RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 MED16Q9Y2X0 877 aa8.54□□□□□ -1.04
SSH1-205ENST00000546812 COMMD10Q9Y6G5 202 aa8.54□□□□□ -1.04
SSH1-205ENST00000546812 CUBNO60494 3623 aa8.53□□□□□ -1.04
SSH1-205ENST00000546812 AHRRA9YTQ3 701 aa8.53□□□□□ -1.04
SSH1-205ENST00000546812 POC1B-GALNT4F8VUJ3 575 aa8.53□□□□□ -1.04
SSH1-205ENST00000546812 GFYI3L273 518 aa8.53□□□□□ -1.04
SSH1-205ENST00000546812 CLDN4O14493 209 aa8.53□□□□□ -1.04
SSH1-205ENST00000546812 PRKNO60260 465 aaPredicted RBP8.53□□□□□ -1.04
SSH1-205ENST00000546812 B3GALT4O96024 378 aa8.53□□□□□ -1.04
SSH1-205ENST00000546812 F12P00748 615 aaPredicted RBP8.53□□□□□ -1.04
SSH1-205ENST00000546812 IFNA2P01563 188 aa8.53□□□□□ -1.04
SSH1-205ENST00000546812 IL2RAP01589 272 aa8.53□□□□□ -1.04
SSH1-205ENST00000546812 IMPA1P29218 277 aa8.53□□□□□ -1.04
SSH1-205ENST00000546812 GRK3P35626 688 aa8.53□□□□□ -1.04
SSH1-205ENST00000546812 HSD17B3P37058 310 aa8.53□□□□□ -1.04
SSH1-205ENST00000546812 SOX3P41225 446 aa8.53□□□□□ -1.04
SSH1-205ENST00000546812 ZNF136P52737 540 aa8.53□□□□□ -1.04
SSH1-205ENST00000546812 TIAL1Q01085 375 aaKnown RBP eCLIP8.53□□□□□ -1.04
SSH1-205ENST00000546812 PWP1Q13610 501 aa8.53□□□□□ -1.04
SSH1-205ENST00000546812 SLC29A2Q14542 456 aa8.53□□□□□ -1.04
SSH1-205ENST00000546812 ZNF460Q14592 562 aa8.53□□□□□ -1.04
SSH1-205ENST00000546812 TTLL9Q3SXZ7 439 aa8.53□□□□□ -1.04
SSH1-205ENST00000546812 PODNL1Q6PEZ8 512 aa8.53□□□□□ -1.04
SSH1-205ENST00000546812 RTL4Q6ZR62 310 aa8.53□□□□□ -1.04
SSH1-205ENST00000546812 FAM47EQ6ZV65 393 aa8.53□□□□□ -1.04
SSH1-205ENST00000546812 CYS1Q717R9 158 aa8.53□□□□□ -1.04
SSH1-205ENST00000546812 CPNE9Q8IYJ1 553 aa8.53□□□□□ -1.04
SSH1-205ENST00000546812 GOLM1Q8NBJ4 401 aa8.53□□□□□ -1.04
SSH1-205ENST00000546812 CD200R1Q8TD46 325 aa8.53□□□□□ -1.04
SSH1-205ENST00000546812 ASB11Q8WXH4 323 aa8.53□□□□□ -1.04
SSH1-205ENST00000546812 KCNJ9Q92806 393 aa8.53□□□□□ -1.04
SSH1-205ENST00000546812 NCLNQ969V3 563 aa8.53□□□□□ -1.04
SSH1-205ENST00000546812 KIAA1191Q96A73 305 aa8.53□□□□□ -1.04
SSH1-205ENST00000546812 SCYL1Q96KG9 808 aa8.53□□□□□ -1.04
SSH1-205ENST00000546812 SGCZQ96LD1 299 aa8.53□□□□□ -1.04
SSH1-205ENST00000546812 RASL10BQ96S79 203 aa8.53□□□□□ -1.04
SSH1-205ENST00000546812 MCMBPQ9BTE3 642 aa8.53□□□□□ -1.04
SSH1-205ENST00000546812 PCBD2Q9H0N5 130 aa8.53□□□□□ -1.04
SSH1-205ENST00000546812 CAB39LQ9H9S4 337 aa8.53□□□□□ -1.04
SSH1-205ENST00000546812 SEMA4BQ9NPR2 832 aaPredicted RBP8.53□□□□□ -1.04
SSH1-205ENST00000546812 CCDC177Q9NQR7 707 aaPredicted RBP8.53□□□□□ -1.04
SSH1-205ENST00000546812 SACM1LQ9NTJ5 587 aa8.53□□□□□ -1.04
SSH1-205ENST00000546812 TUBA8Q9NY65 449 aaPredicted RBP8.53□□□□□ -1.04
SSH1-205ENST00000546812 JKAMPQ9P055 326 aa8.53□□□□□ -1.04
SSH1-205ENST00000546812 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.53□□□□□ -1.04
SSH1-205ENST00000546812 ANK2Q01484 3957 aa8.53□□□□□ -1.04
SSH1-205ENST00000546812 MBD3L4A6NDZ8 208 aaPredicted RBP8.52□□□□□ -1.05
SSH1-205ENST00000546812 MBD3L5A6NJ08 208 aaPredicted RBP8.52□□□□□ -1.05
SSH1-205ENST00000546812 SMIM23A6NLE4 172 aa8.52□□□□□ -1.05
SSH1-205ENST00000546812 PSMD12O00232 456 aaPredicted RBP8.52□□□□□ -1.05
SSH1-205ENST00000546812 WWP2O00308 870 aa8.52□□□□□ -1.05
SSH1-205ENST00000546812 NDUFS4O43181 175 aa8.52□□□□□ -1.05
SSH1-205ENST00000546812 ZBTB14O43829 449 aa8.52□□□□□ -1.05
SSH1-205ENST00000546812 CNOT4O95628 575 aaKnown RBP8.52□□□□□ -1.05
SSH1-205ENST00000546812 SHBGP04278 402 aa8.52□□□□□ -1.05
SSH1-205ENST00000546812 INHBAP08476 426 aa8.52□□□□□ -1.05
SSH1-205ENST00000546812 ZNF888P0CJ79 500 aaPredicted RBP8.52□□□□□ -1.05
SSH1-205ENST00000546812 RNH1P13489 461 aaKnown RBP8.52□□□□□ -1.05
SSH1-205ENST00000546812 DNASE1L1P49184 302 aa8.52□□□□□ -1.05
SSH1-205ENST00000546812 WNT3P56703 355 aa8.52□□□□□ -1.05
SSH1-205ENST00000546812 TAS2R39P59534 338 aa8.52□□□□□ -1.05
SSH1-205ENST00000546812 TBPL1P62380 186 aa8.52□□□□□ -1.05
SSH1-205ENST00000546812 PDAP1Q13442 181 aaKnown RBP8.52□□□□□ -1.05
SSH1-205ENST00000546812 ACSF3Q4G176 576 aaPredicted RBP8.52□□□□□ -1.05
SSH1-205ENST00000546812 GRTP1Q5TC63 336 aa8.52□□□□□ -1.05
SSH1-205ENST00000546812 ABHD13Q7L211 337 aa8.52□□□□□ -1.05
SSH1-205ENST00000546812 PIWIL4Q7Z3Z4 852 aaKnown RBP8.52□□□□□ -1.05
SSH1-205ENST00000546812 LACC1Q8IV20 430 aa8.52□□□□□ -1.05
SSH1-205ENST00000546812 DCAKDQ8WVC6 231 aa8.52□□□□□ -1.05
SSH1-205ENST00000546812 SLC44A1Q8WWI5 657 aa8.52□□□□□ -1.05
SSH1-205ENST00000546812 ISL2Q96A47 359 aa8.52□□□□□ -1.05
SSH1-205ENST00000546812 LINGO1Q96FE5 620 aa8.52□□□□□ -1.05
SSH1-205ENST00000546812 PERPQ96FX8 193 aa8.52□□□□□ -1.05
SSH1-205ENST00000546812 GPR22Q99680 433 aa8.52□□□□□ -1.05
SSH1-205ENST00000546812 ACKR4Q9NPB9 350 aa8.52□□□□□ -1.05
SSH1-205ENST00000546812 PNO1Q9NRX1 252 aaKnown RBP8.52□□□□□ -1.05
SSH1-205ENST00000546812 TAS2R13Q9NYV9 303 aa8.52□□□□□ -1.05
SSH1-205ENST00000546812 SH2B3Q9UQQ2 575 aa8.52□□□□□ -1.05
SSH1-205ENST00000546812 EIF3LQ9Y262 564 aaKnown RBP8.52□□□□□ -1.05
SSH1-205ENST00000546812 MTO1Q9Y2Z2 717 aaKnown RBP8.52□□□□□ -1.05
SSH1-205ENST00000546812 ATG4BQ9Y4P1 393 aa8.52□□□□□ -1.05
SSH1-205ENST00000546812 MMACHCQ9Y4U1 282 aa8.52□□□□□ -1.05
SSH1-205ENST00000546812 IKBKGQ9Y6K9 419 aa8.52□□□□□ -1.05
SSH1-205ENST00000546812 SCN3AQ9NY46 2000 aa8.52□□□□□ -1.05
SSH1-205ENST00000546812 SH3D21A4FU49 640 aa8.51□□□□□ -1.05
SSH1-205ENST00000546812 KDM4EB2RXH2 506 aaPredicted RBP8.51□□□□□ -1.05
SSH1-205ENST00000546812 EEF1E1-BLOC1S5C9J1V9 151 aa8.51□□□□□ -1.05
SSH1-205ENST00000546812 CASKO14936 926 aa8.51□□□□□ -1.05
SSH1-205ENST00000546812 PHGDHO43175 533 aaKnown RBP8.51□□□□□ -1.05
SSH1-205ENST00000546812 CTIFO43310 598 aaKnown RBP8.51□□□□□ -1.05
SSH1-205ENST00000546812 EEF1E1O43324 174 aaKnown RBP8.51□□□□□ -1.05
SSH1-205ENST00000546812 P04436 131 aa8.51□□□□□ -1.05
SSH1-205ENST00000546812 TUBBP07437 444 aa8.51□□□□□ -1.05
SSH1-205ENST00000546812 CCL3P10147 92 aa8.51□□□□□ -1.05
SSH1-205ENST00000546812 CDH1P12830 882 aa8.51□□□□□ -1.05
SSH1-205ENST00000546812 CTSSP25774 331 aa8.51□□□□□ -1.05
SSH1-205ENST00000546812 GCAP28676 217 aa8.51□□□□□ -1.05
SSH1-205ENST00000546812 SPRP35270 261 aaPredicted RBP8.51□□□□□ -1.05
SSH1-205ENST00000546812 OPRM1P35372 400 aa8.51□□□□□ -1.05
SSH1-205ENST00000546812 GMPRP36959 345 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms