FABP5Q01469 135 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 ABRQ12979 859 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 EIF4EBP2Q13542 120 aaPredicted RBP11.55□□□□□ -0.56
VDR-208ENST00000550325 DCST1Q5T197 706 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 TNFAIP8L2Q6P589 184 aaPredicted RBP11.55□□□□□ -0.56
VDR-208ENST00000550325 FTMTQ8N4E7 242 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 ZNF366Q8N895 744 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 LSM14AQ8ND56 463 aaKnown RBP11.55□□□□□ -0.56
VDR-208ENST00000550325 COQ8AQ8NI60 647 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 RNFT2Q96EX2 444 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 MGME1Q9BQP7 344 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 KCNN2Q9H2S1 579 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 SESN1Q9Y6P5 492 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 PDCD11Q14690 1871 aaKnown RBP11.55□□□□□ -0.56
VDR-208ENST00000550325 CCDC88CQ9P219 2028 aa11.55□□□□□ -0.56
VDR-208ENST00000550325 CHURC1-FNTBB4DL54 471 aa11.54□□□□□ -0.56
VDR-208ENST00000550325 MTRF1O75570 445 aaKnown RBP11.54□□□□□ -0.56
VDR-208ENST00000550325 GCM2O75603 506 aaPredicted RBP11.54□□□□□ -0.56
VDR-208ENST00000550325 CLDN7O95471 211 aa11.54□□□□□ -0.56
VDR-208ENST00000550325 NUP62P37198 522 aaPredicted RBP11.54□□□□□ -0.56
VDR-208ENST00000550325 CHRNA6Q15825 494 aa11.54□□□□□ -0.56
VDR-208ENST00000550325 IER5LQ5T953 404 aa11.54□□□□□ -0.56
VDR-208ENST00000550325 RNF219Q5W0B1 726 aaPredicted RBP11.54□□□□□ -0.56
VDR-208ENST00000550325 MZT2AQ6P582 158 aa11.54□□□□□ -0.56
VDR-208ENST00000550325 C19orf48Q6RUI8 117 aa11.54□□□□□ -0.56
VDR-208ENST00000550325 ZNF782Q6ZMW2 699 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms