RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 ARHGEF33A8MVX0 844 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 BTN3A3O00478 584 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 TEX28O15482 410 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 SGTAO43765 313 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 KLK8O60259 260 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 SLC2A2P11168 524 aaPredicted RBP13.98□□□□□ -0.17
HOXC11-202ENST00000546378 XKP51811 444 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 SCN1BQ07699 218 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 C1DQ13901 141 aaKnown RBP13.98□□□□□ -0.17
HOXC11-202ENST00000546378 WSCD2Q2TBF2 565 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 IDNKQ5T6J7 187 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 TMEM220Q6QAJ8 160 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 CERS6Q6ZMG9 384 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 SYT9Q86SS6 491 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 PIK3R3Q92569 461 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 RNF31Q96EP0 1072 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 HRASLS5Q96KN8 279 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 LOC105369274A0A096LPK9 316 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 ZC3H12DA2A288 527 aaKnown RBP13.98□□□□□ -0.17
HOXC11-202ENST00000546378 FGF18O76093 207 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 SOD2P04179 222 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 RORCP51449 518 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 ITGA1P56199 1179 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 ZNF45Q02386 682 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 LMAN2Q12907 356 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 TATDN3Q17R31 274 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 ZNF750Q32MQ0 723 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 FAM209AQ5JX71 171 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 TECPR1Q7Z6L1 1165 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 IQCHQ86VS3 1027 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 OR4N4Q8N0Y3 316 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 OR7G3Q8NG95 312 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 EGLN3Q9H6Z9 239 aa13.98□□□□□ -0.17
HOXC11-202ENST00000546378 RALGAPA2Q2PPJ7 1873 aa13.97□□□□□ -0.17
HOXC11-202ENST00000546378 A0A1W2PRB8 838 aa13.97□□□□□ -0.17
HOXC11-202ENST00000546378 GAPDHSO14556 408 aaPredicted RBP13.97□□□□□ -0.17
HOXC11-202ENST00000546378 GNB5O14775 395 aa13.97□□□□□ -0.17
HOXC11-202ENST00000546378 ICMTO60725 284 aa13.97□□□□□ -0.17
HOXC11-202ENST00000546378 PTTG1O95997 202 aa13.97□□□□□ -0.17
HOXC11-202ENST00000546378 MRPL3P09001 348 aaKnown RBP13.97□□□□□ -0.17
HOXC11-202ENST00000546378 PTPN6P29350 595 aa13.97□□□□□ -0.17
HOXC11-202ENST00000546378 RPS25P62851 125 aaKnown RBP13.97□□□□□ -0.17
HOXC11-202ENST00000546378 DNAJB7Q7Z6W7 309 aaPredicted RBP13.97□□□□□ -0.17
HOXC11-202ENST00000546378 CMTM7Q96FZ5 175 aa13.97□□□□□ -0.17
HOXC11-202ENST00000546378 CNDP2Q96KP4 475 aaKnown RBP13.97□□□□□ -0.17
HOXC11-202ENST00000546378 OR2A14Q96R47 310 aa13.97□□□□□ -0.17
HOXC11-202ENST00000546378 GAL3ST1Q99999 423 aa13.97□□□□□ -0.17
HOXC11-202ENST00000546378 SPNS1Q9H2V7 528 aa13.97□□□□□ -0.17
HOXC11-202ENST00000546378 YIPF1Q9Y548 306 aa13.97□□□□□ -0.17
HOXC11-202ENST00000546378 SEC16AO15027 2179 aa13.97□□□□□ -0.17
HOXC11-202ENST00000546378 IGSF6O95976 241 aa13.97□□□□□ -0.17
HOXC11-202ENST00000546378 WNT3P56703 355 aa13.97□□□□□ -0.17
HOXC11-202ENST00000546378 SELENOWP63302 87 aa13.97□□□□□ -0.17
HOXC11-202ENST00000546378 TUBA1BP68363 451 aa13.97□□□□□ -0.17
HOXC11-202ENST00000546378 TUBA1AQ71U36 451 aa13.97□□□□□ -0.17
HOXC11-202ENST00000546378 IZUMO1Q8IYV9 350 aa13.97□□□□□ -0.17
HOXC11-202ENST00000546378 SLC39A11Q8N1S5 342 aa13.97□□□□□ -0.17
HOXC11-202ENST00000546378 Q8N402 240 aa13.97□□□□□ -0.17
HOXC11-202ENST00000546378 CSGALNACT1Q8TDX6 532 aa13.97□□□□□ -0.17
HOXC11-202ENST00000546378 FRMD6Q96NE9 622 aa13.97□□□□□ -0.17
HOXC11-202ENST00000546378 CRNNQ9UBG3 495 aaPredicted RBP13.97□□□□□ -0.17
HOXC11-202ENST00000546378 SPEF1Q9Y4P9 236 aa13.97□□□□□ -0.17
HOXC11-202ENST00000546378 TRBV23OR9-2A0A075B6M9 112 aa13.96□□□□□ -0.17
HOXC11-202ENST00000546378 CIB4A0PJX0 185 aa13.96□□□□□ -0.17
HOXC11-202ENST00000546378 CLDN24A6NM45 220 aa13.96□□□□□ -0.17
HOXC11-202ENST00000546378 GRXCR1A8MXD5 290 aa13.96□□□□□ -0.17
HOXC11-202ENST00000546378 H3BNC9 293 aa13.96□□□□□ -0.17
HOXC11-202ENST00000546378 CSO75390 466 aaKnown RBP13.96□□□□□ -0.17
HOXC11-202ENST00000546378 EIF2S1P05198 315 aaKnown RBP13.96□□□□□ -0.17
HOXC11-202ENST00000546378 NR2F1P10589 423 aa13.96□□□□□ -0.17
HOXC11-202ENST00000546378 MYOGP15173 224 aa13.96□□□□□ -0.17
HOXC11-202ENST00000546378 MYL12AP19105 171 aa13.96□□□□□ -0.17
HOXC11-202ENST00000546378 HTR7P34969 479 aa13.96□□□□□ -0.17
HOXC11-202ENST00000546378 CLCN4P51793 760 aa13.96□□□□□ -0.17
HOXC11-202ENST00000546378 SEC23BQ15437 767 aa13.96□□□□□ -0.17
HOXC11-202ENST00000546378 COMMD6Q7Z4G1 85 aa13.96□□□□□ -0.17
HOXC11-202ENST00000546378 OR52P1PQ8NH57 321 aa13.96□□□□□ -0.17
HOXC11-202ENST00000546378 REPS1Q96D71 796 aa13.96□□□□□ -0.17
HOXC11-202ENST00000546378 TRPS1Q9UHF7 1281 aa13.96□□□□□ -0.17
HOXC11-202ENST00000546378 SNX7Q9UNH6 387 aa13.96□□□□□ -0.17
HOXC11-202ENST00000546378 NTNG1Q9Y2I2 539 aa13.96□□□□□ -0.17
HOXC11-202ENST00000546378 HNRNPCL2B2RXH8 293 aa13.96□□□□□ -0.17
HOXC11-202ENST00000546378 I3L521 148 aa13.96□□□□□ -0.17
HOXC11-202ENST00000546378 CTNNB1P35222 781 aa13.96□□□□□ -0.17
HOXC11-202ENST00000546378 MAGEA11P43364 429 aa13.96□□□□□ -0.17
HOXC11-202ENST00000546378 RFX2P48378 723 aa13.96□□□□□ -0.17
HOXC11-202ENST00000546378 CRISP1P54107 249 aa13.96□□□□□ -0.17
HOXC11-202ENST00000546378 SRSF11Q05519 484 aaKnown RBP13.96□□□□□ -0.17
HOXC11-202ENST00000546378 NCF4Q15080 339 aa13.96□□□□□ -0.17
HOXC11-202ENST00000546378 MICAQ29983 383 aa13.96□□□□□ -0.17
HOXC11-202ENST00000546378 DCST1Q5T197 706 aa13.96□□□□□ -0.17
HOXC11-202ENST00000546378 TRIM46Q7Z4K8 759 aa13.96□□□□□ -0.17
HOXC11-202ENST00000546378 CRIPAKQ8N1N5 446 aa13.96□□□□□ -0.17
HOXC11-202ENST00000546378 FLCNQ8NFG4 579 aa13.96□□□□□ -0.17
HOXC11-202ENST00000546378 OR4F15Q8NGB8 312 aa13.96□□□□□ -0.17
HOXC11-202ENST00000546378 DEDD2Q8WXF8 326 aa13.96□□□□□ -0.17
HOXC11-202ENST00000546378 C7orf34Q96L11 122 aa13.96□□□□□ -0.17
HOXC11-202ENST00000546378 SDHCQ99643 169 aaPredicted RBP13.96□□□□□ -0.17
HOXC11-202ENST00000546378 OR2AG1Q9H205 316 aa13.96□□□□□ -0.17
HOXC11-202ENST00000546378 MVB12BQ9H7P6 319 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms