RNA–Protein interactions for RNA: ENST00000547825.5

LIMA1-203, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-203ENST00000547825 PRG2P13727 222 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 HSD17B1P14061 328 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 PFKLP17858 780 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 C4BPBP20851 252 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 WARSP23381 471 aaKnown RBP5.25□□□□□ -1.57
LIMA1-203ENST00000547825 SDC2P34741 201 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 STARP49675 285 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 TUBA1BP68363 451 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 SRSF2Q01130 221 aaKnown RBP5.25□□□□□ -1.57
LIMA1-203ENST00000547825 C2orf80Q0P641 193 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 GALNT2Q10471 571 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 DUSP4Q13115 394 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 ADPRMQ3LIE5 342 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 GPAT3Q53EU6 434 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 FAAH2Q6GMR7 532 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 C22orf42Q6IC83 251 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 TUBA1AQ71U36 451 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 DCP2Q8IU60 420 aaKnown RBP5.25□□□□□ -1.57
LIMA1-203ENST00000547825 CYP4Z2PQ8N1L4 340 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 METTL4Q8N3J2 472 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 HJURPQ8NCD3 748 aaPredicted RBP5.25□□□□□ -1.57
LIMA1-203ENST00000547825 PPP1R35Q8TAP8 253 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 DEDD2Q8WXF8 326 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 IRGQQ8WZA9 623 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 FAM46AQ96IP4 442 aaKnown RBP5.25□□□□□ -1.57
LIMA1-203ENST00000547825 TEX37Q96LM6 180 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 BBS4Q96RK4 519 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 SMOQ99835 787 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 TTTY10Q9BZA0 68 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 CD244Q9BZW8 370 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 OR2B2Q9GZK3 357 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 POLR2J3Q9H1A7 115 aaKnown RBP5.25□□□□□ -1.57
LIMA1-203ENST00000547825 GSTO2Q9H4Y5 243 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 SGK2Q9HBY8 427 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 SEMA3GQ9NS98 782 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 FARSBQ9NSD9 589 aaKnown RBP5.25□□□□□ -1.57
LIMA1-203ENST00000547825 DUX4Q9UBX2 424 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 SEC14L3Q9UDX4 400 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 INTS6Q9UL03 887 aaKnown RBP5.25□□□□□ -1.57
LIMA1-203ENST00000547825 FZD4Q9ULV1 537 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 SLC22A14Q9Y267 594 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 NOX1Q9Y5S8 564 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 ACTL7AQ9Y615 435 aa5.25□□□□□ -1.57
LIMA1-203ENST00000547825 LAMA1P25391 3075 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 A0A1W2PPK0 400 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 TMEM221A6NGB7 291 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 ADAMDEC1O15204 470 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 CCNB2O95067 398 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 PLATP00750 562 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 IFNW1P05000 195 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 DARSP14868 501 aaKnown RBP5.24□□□□□ -1.57
LIMA1-203ENST00000547825 ITGA2P17301 1181 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 FPR1P21462 350 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 HTR1EP28566 365 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 CD52P31358 61 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 FNTBP49356 437 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 MANFP55145 182 aaKnown RBP5.24□□□□□ -1.57
LIMA1-203ENST00000547825 DNAJB13P59910 316 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 RHAGQ02094 409 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 CREMQ03060 361 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 NPRL3Q12980 569 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 USP41Q3LFD5 358 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 TIGD5Q53EQ6 642 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 TUBA3EQ6PEY2 450 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 FAM180AQ6UWF9 173 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 CYS1Q717R9 158 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 LARP4Q71RC2 724 aaKnown RBP eCLIP5.24□□□□□ -1.57
LIMA1-203ENST00000547825 AQP11Q8NBQ7 271 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 ZBTB34Q8NCN2 500 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 OR13F1Q8NGS4 319 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 RHOXF1Q8NHV9 184 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 TADA1Q96BN2 335 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 PPCDCQ96CD2 204 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 RACGAP1Q9H0H5 632 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 TAS2R16Q9NYV7 291 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 PRR13Q9NZ81 148 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 TRPM5Q9NZQ8 1165 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 GULP1Q9UBP9 304 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 YBX2Q9Y2T7 364 aaKnown RBP5.24□□□□□ -1.57
LIMA1-203ENST00000547825 INMT-MINDY4F8WBC2 141 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 SMLR1H3BR10 107 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 DCLK1O15075 740 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 TEX28O15482 410 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 IL7P13232 177 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 CD1DP15813 335 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 ATP5C1P36542 298 aaKnown RBP5.24□□□□□ -1.57
LIMA1-203ENST00000547825 MAGEA12P43365 314 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 ZNF45Q02386 682 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 MAB21L1Q13394 359 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 TESK1Q15569 626 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 AAK1Q2M2I8 961 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 DCST1Q5T197 706 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 LRRC66Q68CR7 880 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 BICRALQ6AI39 1079 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 RETSATQ6NUM9 610 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 MTFR2Q6P444 385 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 GOLGA7Q7Z5G4 137 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 CLEC14AQ86T13 490 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 COLGALT2Q8IYK4 626 aa5.24□□□□□ -1.57
LIMA1-203ENST00000547825 TMEM86AQ8N2M4 240 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms