RNA–Protein interactions for RNA: ENST00000549490.1

UBE2N-203, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2

Gene UBE2N, Length 676 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-203ENST00000549490 DUPD1Q68J44 220 aa8.13□□□□□ -1.11
UBE2N-203ENST00000549490 ZNF470Q6ECI4 717 aa8.13□□□□□ -1.11
UBE2N-203ENST00000549490 UGT3A1Q6NUS8 523 aa8.13□□□□□ -1.11
UBE2N-203ENST00000549490 PLXDC2Q6UX71 529 aa8.13□□□□□ -1.11
UBE2N-203ENST00000549490 DENND6AQ8IWF6 608 aa8.13□□□□□ -1.11
UBE2N-203ENST00000549490 C9orf40Q8IXQ3 194 aa8.13□□□□□ -1.11
UBE2N-203ENST00000549490 GCNT2Q8N0V5 402 aa8.13□□□□□ -1.11
UBE2N-203ENST00000549490 SLC15A4Q8N697 577 aa8.13□□□□□ -1.11
UBE2N-203ENST00000549490 NUBPLQ8TB37 319 aa8.13□□□□□ -1.11
UBE2N-203ENST00000549490 EEF1AKMT1Q8WVE0 214 aa8.13□□□□□ -1.11
UBE2N-203ENST00000549490 ABTB1Q969K4 478 aaPredicted RBP8.13□□□□□ -1.11
UBE2N-203ENST00000549490 GAL3ST3Q96A11 431 aa8.13□□□□□ -1.11
UBE2N-203ENST00000549490 ANKRD9Q96BM1 317 aaPredicted RBP8.13□□□□□ -1.11
UBE2N-203ENST00000549490 ZNF597Q96LX8 424 aa8.13□□□□□ -1.11
UBE2N-203ENST00000549490 TSNARE1Q96NA8 513 aa8.13□□□□□ -1.11
UBE2N-203ENST00000549490 ZFP3Q96NJ6 502 aa8.13□□□□□ -1.11
UBE2N-203ENST00000549490 QRFPRQ96P65 431 aa8.13□□□□□ -1.11
UBE2N-203ENST00000549490 GNRHR2Q96P88 292 aa8.13□□□□□ -1.11
UBE2N-203ENST00000549490 TUBA1CQ9BQE3 449 aa8.13□□□□□ -1.11
UBE2N-203ENST00000549490 MED18Q9BUE0 208 aa8.13□□□□□ -1.11
UBE2N-203ENST00000549490 RBSNQ9H1K0 784 aa8.13□□□□□ -1.11
UBE2N-203ENST00000549490 CCDC68Q9H2F9 335 aa8.13□□□□□ -1.11
UBE2N-203ENST00000549490 CXorf56Q9H5V9 222 aa8.13□□□□□ -1.11
UBE2N-203ENST00000549490 EIF2B3Q9NR50 452 aaKnown RBP8.13□□□□□ -1.11
UBE2N-203ENST00000549490 COPS7AQ9UBW8 275 aa8.13□□□□□ -1.11
UBE2N-203ENST00000549490 PACSIN3Q9UKS6 424 aa8.13□□□□□ -1.11
UBE2N-203ENST00000549490 SOX13Q9UN79 622 aa8.13□□□□□ -1.11
UBE2N-203ENST00000549490 IKBKGQ9Y6K9 419 aa8.13□□□□□ -1.11
UBE2N-203ENST00000549490 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.12□□□□□ -1.116e-8■■■■□ 24.1
UBE2N-203ENST00000549490 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.12□□□□□ -1.11
UBE2N-203ENST00000549490 ANKRD33BA6NCL7 494 aa8.12□□□□□ -1.11
UBE2N-203ENST00000549490 GOLGA6L19H0YKK7 550 aa8.12□□□□□ -1.11
UBE2N-203ENST00000549490 MSTNO14793 375 aa8.12□□□□□ -1.11
UBE2N-203ENST00000549490 ERI3O43414 337 aaKnown RBP8.12□□□□□ -1.11
UBE2N-203ENST00000549490 B3GALT2O43825 422 aa8.12□□□□□ -1.11
UBE2N-203ENST00000549490 TNFSF13O75888 250 aa8.12□□□□□ -1.11
UBE2N-203ENST00000549490 IGKV3-11P04433 115 aa8.12□□□□□ -1.11
UBE2N-203ENST00000549490 TPM3P06753 285 aa8.12□□□□□ -1.11
UBE2N-203ENST00000549490 TPM1P09493 284 aa8.12□□□□□ -1.11
UBE2N-203ENST00000549490 CYP4B1P13584 511 aa8.12□□□□□ -1.11
UBE2N-203ENST00000549490 HNRNPH1P31943 449 aaKnown RBP8.12□□□□□ -1.11
UBE2N-203ENST00000549490 PCYT1AP49585 367 aa8.12□□□□□ -1.11
UBE2N-203ENST00000549490 NAGLUP54802 743 aa8.12□□□□□ -1.11
UBE2N-203ENST00000549490 LIM2P55344 173 aa8.12□□□□□ -1.11
UBE2N-203ENST00000549490 TIAL1Q01085 375 aaKnown RBP eCLIP8.12□□□□□ -1.11
UBE2N-203ENST00000549490 ID2Q02363 134 aa8.12□□□□□ -1.11
UBE2N-203ENST00000549490 SP140Q13342 867 aa8.12□□□□□ -1.11
UBE2N-203ENST00000549490 SERTAD2Q14140 314 aa8.12□□□□□ -1.11
UBE2N-203ENST00000549490 EFTUD2Q15029 972 aaKnown RBP eCLIP8.12□□□□□ -1.119e-9■■□□□ 13
UBE2N-203ENST00000549490 FNDC7Q5VTL7 733 aa8.12□□□□□ -1.11
UBE2N-203ENST00000549490 BICRALQ6AI39 1079 aa8.12□□□□□ -1.11
UBE2N-203ENST00000549490 NXPE4Q6UWF7 544 aa8.12□□□□□ -1.11
UBE2N-203ENST00000549490 C22orf34Q6ZV56 151 aa8.12□□□□□ -1.11
UBE2N-203ENST00000549490 ADGRE4PQ86SQ3 457 aa8.12□□□□□ -1.11
UBE2N-203ENST00000549490 KIAA1328Q86T90 577 aa8.12□□□□□ -1.11
UBE2N-203ENST00000549490 PALM2Q8IXS6 379 aa8.12□□□□□ -1.11
UBE2N-203ENST00000549490 KLHDC8AQ8IYD2 350 aa8.12□□□□□ -1.11
UBE2N-203ENST00000549490 DND1Q8IYX4 353 aaKnown RBP8.12□□□□□ -1.11
UBE2N-203ENST00000549490 LRRC57Q8N9N7 239 aa8.12□□□□□ -1.11
UBE2N-203ENST00000549490 WNT2BQ93097 391 aa8.12□□□□□ -1.11
UBE2N-203ENST00000549490 MS4A6EQ96DS6 147 aa8.12□□□□□ -1.11
UBE2N-203ENST00000549490 ZBED6CLQ96FA7 236 aaPredicted RBP8.12□□□□□ -1.11
UBE2N-203ENST00000549490 SENP5Q96HI0 755 aaPredicted RBP8.12□□□□□ -1.11
UBE2N-203ENST00000549490 TM9SF2Q99805 663 aa8.12□□□□□ -1.11
UBE2N-203ENST00000549490 AIF1LQ9BQI0 150 aa8.12□□□□□ -1.11
UBE2N-203ENST00000549490 PELI2Q9HAT8 420 aa8.12□□□□□ -1.11
UBE2N-203ENST00000549490 ARL15Q9NXU5 204 aa8.12□□□□□ -1.11
UBE2N-203ENST00000549490 PAK5Q9P286 719 aa8.12□□□□□ -1.11
UBE2N-203ENST00000549490 C15orf41Q9Y2V0 281 aa8.12□□□□□ -1.11
UBE2N-203ENST00000549490 EML6Q6ZMW3 1958 aa8.11□□□□□ -1.11
UBE2N-203ENST00000549490 LRIT2A6NDA9 550 aa8.11□□□□□ -1.11
UBE2N-203ENST00000549490 HRKO00198 91 aa8.11□□□□□ -1.11
UBE2N-203ENST00000549490 AP3B1O00203 1094 aa8.11□□□□□ -1.11
UBE2N-203ENST00000549490 TMCC2O75069 709 aa8.11□□□□□ -1.11
UBE2N-203ENST00000549490 LDB3O75112 727 aa8.11□□□□□ -1.11
UBE2N-203ENST00000549490 HIST1H2AGP0C0S8 130 aaPredicted RBP8.11□□□□□ -1.11
UBE2N-203ENST00000549490 CPN1P15169 458 aa8.11□□□□□ -1.11
UBE2N-203ENST00000549490 HIST1H2ADP20671 130 aa8.11□□□□□ -1.11
UBE2N-203ENST00000549490 CERS1P27544 350 aa8.11□□□□□ -1.11
UBE2N-203ENST00000549490 SERPINB3P29508 390 aa8.11□□□□□ -1.11
UBE2N-203ENST00000549490 CCKARP32238 428 aa8.11□□□□□ -1.11
UBE2N-203ENST00000549490 UGT2B10P36537 528 aa8.11□□□□□ -1.11
UBE2N-203ENST00000549490 CD79BP40259 229 aa8.11□□□□□ -1.11
UBE2N-203ENST00000549490 MSH2P43246 934 aa8.11□□□□□ -1.11
UBE2N-203ENST00000549490 RPL21P46778 160 aaKnown RBP8.11□□□□□ -1.11
UBE2N-203ENST00000549490 RGS4P49798 205 aa8.11□□□□□ -1.11
UBE2N-203ENST00000549490 PLA2G16P53816 162 aa8.11□□□□□ -1.11
UBE2N-203ENST00000549490 NAP1L1P55209 391 aaKnown RBP8.11□□□□□ -1.11
UBE2N-203ENST00000549490 EEF1A1P68104 462 aaKnown RBP8.11□□□□□ -1.11
UBE2N-203ENST00000549490 SRSF2Q01130 221 aaKnown RBP8.11□□□□□ -1.11
UBE2N-203ENST00000549490 GAB1Q13480 694 aa8.11□□□□□ -1.11
UBE2N-203ENST00000549490 TOMM20Q15388 145 aa8.11□□□□□ -1.11
UBE2N-203ENST00000549490 NTRK2Q16620 822 aa8.11□□□□□ -1.11
UBE2N-203ENST00000549490 TBCELQ5QJ74 424 aa8.11□□□□□ -1.11
UBE2N-203ENST00000549490 EEF1A1P5Q5VTE0 462 aa8.11□□□□□ -1.11
UBE2N-203ENST00000549490 LRRC8EQ6NSJ5 796 aa8.11□□□□□ -1.11
UBE2N-203ENST00000549490 ZNF474Q6S9Z5 364 aaPredicted RBP8.11□□□□□ -1.11
UBE2N-203ENST00000549490 ZNF550Q7Z398 422 aa8.11□□□□□ -1.11
UBE2N-203ENST00000549490 TMPRSS11BQ86T26 416 aa8.11□□□□□ -1.11
UBE2N-203ENST00000549490 VSTM4Q8IW00 320 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms